(c) 1992-2000 Regents of the University of California, Santa Cruz
Sequence Alignment and Modeling Software System
http://www.cse.ucsc.edu/research/compbio/sam.html
Citations (SAM, SAM-T99, HMMs)
- R. Hughey, A. Krogh, Hidden Markov models for sequence analysis: Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
- K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting remote protein homologies, Bioinformatics 14(10):846-856, 1998.
- A. Krogh et al., Hidden Markov models in computational biology: Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
Sequence numbers correspond to the following labels:
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- ACH7_SHORT (P36544) Neuronal acetylcholine receptor protein, alpha-7 chain precursor
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- gi|55962651|emb|CAI11602.1|_10:215 novel cholinergic receptor, nicotinic, alpha polypeptide protein [Danio rerio]
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- gi|57105254|ref|XP_543227.1|_90:294 PREDICTED: similar to Neuronal acetylcholine receptor protein, alpha-2 chain precursor [Canis familiaris]
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- gi|34986|emb|CAA37625.1|_2:208 neuronal nicotinic acetylcholine receptor alpha-3 subunit [Homo sapiens]
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- gi|30582633|gb|AAP35543.1|_33:239 cholinergic receptor, nicotinic, alpha polypeptide 3 [Homo sapiens]
- gi|19923122|ref|NP_000734.2| cholinergic receptor, nicotinic, alpha polypeptide 3 [Homo sapiens]
- gi|12653483|gb|AAH00513.1| Cholinergic receptor, nicotinic, alpha polypeptide 3 [Homo sapiens]
- gi|12804469|gb|AAH01642.1| Cholinergic receptor, nicotinic, alpha polypeptide 3 [Homo sapiens]
- gi|12804275|gb|AAH02996.1| Cholinergic receptor, nicotinic, alpha polypeptide 3 [Homo sapiens]
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- gi|4261947|gb|AAD14247.1|_22:229 nicotinic acetylcholine receptor alpha subunit|AChR alpha subunit [Homo sapiens]
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- gi|57048694|ref|XP_545950.1|_31:236 PREDICTED: similar to Neuronal acetylcholine receptor protein, alpha-9 chain precursor [Canis familiaris]
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