(c) 1992-2000 Regents of the University of California, Santa Cruz
Sequence Alignment and Modeling Software System
http://www.cse.ucsc.edu/research/compbio/sam.html

Citations (SAM, SAM-T99, HMMs)

Sequence numbers correspond to the following labels:

    • miniAGRP
    • gi|24159122|pdb|1MR0|A_1:34 Chain A, Solution Nmr Structure Of Agrp(87-120; C105a) [Taxonomy]
    • gi|13096183|pdb|1HYK|A_2:35 Chain A, Agouti-Related Protein (87-132) (Ac-Agrp(87-132)) [Taxonomy]
    • gi|57087209|ref|XP_536816.1|_87:120 PREDICTED: similar to ATPase, H+ transporting, lysosomal, V0 subunit D isoform 1 [Canis familiaris]
                 10        20        30       
                 |         |         |       
   1 ...CVRLHESCLGQQVPCCDPAATCYCRFFNAFCYCR...
   2 ...XVRLHESCLGQQVPCCDPAATCYCRFFNAFCYCR...
   3 x..CVRLHESCLGQQVPCCDPCATCYCRFFNAFCYCRklg
   4 prrCVRLHESCLGHQVPCCDPCATCYCRFFNAFCYCRklg
   5 prrCVRLHESCLGHQVPCCDPCATCYCRFFNAFCYCRklg
   6 prrCVRLHESCLGHQVPCCDPCATCYCRFFNAFCYCRklg
   7 prrCVRLHESCLGHQVPCCDPCATCYCRFFNAFCYCRklg
   8 prrCVRLHESCLGHQVPCCDPCATCYCRFFNAFCYCRklg
   9 prrCVRLHESCLGQQVPCCDPCATCYCRFFNAFCYCRklg
  10 srrCVRLHESCLGQQVPCCDPCATCYCRFFNAFCYCRklg
  11 srrCVRLHESCLGQQVPCCDPCATCYCRFFNAFCYCRklg
  12 srrCVRLHESCLGQQVPCCDPCATCYCRFFNAFCYCRklg
  13 prrCVRLLESCLGHQIPCCDPCATCYCRFFNAFCYCRkis
  14 prrCVRLLESCLGHQIPCCDPCATCYCRFFNAFCYCRkis
  15 prrCVRLLESCLGHQIPCCDPCATCYCRFFNAFCYCRkis
  16 prrCVRLLESCLGHQIPCCDPCATCYCRFFNAFCYCRkis
  17 prrCVRLHESCLGQQVPCCDLCATCYCRFFNTFCYCRklg
  18 psrCIPHQQSCLGHHLPCCNPCDTCYCRFFKAFCYCRsmd
  19 psrCIPHQQSCLGHHLPCCNPCDTCYCRFFKAFCYCRsmd
  20 prrCVRLHESCLGQQVPCCDLCATCYCRFFKT-CYCR...
  21 lrrCIPHQQSCLGYPLPCCDPCDTCYCRFFNAICYCRrvg
  22 prrCVRLHESCLGHQVPCCDPCATCYCRFFNAFC---...
  23 prrCVRLHESCLGHQVPCCDPCATCYCRFFNA-----...