Best Alignments for YGR230W

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1ihuA/YGR230W-1ihuA-local-str-0.3-adpstyle5.a2m 1ihuA/YGR230W-1ihuA-local-str-0.3-adpstyle5.al 4.4213e+004.8165e+00 c.37.1.10
1dszA/YGR230W-1dszA-local-str-0.3-adpstyle5.a2m 1dszA/YGR230W-1dszA-local-str-0.3-adpstyle5.al 5.8467e+003.1610e+00 2nllB g.39.1.2
1nzyA/YGR230W-1nzyA-local-str-0.3-adpstyle5.a2m 1nzyA/YGR230W-1nzyA-local-str-0.3-adpstyle5.al 7.6740e+005.2129e+00 1nzyA c.14.1.3
1jhwA/YGR230W-1jhwA-local-adpstyle1.a2m 1jhwA/YGR230W-1jhwA-local-adpstyle1.al 1.3781e+011.5416e+01
1krcC/1ubpC-YGR230W-fssp-global-adpstyle5.a2m 1krcC/1ubpC-YGR230W-fssp-global-adpstyle5.al 1.9069e+014.0263e+00 1ubpC c.1.9.2
b.92.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001