# converted from rr file by 'rr2constraints.py'
# Wed Jan 16 00:13:16 2008
# parameters:
#    nonbonus: 0.010000*sequencelen
# topfraction: 0.750000*sequencelen
# topdistance: 14.0
# lowdistance: 7.0
#
Constraint T38.CB S90.CB -999 7.0 14.0 0.246750 
Constraint Y94.CB A103.CB -999 7.0 14.0 0.235126 bonus
Constraint C40.CB L92.CB -999 7.0 14.0 0.232176 bonus
Constraint V41.CB L92.CB -999 7.0 14.0 0.230970 bonus
Constraint L39.CB S90.CB -999 7.0 14.0 0.229393 bonus
Constraint L39.CB C91.CB -999 7.0 14.0 0.221307 bonus
Constraint A108.CB A121.CB -999 7.0 14.0 0.220881 bonus
Constraint A108.CB Y145.CB -999 7.0 14.0 0.217305 bonus
Constraint C95.CB A104.CB -999 7.0 14.0 0.213046 bonus
Constraint V60.CB T77.CB -999 7.0 14.0 0.211996 bonus
Constraint C40.CB C91.CB -999 7.0 14.0 0.208585 bonus
Constraint V93.CB A103.CB -999 7.0 14.0 0.207025 bonus
Constraint Y94.CB A104.CB -999 7.0 14.0 0.207234 bonus
Constraint V93.CB C106.CB -999 7.0 14.0 0.204061 bonus
Constraint T107.CB V125.CB -999 7.0 14.0 0.203769 bonus
Constraint A108.CB V125.CB -999 7.0 14.0 0.204637 bonus
Constraint A108.CB L142.CB -999 7.0 14.0 0.198159 bonus
Constraint T38.CB G89.CA -999 7.0 14.0 0.194880 bonus
Constraint V93.CB S102.CB -999 7.0 14.0 0.195346 bonus
Constraint V93.CB V105.CB -999 7.0 14.0 0.195333 bonus
Constraint V41.CB V93.CB -999 7.0 14.0 0.193121 bonus
Constraint L39.CB G89.CA -999 7.0 14.0 0.190648 bonus
Constraint V41.CB V60.CB -999 7.0 14.0 0.188186 bonus
Constraint V93.CB A104.CB -999 7.0 14.0 0.187803 bonus
Constraint M81.CB L92.CB -999 7.0 14.0 0.179995 bonus
Constraint V41.CB L58.CB -999 7.0 14.0 0.178817 bonus
Constraint C40.CB V60.CB -999 7.0 14.0 0.176843 bonus
Constraint M111.CB A121.CB -999 7.0 14.0 0.176162 bonus
Constraint M81.CB C91.CB -999 7.0 14.0 0.172630 bonus
Constraint S100.CB F138.CB -999 7.0 14.0 0.172306 bonus
Constraint V41.CB C91.CB -999 7.0 14.0 0.167749 bonus
Constraint T107.CB L118.CB -999 7.0 14.0 0.168627 bonus
Constraint V93.CB L110.CB -999 7.0 14.0 0.166635 bonus
Constraint Y94.CB V105.CB -999 7.0 14.0 0.163171 bonus
Constraint C95.CB V105.CB -999 7.0 14.0 0.164168 bonus
Constraint L92.CB A108.CB -999 7.0 14.0 0.159233 bonus
Constraint A108.CB L118.CB -999 7.0 14.0 0.159880 bonus
Constraint V41.CB E57.CB -999 7.0 14.0 0.157471 bonus
Constraint D64.CB R101.CB -999 7.0 14.0 0.155207 bonus
Constraint T107.CB L142.CB -999 7.0 14.0 0.154974 bonus
Constraint A104.CB F138.CB -999 7.0 14.0 0.153499 bonus
Constraint L92.CB L110.CB -999 7.0 14.0 0.152291 bonus
Constraint L39.CB L92.CB -999 7.0 14.0 0.150488 bonus
Constraint Y94.CB A108.CB -999 7.0 14.0 0.150495 bonus
Constraint T107.CB A121.CB -999 7.0 14.0 0.150594 bonus
Constraint C91.CB L110.CB -999 7.0 14.0 0.149351 bonus
Constraint A108.CB Q141.CB -999 7.0 14.0 0.149116 bonus
Constraint N42.CB V60.CB -999 7.0 14.0 0.146861 bonus
Constraint K96.CB N135.CB -999 7.0 14.0 0.147221 bonus
Constraint V41.CB V55.CB -999 7.0 14.0 0.145479 bonus
Constraint Y94.CB C106.CB -999 7.0 14.0 0.145873 bonus
Constraint V60.CB A108.CB -999 7.0 14.0 0.144781 bonus
Constraint C95.CB C106.CB -999 7.0 14.0 0.145704 bonus
Constraint L92.CB Y109.CB -999 7.0 14.0 0.144071 bonus
Constraint V93.CB A121.CB -999 7.0 14.0 0.143203 bonus
Constraint V60.CB L92.CB -999 7.0 14.0 0.142141 bonus
Constraint V93.CB A108.CB -999 7.0 14.0 0.139810 bonus
Constraint C40.CB L58.CB -999 7.0 14.0 0.136007 bonus
Constraint N42.CB R59.CB -999 7.0 14.0 0.135928 bonus
Constraint N42.CB V62.CB -999 7.0 14.0 0.136322 bonus
Constraint V93.CB T107.CB -999 7.0 14.0 0.135199 bonus
Constraint L92.CB T107.CB -999 7.0 14.0 0.133422 bonus
Constraint C106.CB A121.CB -999 7.0 14.0 0.131794 bonus
Constraint T107.CB F122.CB -999 7.0 14.0 0.132710 bonus
Constraint C40.CB E57.CB -999 7.0 14.0 0.131314 bonus
Constraint L39.CB V60.CB -999 7.0 14.0 0.129864 bonus
Constraint K96.CB F138.CB -999 7.0 14.0 0.130386 bonus
Constraint V105.CB A121.CB -999 7.0 14.0 0.130601 bonus
Constraint L92.CB V125.CB -999 7.0 14.0 0.128725 bonus
Constraint V60.CB V105.CB -999 7.0 14.0 0.126962 bonus
Constraint L92.CB V105.CB -999 7.0 14.0 0.126608 bonus
Constraint S100.CB N135.CB -999 7.0 14.0 0.125862 bonus
Constraint A108.CB F138.CB -999 7.0 14.0 0.126643 bonus
Constraint L39.CB L58.CB -999 7.0 14.0 0.124786 bonus
Constraint M81.CB L110.CB -999 7.0 14.0 0.124605 bonus
Constraint C40.CB V55.CB -999 7.0 14.0 0.121531 bonus
Constraint C40.CB A56.CB -999 7.0 14.0 0.120869 bonus
Constraint V41.CB M81.CB -999 7.0 14.0 0.119800 bonus
Constraint N42.CB E57.CB -999 7.0 14.0 0.120605 bonus
Constraint V60.CB Y109.CB -999 7.0 14.0 0.120870 bonus
Constraint N97.CB N135.CB -999 7.0 14.0 0.121418 bonus
Constraint N97.CB F138.CB -999 7.0 14.0 0.120631 bonus
Constraint Y109.CB A121.CB -999 7.0 14.0 0.121039 bonus
Constraint V43.CB V60.CB -999 7.0 14.0 0.118049 bonus
Constraint V60.CB A80.CB -999 7.0 14.0 0.118150 bonus
Constraint A121.CB L142.CB -999 7.0 14.0 0.118086 bonus
Constraint F122.CB W139.CB -999 7.0 14.0 0.118980 bonus
Constraint V41.CB V62.CB -999 7.0 14.0 0.116589 bonus
Constraint F122.CB F138.CB -999 7.0 14.0 0.116535 bonus
Constraint C40.CB V93.CB -999 7.0 14.0 0.115220 bonus
Constraint L92.CB A103.CB -999 7.0 14.0 0.114349 bonus
Constraint A104.CB V125.CB -999 7.0 14.0 0.114646 bonus
Constraint L110.CB A121.CB -999 7.0 14.0 0.115255 bonus
Constraint V60.CB M81.CB -999 7.0 14.0 0.113716 bonus
Constraint L92.CB A104.CB -999 7.0 14.0 0.113793 bonus
Constraint L92.CB L142.CB -999 7.0 14.0 0.113296 bonus
Constraint V93.CB V125.CB -999 7.0 14.0 0.114172 bonus
Constraint M111.CB V125.CB -999 7.0 14.0 0.113391 bonus
Constraint T38.CB V60.CB -999 7.0 14.0 0.111954 bonus
Constraint F122.CB Y145.CB -999 7.0 14.0 0.112538 bonus
Constraint L92.CB C106.CB -999 7.0 14.0 0.109753 bonus
Constraint V41.CB T77.CB -999 7.0 14.0 0.107211 bonus
Constraint V125.CB L142.CB -999 7.0 14.0 0.107844 bonus
Constraint L74.CB Y109.CB -999 7.0 14.0 0.106520 bonus
Constraint L92.CB M111.CB -999 7.0 14.0 0.106221 bonus
Constraint L39.CB A56.CB -999 7.0 14.0 0.104378 bonus
Constraint L39.CB E57.CB -999 7.0 14.0 0.104844 bonus
Constraint T77.CB T107.CB -999 7.0 14.0 0.104473 bonus
Constraint V93.CB L142.CB -999 7.0 14.0 0.105205 bonus
Constraint A104.CB A121.CB -999 7.0 14.0 0.105801 bonus
Constraint F19.CB I37.CB -999 7.0 14.0 0.103535 bonus
Constraint Y94.CB L110.CB -999 7.0 14.0 0.103284 bonus
Constraint M111.CB L142.CB -999 7.0 14.0 0.104177 bonus
Constraint V60.CB Y145.CB -999 7.0 14.0 0.102438 bonus
Constraint T77.CB Y109.CB -999 7.0 14.0 0.102100 bonus
Constraint C106.CB L142.CB -999 7.0 14.0 0.102523 bonus
Constraint Y94.CB T107.CB -999 7.0 14.0 0.101512 bonus
Constraint T107.CB F138.CB -999 7.0 14.0 0.101826 bonus
Constraint T77.CB A103.CB -999 7.0 14.0 0.099975 bonus
Constraint L118.CB W139.CB -999 7.0 14.0 0.100529 bonus
Constraint L18.CB I37.CB -999 7.0 14.0 0.098790 bonus
Constraint S100.CB P134.CB -999 7.0 14.0 0.099291 bonus