Faculty
A
-
- Professor, Biomolecular Engineering
- Physical Sciences Bldg, Room 408
- DNA structure and dynamics, DNA sequencing, sequential analysis of single proteins, bioethics, nanopore technology, epigenetics
B
-
- Distinguished Research Professor
- Professor Emeritus, Biomolecular Engineering
- Baskin Distinguished Professor
- Physical Sciences Bldg, Room 405E
- Drug development
- Vaccines
- Biotechnology
- Monoclonal Antibody Therapeutics
- Immunology
- Molecular/Cell Biology
- Recombinant Protein Production
-
- Assistant Adjunct Professor, Biomolecular Engineering
- Lecturer, Biomolecular Engineering
- Baskin Engineering, Room 269A
- Biofuel production using reengineered extremophiles, especially halophiles; next-generation sequencing applications including genome assembly, metagenome assembly and RNA transcriptomics; extremozymes - viral / microbial gene discovery - RNA/RNA packing motors and porins; single-molecule sequencing of highly structured/modified tRNA; novel halo virus discovery
-
- Assistant Professor, Biomolecular Engineering
- computational biology, RNA splicing, genomics, cancer, high-throughput sequencing analysis
C
-
- Adjunct Professor, Biomolecular Engineering
- Regulation of innate and adaptive immunity, systems biology of human immune responses, development of novel vaccines and oligonucleotide-based drugs
-
- Assistant Professor, Biomolecular Engineering
- Physical and Biological Sciences Bldg, Room 316
- Population and evolutionary genomics, bioinformatics
D
-
- Research Professor, Biomolecular Engineering
- Physical Sciences Bldg, Room 405B
- Membrane biophysics, nanopore analysis of biopolymers, DNA sequencing, biomolecular self-assembly, liposomes
-
- Lecturer, Biomolecular Engineering
-
- Assistant Professor, Biomolecular Engineering
- 831-459-4833 (Office)
- 831-459-5157 (Lab)
- Office: Baskin Engineering, Room 259B
- Lab: Baskin Engineering, Room 292
- Protein engineering, structural biology, X-ray crystallography, biochemistry, biophysics, human viruses, vaccines, antiviral drugs
F
-
- Professor, Biomolecular Engineering
- Hematopoietic stem cells, transcriptional regulation, chromatin, blood cell development, cell surface receptors, genomics
G
-
- Associate Professor, Biomolecular Engineering
- Biomedical Sciences Bldg, Room 146
- Genomics
- computational biology
- genome assembly
- human evolution
- mRNA processing
- splicing
- ancient DNA
H
-
- Lecturer, Winter Quarter, BME 185
-
- Investigator, Howard Hughes Medical Institute
- Distinguished Professor, Biomolecular Engineering
- Scientific Director, UC Santa Cruz Genomics Institute
- Scientific Co-Director, California Institute for Quantitative Biosciences (QB3)
- 2300 Delaware, 280A
- PSB 405B
- Bioinformatics
- Genomics
- Computational genomic data analysis
- Molecular evolution and comparative genomics
- Genomic and clinical data sharing and standards
- Cancer genomics
- Neurodevelopment
- Stem cell research
- Immunogenomics
- Pattern recognition
- Machine learning
- Artificial intelligence
- Information theory
- Theoretical computer science
-
- Vice Provost and Dean of Undergraduate Education
- Professor, Computer Science and Engineering
- Professor, Biomolecular Engineering
- Bioinformatics, hidden Markov models, computer architecture, parallel computation
K
-
- Professor, Biomolecular Engineering
- Physical Sciences Bldg, Room 318
- Teaching introductory electronics, genome assembly from long-read data, nanopore signal processing, machine learning, and statistics, (formerly) protein structure prediction
-
- Assistant Professor of Biomolecular Engineering
- Biomedical Sciences - Room 446
- Noncoding RNAs in stem cells and cancer
L
-
- Professor, Biomolecular Engineering
- Physical Sciences Bldg, Room 320
- Computational and experimental non-coding RNA research
- Comparative transcriptomics
- RNA gene discovery (gene finders) and probabilistic modeling
- RNA-based gene regulation (antisense small RNAs, RNA-guided modification)
- Transfer RNA research - new functions and modes of regulation
- Role of RNA modification in regulation
- Alternative roles of non-coding RNAs (e.g., tRNA-derived small RNAs, piRNAs)
- Genomics of Archaea
- Evolutionary adaptation to extreme environments
- Small nucleolar RNA research
- Evolution of RNA gene familes
P
-
- Assistant Professor, Biomolecular Engineering
- Computational genomics, precision medicine and biomedical data sharing
-
- Professor, Biomolecular Engineering
- Baskin Engineering, Room 257A
- Bioelectronics, biosensors, chemosensors, nanotechnology, single cell characterization, sequencing, genotyping, pathogen detection, DNA fingerprinting
R
-
- Lecturer, Biomolecular Engineering
S
-
- Assistant Professor, Biomolecular Engineering
- Cell division cycle, cellular differentiation, cell fate decision, genome engineering, pluripotency, stem cells, transcription, chromatin
-
- Professor and Department Chair, Biomolecular Engineering
- Associate Director of CBSE for Cancer and Stem Cell Genomics
- Baskin Endowed Chair
- Physical Sciences Bldg, Room 308
- Computational genomics, computational systems biology, computational models for gene function prediction and regulation
T
-
- Rachel Carson College, administrative building, room 229
V
-
- Assistant Professor, Biomolecular Engineering
- DNA sequencing tools to analyze B cells on a population and single cell level
Z
-
- Adjunct Professor, Biomolecular Engineering
- Cancer genomics, bioinformatics, anti-cancer target and biomarker discovery, tumor immunology, drug-genome interaction