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Jack Baskin School of Engineering
Technology for a Changing World
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David Bernick
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Title
Assistant Adjunct Professor, Biomolecular Engineering
Lecturer, Biomolecular Engineering
Department
Biomolecular Engineering
Telephone Number
831-459-2061 (Office)
Office Location
Baskin Engineering, Room 269A
Office Hours
Wednesday, 10AM - 11AM, or by appointment
Mail Stop
SOE2
Research Areas
Biofuel production using reengineered extremophiles; next-generation sequencing applications including genome assembly, metagenome assembly and RNA transcriptomics; single-molecule sequencing of highly structured tRNA; novel halo virus discovery
Selected Publications
Complete genome sequence of Pyrobaculum oguniense
Comparative genomic and transcriptional analysis of CRISPR systems across the genus Pyrobaculum
Diversity of antisense and other non-coding RNAs in Archaea revealed by comparative small RNA sequencing in four Pyrobaculum species
Discovery of Pyrobaculum small RNA families with atypical pseudouridine guide features
Sequential Discovery – from small RNA to genomes, an investigation of the hyperthermophilic genus Pyrobaculum
Degree
Ph. D. in Bioinformatics and Biomolecular Engineering, 2010, UC Santa Cruz
Alumni
Josh L. Espinoza (Alumni)
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