% SAM: /projects/compbio/bin/i686/hmmscore v3.4 (July 31, 2003) compiled 02/04/04_14:53:24 % (c) 1992-2001 Regents of the University of California, Santa Cruz % % Sequence Alignment and Modeling Software System % http://www.cse.ucsc.edu/research/compbio/sam.html % % ----------------- Citations (SAM, SAM-T2K, HMMs) -------------------- % R. Hughey, A. Krogh, Hidden Markov models for sequence analysis: % Extension and analysis of the basic method, CABIOS 12:95-107, 1996. % K. Karplus, et al., What is the value added by human intervention in protein % structure prediction, Proteins: Stucture, Function, Genetics 45(S5):86--91, 2001. % A. Krogh et al., Hidden Markov models in computational biology: % Applications to protein modeling, JMB 235:1501-1531, Feb 1994. % --------------------------------------------------------------------- % w0.5foo.1.YGR217W.t2k-w0.5.mod Host: cc85 Thu Feb 26 17:17:41 2004 % karplus Dir: /projects/compbio/experiments/protein-predict/yeast/YGR2/YGR217W % --------------------------------------------------------------------- % Inserted Files: YGR217W.t2k-w0.5.mod % Database Files: /projects/compbio/data/pdb/dunbrack-pdbaa % % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by +1.5*ln(seq len) (adjust_score = 2) % Track 0 FIMs added (geometric mean of match probabilities (6)) % Single Track Model: YGR217W.t2k-w0.5.mod % Score DP Method: forward all-paths (dpstyle = 0) % Align DP Method: viterbi (adpstyle = 1) % 15525 sequences, 3569041 residues, 2040 nodes, 3418.78 seconds % % Sequence scores selected if better than: % E-value (Emax 4.0e+01) (select_score=4) % % Simple: NLL-NULL using FIM probabilities % Reverse: NLL-NULL for the reverse sequence NULL model % Calculated when Simple < simple_threshold (0.00) % E-value on N (=8162) sequences: % N / (1 + exp(-(lambda(=2.3525) * Reverse)^tau(=0.8341))) % Calculated when Simple < simple_threshold (0.00) % Rescale E-values or use -dbsize for multiple scoring runs. % Scores sorted by E-value, best first % % Sequence ID Length Simple Reverse E-value X count 1byyA 53 -52.86 -40.28 3.67e-16 :53 NMR NA NA NA PROTEIN (SODIUM CHANNEL ALPHA-SUBUNIT) 1orqC 223 -55.63 -35.79 2.41e-14 :223 XRAY 3.20 0.253 0.298 potassium channel 1qdvA 99 -38.09 -24.90 9.15e-10 :99 XRAY 1.60 0.238 0.278 KV1.2 VOLTAGE-GATED POTASSIUM CHANNEL || 1QDVB 1QDVC 1QDVD 1t1dA 100 -35.52 -22.27 1.29e-08 :100 XRAY 1.51 0.229 0.249 PROTEIN (POTASSIUM CHANNEL KV1.1) 1eodA 100 -35.06 -21.66 2.40e-08 :100 XRAY 2.45 0.218 0.234 POTASSIUM CHANNEL KV1.1 1eoeA 100 -35.30 -21.66 2.41e-08 :100 XRAY 1.70 0.219 0.249 POTASSIUM CHANNEL KV1.1 1eofA 100 -34.13 -21.05 4.52e-08 :100 XRAY 2.38 0.232 0.264 POTASSIUM CHANNEL KV1.1 1bl8A 97 -32.48 -20.94 5.05e-08 :97 XRAY 3.20 0.280 0.290 PROTEIN (POTASSIUM CHANNEL PROTEIN) || 1BL8B 1BL8C 1BL8D 1a68 95 -33.85 -20.90 5.25e-08 :95 XRAY 1.80 0.200 0.241 POTASSIUM CHANNEL KV1.1 1exbE 103 -33.81 -20.63 6.92e-08 :103 XRAY 2.10 0.216 0.227 POTASSIUM CHANNEL KV1.1 1j95A 125 -32.33 -20.59 7.25e-08 :125 XRAY 2.80 0.320 0.322 VOLTAGE-GATED POTASSIUM CHANNEL || 1J95B 1J95C 1J95D 1r3jC 124 -32.33 -20.58 7.28e-08 :124 XRAY 1.90 0.210 0.228 Voltage-gated potassium channel || 1K4CC 1K4DC 1R3IC 1R3KC 1R3LC 1jvmA 125 -32.33 -20.57 7.34e-08 :125 XRAY 2.80 0.290 0.302 Voltage-gated potassium channel || 1JVMB 1JVMC 1JVMD 1f6gA 160 -32.62 -20.52 7.74e-08 :160 NMR NA NA NA VOLTAGE-GATED POTASSIUM CHANNEL || 1F6GB 1F6GC 1F6GD 1dsxA 87 -31.73 -19.05 3.57e-07 :87 XRAY 1.60 0.237 0.279 PROTEIN (KV1.2 VOLTAGE-GATED POTASSIUM CHANNEL) || 1DSXB 1DSXC 1DSXD 1DSXE 1DSXF 1DSXG 1DSXH 1qdwA 87 -31.70 -19.04 3.61e-07 :87 XRAY 2.10 0.223 0.266 KV1.2 VOLTAGE-GATED POTASSIUM CHANNEL || 1QDWB 1QDWC 1QDWD 1QDWE 1QDWF 1QDWG 1QDWH 1nn7A 105 -29.59 -15.29 1.96e-05 :105 XRAY 2.10 0.230 0.277 potassium channel Kv4.2 1qg9A 21 -23.42 -12.78 3.07e-04 :21 NMR NA NA NA PROTEIN (SODIUM CHANNEL PROTEIN, BRAIN II ALPHA SUBUNIT) 1ho2A 20 -22.54 -12.68 3.42e-04 :20 NMR NA NA NA VOLTAGE-GATED POTASSIUM CHANNEL PROTEIN || 1HO7A 1oojA 149 -28.77 -11.77 9.56e-04 :149 XRAY 2.11 0.223 0.271 Calmodulin CMD-1 1mxeA 148 -28.70 -11.71 1.02e-03 :148 XRAY 1.70 0.190 0.229 Calmodulin || 1MXEB 2BBMA 2BBNA 4CLN0 1deg 142 -27.79 -11.70 1.03e-03 :142 XRAY 2.90 0.230 NA CALMODULIN 3cln 148 -28.10 -11.27 1.68e-03 :148 XRAY 2.20 0.175 NA CALMODULIN || 1DMO0 1prwA 149 -28.45 -11.13 1.98e-03 :149 XRAY 1.70 0.186 0.230 Calmodulin 1iq5A 149 -28.41 -11.10 2.05e-03 :149 XRAY 1.80 0.217 0.248 CALMODULIN || 1LVCD 1LVCE 1LVCF 1g4yR 148 -28.34 -11.04 2.18e-03 :148 XRAY 1.60 0.212 0.251 CALMODULIN || 1A290 1CFC0 1CFD0 1CFFA 1CKKA 1CLL0 1CM1A 1CM4A 1CM4C 1CM4E 1CM4G 1CTR0 1IWQA 1K90D 1K90E 1K90F 1L7ZA 1LIN0 1MUX0 1NIWA 1NIWC 1NIWE 1NIWG 1NWDA 1QIVA 1QIWA 1QIWB 1cdlA 147 -28.30 -11.01 2.26e-03 :147 XRAY 2.00 0.208 NA CALMODULIN || 1CDLB 1CDLC 1CDLD 1PK0D 1PK0E 1PK0F 5tnc 162 -29.97 -10.98 2.36e-03 :162 XRAY 2.00 0.155 NA TROPONIN-C 3kvt 115 -23.50 -10.92 2.51e-03 :115 XRAY 2.00 0.225 0.238 POTASSIUM CHANNEL PROTEIN SHAW 1tcf 159 -29.17 -10.88 2.64e-03 :159 XRAY 1.90 0.278 0.358 TROPONIN C || 1TN40 2TN40 1ahr 146 -28.03 -10.81 2.84e-03 :146 XRAY 1.80 0.211 NA CALMODULIN 1a2xA 159 -29.12 -10.76 3.02e-03 :159 XRAY 2.30 0.222 0.325 TROPONIN C 1ggzA 148 -27.96 -10.76 3.03e-03 :148 XRAY 1.50 0.183 0.221 CALMODULIN-RELATED PROTEIN NB-1 1qtxA 148 -27.58 -10.54 3.88e-03 :148 XRAY 1.65 0.185 0.214 PROTEIN (CALMODULIN) 1top 162 -28.91 -10.49 4.12e-03 :162 XRAY 1.78 0.168 NA TROPONIN C || 1NCX0 1NCY0 1NCZ0 1vrkA 148 -27.37 -10.43 4.40e-03 :148 XRAY 1.90 0.171 0.242 CALMODULIN 1tnw 162 -28.89 -10.40 4.57e-03 :162 NMR NA NA NA TROPONIN C || 1TNX0 4tnc 162 -28.98 -10.32 5.01e-03 :162 XRAY 2.00 0.172 NA TROPONIN C 1cdmA 144 -27.47 -10.28 5.21e-03 :144 XRAY 2.00 0.208 NA ? 1npqA 90 -22.98 -10.03 6.98e-03 :90 NMR NA NA NA Troponin C 1qs7A 145 -26.82 -9.87 8.45e-03 :145 XRAY 1.80 0.228 0.259 CALMODULIN || 1QS7C 1lkjA 146 -24.30 -9.68 1.05e-02 :146 NMR NA NA NA Calmodulin 1exrA 148 -27.95 -9.68 1.05e-02 :148 XRAY 1.00 0.136 0.163 CALMODULIN || 1N0YA 1N0YB 1OSA0 1clm 148 -27.92 -9.64 1.11e-02 :148 XRAY 1.80 0.210 NA CALMODULIN 1k93D 144 -26.51 -9.34 1.57e-02 :144 XRAY 2.95 0.278 0.315 CALMODULIN || 1K93E 1K93F 1avsA 90 -23.01 -9.18 1.89e-02 :90 XRAY 1.75 0.220 0.250 TROPONIN C || 1AVSB 1BLQ0 1SKT0 1TNP0 1TNQ0 1ZAC0 1f70A 76 -21.83 -9.04 2.22e-02 :76 NMR NA NA NA CALMODULIN || 1J7OA 1ak8 76 -21.78 -8.98 2.39e-02 :76 NMR NA NA NA CALMODULIN 1smg 90 -22.40 -8.83 2.87e-02 :90 NMR NA NA NA TROPONIN C 1f54A 77 -20.83 -8.68 3.43e-02 :77 NMR NA NA NA CALMODULIN || 1F55A 1oe9B 151 -24.33 -7.82 9.60e-02 :151 XRAY 2.05 0.222 0.264 MYOSIN LIGHT CHAIN 1, SLOW-TWITCH MUSCLE A ISOFORM 9wgaA 171 -28.18 -7.51 1.39e-01 :171 XRAY 1.80 0.175 NA WHEAT GERM LECTIN || 2WGCA 2WGCB 9WGAB 1j7qA 86 -20.98 -7.51 1.40e-01 :86 NMR NA NA NA Calcium Vector Protein || 1J7RA 1um3B 160 -19.50 -7.42 1.57e-01 :160 XRAY 3.00 0.258 0.346 subunit IV || 1UM3O 1wgtA 186 -29.16 -7.36 1.67e-01 :186 XRAY 1.90 0.191 NA WHEAT GERM LECTIN || 1K7TA 1K7TB 1K7UA 1K7UB 1K7VA 1K7VB 1WGTB 2cwgA 171 -27.82 -7.18 2.11e-01 :171 XRAY 2.00 0.171 NA AGGLUTININ ISOLECTIN 1 (WGA1) || 1WGCA 1WGCB 2CWGB 7WGAA 7WGAB 1trf 76 -20.35 -6.76 3.51e-01 :76 NMR NA NA NA TROPONIN C 1q9bA 43 -18.85 -6.71 3.75e-01 :43 XRAY 1.50 0.128 0.145 Hevein || 1HEV0 1ulkA 126 -26.49 -6.63 4.11e-01 :126 XRAY 1.80 0.179 0.203 lectin-C || 1ULKB 1prxA 224 -19.92 -6.30 6.23e-01 :224 XRAY 2.00 0.191 0.259 HORF6 || 1PRXB 1ggwA 140 -20.70 -6.14 7.62e-01 :140 NMR NA NA NA PROTEIN (CDC4P) 1lnqA 336 -25.48 -6.13 7.69e-01 :336 XRAY 3.30 0.301 0.318 POTASSIUM CHANNEL RELATED PROTEIN || 1LNQB 1LNQC 1LNQD 1LNQE 1LNQF 1LNQG 1LNQH 1p0hA 318 -21.27 -6.11 7.91e-01 :318 XRAY 1.60 0.197 0.237 hypothetical protein Rv0819 || 1OZPA 1cojA 212 -21.20 -5.85 1.10e+00 :212 XRAY 1.90 0.170 0.200 PROTEIN (SUPEROXIDE DISMUTASE) 1scmC 149 -21.80 -5.84 1.12e+00 :149 XRAY 2.80 0.201 NA MYOSIN ESSENTIAL LIGHT CHAIN 1dflX 152 -21.90 -5.83 1.13e+00 :152 XRAY 4.20 0.394 0.400 MYOSIN HEAD || 1DFKZ 1DFLZ 1ulmA 82 -22.30 -5.83 1.13e+00 :82 XRAY 1.80 0.198 0.234 lectin-D2 || 1ULMB 1wdcC 156 -21.99 -5.78 1.20e+00 :156 XRAY 2.00 0.194 0.281 SCALLOP MYOSIN || 1B7TZ 1KK7Z 1KQMC 1KWOC 1L2OC 1QVIZ 1kk8C 154 -21.89 -5.76 1.24e+00 :154 XRAY 2.30 0.234 0.269 Myosin Essential Light Chain,Striated adductor muscle 1oyeA 1049 -33.02 -5.71 1.33e+00 :1049 XRAY 3.48 0.260 0.323 Acriflavine resistance protein B || 1OY6A 1OY8A 1OY9A 1OYDA 1iwgA 1053 -33.03 -5.70 1.33e+00 :1053 XRAY 3.50 0.290 0.355 AcrB 1jb0B 740 -19.52 -5.59 1.53e+00 :740 XRAY 2.50 0.199 0.217 PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A2 1q90D 159 -17.47 -5.47 1.78e+00 :159 XRAY 3.10 0.222 0.261 Cytochrome b6-f complex subunit 4 1orsC 132 -24.75 -5.41 1.93e+00 :132 XRAY 1.90 0.231 0.251 potassium channel 1cjtC 402 -27.49 -5.37 2.04e+00 :402 XRAY 2.80 0.206 0.252 GUANINE NUCLEOTIDE-BINDING PROTEIN G(S) || 1CJKC 1CJUC 1CJVC 1azsC 402 -26.80 -5.22 2.48e+00 :402 XRAY 2.30 0.219 0.282 GS-ALPHA || 1AZTA 1AZTB 1pduA 244 -18.38 -5.20 2.53e+00 :244 XRAY 2.30 0.210 0.270 nuclear hormone receptor HR38 || 1PDUB 1jpaA 312 -20.70 -5.18 2.61e+00 :312 XRAY 1.91 0.231 0.270 neural kinase, Nuk=Eph/Elk/Eck family receptor-like tyrosine kinase || 1JPAB 1mvwB 145 -18.43 -5.14 2.73e+00 :145 NA 70.00 NA NA SKELETAL MUSCLE MYOSIN II REGULATORY; LIGHT CHAIN || 1M8QB 1M8QE 1M8QH 1M8QQ 1MVWE 1MVWH 1MVWK 1MVWN 1MVWQ 1O18E 1O18H 1O18K 1O18N 1O18Q 1O19B 1O19E 1O19H 1O19K 1O19N 1O19T 1O1AB 1O1AE 1O1AH 1O1AK 1O1AN 1O1AQ 1O1BB 1O1BE 1O1BH 1O1BK 1O1CB 1O1CE 1O1CH 1O1CK 1O1CQ 1O1DB 1O1DE 1O1DH 1O1DK 1O1DN 1O1DQ 1O1EB 1O1EE 1O1EH 1O1EK 1O1EN 1O1EQ 1O1FB 1O1FE 1O1FH 1O1FK 1O1GB 1O1GE 1O1GH 1O1GK 1O1GN 1O1GQ 1cs4C 394 -26.56 -5.07 3.00e+00 :394 XRAY 2.50 0.221 0.264 GUANINE NUCLEOTIDE-BINDING PROTEIN G(S) 2mysB 166 -19.30 -5.03 3.18e+00 :166 XRAY 2.80 0.223 NA MYOSIN || 1I84U 1I84Z 1culC 380 -25.09 -5.01 3.23e+00 :380 XRAY 2.40 0.221 0.263 GUANINE NUCLEOTIDE-BINDING PROTEIN G(S) 1k26A 156 -18.22 -4.99 3.34e+00 :156 XRAY 1.85 0.183 0.219 NUDIX HOMOLOG || 1JRKA 1JRKB 1JRKC 1JRKD 1K26B 1i7pA 274 -22.14 -4.98 3.36e+00 :274 XRAY 2.00 0.215 0.244 NADH-CYTOCHROME B5 REDUCTASE || 1IB0A 1mmc 30 -16.13 -4.92 3.67e+00 :30 NMR NA NA NA ANTIMICROBIAL PEPTIDE 2 1jbaA 204 -19.90 -4.88 3.85e+00 :204 NMR NA NA NA PROTEIN (GUANYLATE CYCLASE ACTIVATING PROTEIN 2) 1rtu 113 -19.60 -4.76 4.48e+00 :113 XRAY 1.80 0.143 0.178 RIBONUCLEASE U2 1ekeA 230 -23.03 -4.64 5.29e+00 :230 XRAY 2.00 0.213 0.262 RIBONUCLEASE HII || 1EKEB 1ctaA 35 -15.71 -4.61 5.52e+00 :35 NMR NA NA NA TROPONIN C SITE III - SITE III HOMODIMER || 1CTAB 1CTDA 1CTDB 1PONA 1n3bA 216 -17.15 -4.57 5.78e+00 :216 XRAY 1.80 0.217 0.246 Dephospho-CoA kinase || 1N3BB 1N3BC 1ge9A 184 -20.76 -4.55 5.94e+00 :184 NMR NA NA NA RIBOSOME RECYCLING FACTOR 1vhtA 218 -17.15 -4.55 5.95e+00 :218 XRAY 1.59 0.210 0.247 Dephospho-CoA kinase || 1VHLA 1VHLB 1VHLC 1VHTB 1VHTC 1VIYA 1VIYB 1VIYC 1fqjA 325 -21.50 -4.54 6.02e+00 :325 XRAY 2.02 0.233 0.265 CHIMERA OF GUANINE NUCLEOTIDE-BINDING PROTEIN G(T), ALPHA-1 SUBUNIT AND GUANINE NUCLEOTIDE-BINDING PROTEIN G(I), ALPHA-1 SUBUNIT || 1FQJD 1FQKA 1FQKC 1j7nA 776 -45.46 -4.54 6.03e+00 :776 XRAY 2.30 0.229 0.261 Lethal Factor precursor || 1J7NB 1JKYA 1PWPA 1PWPB 1PWQA 1PWQB 1PWVA 1PWVB 1n4qB 377 -22.91 -4.54 6.04e+00 :377 XRAY 2.40 0.214 0.234 geranyltransferase type-I beta subunit || 1N4PB 1N4PD 1N4PF 1N4PH 1N4PJ 1N4PL 1N4QD 1N4QF 1N4QH 1N4QJ 1N4QL 1N4RB 1N4RD 1N4RF 1N4RH 1N4RJ 1N4RL 1N4SB 1N4SD 1N4SF 1N4SH 1N4SJ 1N4SL 1nm1A 375 -19.87 -4.52 6.18e+00 :375 XRAY 1.80 0.197 0.232 Actin || 1NLVA 1NMDA 1l7pA 211 -21.88 -4.50 6.34e+00 :211 XRAY 1.90 0.229 0.266 PHOSPHOSERINE PHOSPHATASE || 1L7OA 1L7OB 1L7PB 1hyp 80 -15.98 -4.48 6.56e+00 :80 XRAY 1.80 0.187 NA HYDROPHOBIC PROTEIN FROM SOYBEAN 1pwuA 776 -45.32 -4.45 6.80e+00 :776 XRAY 2.70 0.235 0.270 Lethal factor || 1PWUB 1PWWA 1PWWB 1cp9A 205 -20.11 -4.43 6.94e+00 :205 XRAY 2.50 0.154 0.165 PENICILLIN AMIDOHYDROLASE 1gotA 350 -21.92 -4.41 7.13e+00 :350 XRAY 2.00 0.207 0.295 GT-ALPHA/GI-ALPHA CHIMERA 1ndh 272 -21.99 -4.41 7.20e+00 :272 XRAY 2.10 0.223 NA CYTOCHROME B5 REDUCTASE 2nlrA 234 -18.39 -4.39 7.39e+00 :234 XRAY 1.20 0.112 0.142 PROTEIN (ENDOGLUCANASE) || 1NLR0 2znc 258 -20.10 -4.34 7.83e+00 :258 XRAY 2.80 0.182 0.267 CARBONIC ANHYDRASE IV || 3ZNC0 1lufA 343 -17.98 -4.32 8.10e+00 :343 XRAY 2.05 0.231 0.246 muscle-specific tyrosine kinase receptor musk 1r42A 615 -24.49 -4.31 8.16e+00 :615 XRAY 2.20 0.235 0.287 angiotensin I converting enzyme 2 || 1R4LA 1fxwF 229 -20.55 -4.30 8.29e+00 :229 XRAY 2.10 0.210 0.275 PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB BETA SUBUNIT 1q0sA 259 -21.65 -4.27 8.58e+00 :259 XRAY 2.30 0.222 0.266 DNA adenine methylase || 1Q0TA 1Q0TB 1b55A 169 -19.76 -4.24 8.96e+00 :169 XRAY 2.40 0.234 0.350 TYROSINE-PROTEIN KINASE BTK || 1B55B 1bwnA 169 -19.69 -4.22 9.20e+00 :169 XRAY 2.10 0.214 0.290 BRUTONS TYROSINE KINASE || 1BWNB 1mjoA 104 -17.42 -4.22 9.24e+00 :104 XRAY 2.10 0.189 0.241 METHIONINE REPRESSOR || 1MJ2A 1MJ2B 1MJ2C 1MJ2D 1MJKA 1MJKB 1MJLA 1MJLB 1MJMA 1MJMB 1MJOB 1MJOC 1MJOD 1MJPA 1MJPB 1MJQA 1MJQB 1MJQC 1MJQD 1MJQG 1MJQH 1MJQI 1MJQJ 1g0xA 197 -21.07 -4.18 9.67e+00 :197 XRAY 2.10 0.214 0.244 LEUCOCYTE IMMUNOGLOBULIN-LIKE RECEPTOR-1 || 1P7QD 1k9uA 78 -17.27 -4.17 9.93e+00 :78 XRAY 1.75 0.192 0.223 Polcalcin Phl p 7 || 1K9UB 2mgj 154 -17.61 -4.13 1.04e+01 :154 XRAY 2.00 0.156 NA MYOGLOBIN 1eq1A 166 -20.88 -4.11 1.07e+01 :166 NMR NA NA NA APOLIPOPHORIN-III 1mnjA 153 -18.68 -4.10 1.08e+01 :153 XRAY 2.20 0.162 NA MYOGLOBIN || 1MNJB 1dejA 374 -20.20 -4.09 1.10e+01 :374 XRAY 2.40 0.171 0.214 CHIMERIC ACTIN 1cmcA 104 -17.25 -4.06 1.15e+01 :104 XRAY 1.80 0.183 NA MET REPRESSOR || 1CMAA 1CMAB 1CMBA 1CMBB 1CMCB 1bowA 159 -16.42 -4.04 1.17e+01 :159 XRAY 2.70 0.202 0.270 MULTIDRUG-EFFLUX TRANSPORTER 1 REGULATOR BMRR || 2BOWA 1nyhA 166 -19.42 -4.03 1.19e+01 :166 XRAY 3.10 0.273 0.288 Regulatory protein SIR4 2mge 154 -17.60 -4.03 1.20e+01 :154 XRAY 1.70 0.161 NA MYOGLOBIN || 2MGC0 2MGD0 1btkA 169 -19.63 -4.00 1.23e+01 :169 XRAY 1.60 0.231 0.282 BRUTONS TYROSINE KINASE || 1BTKB 1duxC 94 -16.39 -3.99 1.26e+01 :94 XRAY 2.10 0.202 0.236 ETS-DOMAIN PROTEIN ELK-1 || 1DUXF 1b6a 478 -38.19 -3.98 1.27e+01 :478 XRAY 1.60 0.187 0.216 METHIONINE AMINOPEPTIDASE 1qzyA 478 -38.24 -3.98 1.27e+01 :478 XRAY 1.60 0.204 0.211 Methionine aminopeptidase 2 || 1BN50 1BOA0 1KQ0A 1KQ9A 1e27A 276 -20.70 -3.96 1.31e+01 :276 XRAY 2.20 0.199 0.255 HLA CLASS I HISTOCOMPATIBILITY ANTIGEN HEAVY CHAIN 1fcs 154 -17.65 -3.95 1.33e+01 :154 XRAY 1.60 0.197 NA MYOGLOBIN 1qs2A 401 -30.26 -3.92 1.38e+01 :401 XRAY 2.70 0.207 0.266 ADP-RIBOSYLTRANSFERASE 1egjL 215 -20.47 -3.90 1.42e+01 :215 XRAY 2.80 0.220 0.288 ANTIBODY (LIGHT CHAIN) 1fx8A 281 -16.24 -3.89 1.44e+01 :281 XRAY 2.20 0.197 0.223 GLYCEROL UPTAKE FACILITATOR PROTEIN || 1LDAA 1LDIA 1mgn 154 -17.46 -3.88 1.45e+01 :154 XRAY 1.90 0.153 NA METMYOGLOBIN 1qnf 484 -19.76 -3.87 1.47e+01 :484 XRAY 1.80 0.197 0.239 PHOTOLYASE 1ih0A 71 -17.76 -3.87 1.48e+01 :71 NMR NA NA NA TROPONIN C, SLOW SKELETAL AND CARDIAC MUSCLES 1mg7A 417 -26.51 -3.87 1.48e+01 :417 XRAY 1.55 0.204 0.212 early switch protein xol-1 2.2k splice form || 1MG7B 1lgwA 164 -17.16 -3.86 1.49e+01 :164 XRAY 1.85 0.176 NA Lysozyme || 1LGUA 1LGXA 1LI2A 1LI3A 1LI6A 1nkwH 174 -17.14 -3.86 1.50e+01 :174 XRAY 3.10 0.240 0.274 50S ribosomal protein L13 || 1NWXH 1NWYH 102m 154 -17.55 -3.85 1.52e+01 :154 XRAY 1.84 0.159 0.203 MYOGLOBIN || 103M0 1je6A 275 -20.93 -3.85 1.52e+01 :275 XRAY 2.50 0.259 0.298 MHC class I chain-related protein 1cikA 154 -17.50 -3.85 1.52e+01 :154 XRAY 1.70 0.151 0.193 PROTEIN (MYOGLOBIN) 1fz1A 527 -24.24 -3.84 1.55e+01 :527 XRAY 1.96 0.200 0.234 METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN || 1FYZA 1FYZB 1FZ0A 1FZ0B 1FZ1B 1FZ2A 1FZ2B 1FZ3A 1FZ3B 1FZ4A 1FZ4B 1FZ5A 1FZ5B 1FZ6A 1FZ6B 1FZ7A 1FZ7B 1FZ8A 1FZ8B 1FZ9A 1FZ9B 1FZHA 1FZHB 1FZIA 1FZIB 1hu3A 260 -22.76 -3.84 1.55e+01 :260 XRAY 2.37 0.249 0.295 EIF4GII 1gv3A 248 -22.92 -3.83 1.56e+01 :248 XRAY 2.00 0.188 0.211 MANGANESE SUPEROXIDE DISMUTASE || 1GV3B 1ldfA 281 -16.10 -3.82 1.57e+01 :281 XRAY 2.10 0.230 0.243 Glycerol uptake facilitator protein 1c0gA 374 -19.52 -3.82 1.58e+01 :374 XRAY 2.00 0.182 0.223 PROTEIN (CHIMERIC ACTIN) 1i3kA 348 -20.88 -3.79 1.64e+01 :348 XRAY 1.50 0.175 0.198 UDP-GLUCOSE 4-EPIMERASE || 1I3KB 1I3LA 1I3LB 1I3MA 1I3MB 1I3NA 1I3NB 1jd0A 263 -19.36 -3.79 1.64e+01 :263 XRAY 1.50 0.190 0.207 CARBONIC ANHYDRASE XII || 1JCZA 1JCZB 1JD0B 1e28A 276 -20.89 -3.79 1.66e+01 :276 XRAY 3.00 0.194 0.253 HLA CLASS I HISTOCOMPATIBILITY ANTIGEN HEAVY CHAIN 1ozsA 73 -17.80 -3.77 1.70e+01 :73 NMR NA NA NA Troponin C, slow skeletal and cardiac muscles 1cp0A 154 -17.36 -3.75 1.73e+01 :154 XRAY 2.00 0.140 0.202 PROTEIN (MYOGLOBIN) 1mlo 154 -17.67 -3.75 1.74e+01 :154 XRAY 1.80 0.159 NA MYOGLOBIN || 1MLM0 1MLN0 1bn7A 294 -19.71 -3.75 1.75e+01 :294 XRAY 1.50 0.158 0.178 HALOALKANE DEHALOGENASE || 1BN6A 1l7mA 211 -21.26 -3.73 1.79e+01 :211 XRAY 1.48 0.202 0.232 Phosphoserine Phosphatase || 1F5SA 1F5SB 1L7MB 1L7NA 1L7NB 1h54A 754 -38.16 -3.72 1.81e+01 :754 XRAY 2.15 0.186 0.225 MALTOSE PHOSPHORYLASE || 1H54B 1q2kA 31 -14.29 -3.71 1.83e+01 :31 NMR NA NA NA Neurotoxin BmK37 1ceo 343 -22.84 -3.70 1.86e+01 :343 XRAY 1.90 0.194 0.222 CELLULASE CELC || 1CEN0 1f20A 435 -20.59 -3.69 1.90e+01 :435 XRAY 1.90 0.186 0.206 NITRIC-OXIDE SYNTHASE 1mod 154 -17.45 -3.68 1.92e+01 :154 XRAY 2.00 0.141 NA MYOGLOBIN || 1MOC0 2MGI0 1mtyD 512 -23.63 -3.67 1.94e+01 :512 XRAY 1.70 0.183 NA METHANE MONOOXYGENASE HYDROXYLASE || 1MMOD 1MMOE 1MTYE 1bif 469 -25.87 -3.67 1.94e+01 :469 XRAY 2.00 0.183 0.250 6-PHOSPHOFRUCTO-2-KINASE/ FRUCTOSE-2,6-BISPHOSPHATASE 2bifA 469 -25.94 -3.67 1.94e+01 :469 XRAY 2.40 0.200 0.244 PROTEIN (6-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE) || 2BIFB 1cec 343 -22.91 -3.66 1.97e+01 :343 XRAY 2.15 0.168 0.215 ENDOGLUCANASE CELC 3bifA 468 -25.86 -3.66 1.97e+01 :468 XRAY 2.30 0.197 0.243 PROTEIN (6-PHOSPHOFRUCTO-2-KINASE/ FRUCTOSE-2,6-BISPHOSPHATASE) 1cqwA 295 -19.64 -3.66 1.98e+01 :295 XRAY 1.50 0.176 0.188 HALOALKANE DEHALOGENASE; 1-CHLOROHEXANE HALIDOHYDROLASE 1a1oA 276 -20.40 -3.65 1.99e+01 :276 XRAY 2.30 0.168 NA HLA class I histocompatibility antigen, BW-53 B*5301 alpha chain 1ch7A 154 -17.12 -3.65 1.99e+01 :154 XRAY 1.90 0.155 0.205 PROTEIN (MYOGLOBIN) 1mti 154 -17.49 -3.64 2.02e+01 :154 XRAY 1.90 0.176 NA MYOGLOBIN 1p49A 561 -22.60 -3.64 2.03e+01 :561 XRAY 2.60 0.254 0.301 STERYL-SULFATASE 1kvp 497 -22.35 -3.63 2.05e+01 :497 EM 27.00 NA NA CAPSID PROTEIN CHIMERA 1a1mA 278 -20.43 -3.60 2.13e+01 :278 XRAY 2.30 0.205 NA B*5301 1i9sA 210 -20.68 -3.60 2.14e+01 :210 XRAY 1.65 0.196 0.225 MRNA CAPPING ENZYME || 1I9TA 1ml5c 228 -20.27 -3.59 2.17e+01 :228 EM NA NA NA 50S RIBOSOMAL PROTEIN L1 || 1GIYC 1co8A 154 -17.11 -3.59 2.18e+01 :154 XRAY 1.80 0.166 0.215 PROTEIN (MYOGLOBIN) 1ofk 154 -17.39 -3.58 2.19e+01 :154 XRAY 1.80 0.153 0.195 MYOGLOBIN 1mnh 153 -18.19 -3.57 2.24e+01 :153 XRAY 2.30 0.185 NA MYOGLOBIN 1eg0N 229 -20.29 -3.56 2.26e+01 :229 EM 11.50 NA NA PROTEIN (RIBOSOMAL PROTEIN L1) 1aec 218 -18.80 -3.53 2.35e+01 :218 XRAY 1.86 0.145 NA ACTINIDIN 1ch2A 154 -17.22 -3.52 2.38e+01 :154 XRAY 1.80 0.141 0.185 PROTEIN (MYOGLOBIN) 1cklA 126 -16.75 -3.50 2.46e+01 :126 XRAY 3.10 0.244 0.298 PROTEIN (CD46) || 1CKLB 1CKLC 1CKLD 1CKLE 1CKLF 1hzjA 348 -20.69 -3.49 2.49e+01 :348 XRAY 1.50 0.185 0.227 UDP-GALACTOSE 4-EPIMERASE || 1HZJB 1ek6A 348 -20.66 -3.48 2.50e+01 :348 XRAY 1.50 0.169 0.198 UDP-GALACTOSE 4-EPIMERASE || 1EK5A 1EK6B 1m05A 277 -23.03 -3.48 2.52e+01 :277 XRAY 1.90 0.242 0.283 HLA class I histocompatibility antigen, B-8 B*0801 alpha chain || 1M05C 1MI5A 1agdA 276 -23.02 -3.48 2.53e+01 :276 XRAY 2.05 0.181 NA B*0801 || 1AGBA 1AGCA 1AGEA 1AGFA 1eztA 166 -18.53 -3.47 2.54e+01 :166 NMR NA NA NA REGULATOR OF G-PROTEIN SIGNALING 4 || 1EZYA 1n7uA 554 -29.21 -3.47 2.55e+01 :554 XRAY 2.40 0.247 0.248 Adsorption protein P2 1bjfA 193 -18.47 -3.47 2.55e+01 :193 XRAY 2.40 0.218 0.308 NEUROCALCIN DELTA || 1BJFB 1n7vA 555 -29.25 -3.47 2.56e+01 :555 XRAY 2.20 0.243 0.262 Adsorption protein P2 1mym 154 -17.24 -3.47 2.56e+01 :154 XRAY 1.70 0.159 NA MYOGLOBIN || 101M0 1MTJ0 1MTK0 1ib2A 349 -18.35 -3.47 2.57e+01 :349 XRAY 1.90 0.198 0.242 PUMILIO 1 || 1M8WA 1M8WB 1M8XA 1M8XB 1M8YA 1M8YB 1M8ZA 1ai1L 215 -19.67 -3.46 2.58e+01 :215 XRAY 2.80 0.220 NA IGG1-KAPPA 59.1 FAB (LIGHT CHAIN) || 1ACYL 1gntA 553 -29.27 -3.46 2.60e+01 :553 XRAY 1.25 0.158 0.173 HYBRID CLUSTER PROTEIN || 1E2UA 1E9VA 1OA1A 1e1dA 553 -28.92 -3.46 2.60e+01 :553 XRAY 1.72 0.171 0.208 HYBRID CLUSTER PROTEIN 1l25 164 -16.29 -3.45 2.64e+01 :164 XRAY 1.80 0.180 NA T4 LYSOZYME 1ch3A 154 -17.29 -3.44 2.65e+01 :154 XRAY 2.00 0.149 0.202 PROTEIN (MYOGLOBIN) 1hmkA 124 -17.12 -3.44 2.68e+01 :124 XRAY 2.00 0.198 0.275 PROTEIN (ALPHA-LACTALBUMIN) 1jm6A 407 -18.13 -3.43 2.70e+01 :407 XRAY 2.50 0.191 0.262 Pyruvate dehydrogenase kinase, isozyme 2 || 1JM6B 1hfyA 123 -17.10 -3.43 2.71e+01 :123 XRAY 2.30 0.195 0.270 ALPHA-LACTALBUMIN || 1HFYB 1jw8A 154 -17.23 -3.43 2.72e+01 :154 XRAY 1.30 0.135 0.157 MYOGLOBIN || 109M0 110M0 111M0 112M0 1ABS0 1J52A 1TES0 2MBW0 2MGK0 2MGL0 2MGM0 1e3cP 489 -20.06 -3.42 2.73e+01 :489 XRAY 2.65 0.174 0.243 ARYLSULFATASE A 1ch5A 154 -17.20 -3.42 2.74e+01 :154 XRAY 2.10 0.156 0.217 PROTEIN (MYOGLOBIN) 1m45A 148 -17.68 -3.41 2.77e+01 :148 XRAY 1.65 0.193 0.228 Myosin light chain || 1M46A 1N2DA 1N2DB 1mls 154 -17.15 -3.41 2.80e+01 :154 XRAY 1.70 0.153 NA MYOGLOBIN || 1MLQ0 1MLR0 1e1zP 489 -19.86 -3.40 2.81e+01 :489 XRAY 2.40 0.196 0.243 ARYLSULFATASE A 1dceA 567 -19.90 -3.40 2.81e+01 :567 XRAY 2.00 0.215 0.263 PROTEIN (RAB GERANYLGERANYLTRANSFERASE ALPHA SUBUNIT) || 1DCEC 1LTXA 1co9A 154 -17.03 -3.39 2.84e+01 :154 XRAY 1.60 0.143 0.183 PROTEIN (MYOGLOBIN) 1i50I 122 -16.89 -3.39 2.85e+01 :122 XRAY 2.80 0.229 0.282 DNA-DIRECTED RNA POLYMERASE II 14.2KD POLYPEPTIDE || 1I3QI 1I6HI 1K83I 1NIKI 1NT9I 1PQVI 1R5UI 1R9RI 1jc2A 76 -17.94 -3.38 2.88e+01 :76 NMR NA NA NA TROPONIN C, SKELETAL MUSCLE 1gvnB 287 -18.93 -3.38 2.91e+01 :287 XRAY 1.95 0.200 0.237 ZETA || 1GVND 487dH 224 -19.82 -3.37 2.94e+01 :224 EM 7.50 NA NA PROTEIN (50S L1 RIBOSOMAL PROTEIN) 1fmd2 218 -17.08 -3.36 2.97e+01 :218 XRAY 3.50 0.204 NA FOOT-AND-MOUTH DISEASE VIRUS (SUBUNIT VP2) || 1QGC2 1nr3A 122 -15.90 -3.36 2.97e+01 :122 NMR NA NA NA DNA-binding protein tfx 2mgb 154 -17.38 -3.36 2.99e+01 :154 XRAY 2.00 0.155 NA MYOGLOBIN || 1MOB0 2MGA0 1jr3D 343 -15.36 -3.36 3.00e+01 :343 XRAY 2.70 0.268 0.304 DNA polymerase III, delta subunit || 1JQJC 1JQJD 1c0fA 367 -19.74 -3.35 3.01e+01 :367 XRAY 2.40 0.183 0.231 ACTIN 1mll 154 -17.13 -3.35 3.02e+01 :154 XRAY 1.70 0.157 NA MYOGLOBIN || 106M0 107M0 108M0 1MLJ0 1MLK0 1p85H 142 -15.99 -3.34 3.05e+01 :142 EM NA NA NA 50S ribosomal protein L13 || 1P86H 3ctn 76 -17.71 -3.34 3.05e+01 :76 NMR NA NA NA TROPONIN C 1kjyA 325 -19.58 -3.34 3.07e+01 :325 XRAY 2.70 0.238 0.299 GUANINE NUCLEOTIDE-BINDING PROTEIN G(I), ALPHA-1 SUBUNIT || 1KJYC 1j97A 210 -20.85 -3.33 3.12e+01 :210 XRAY 1.50 0.189 0.209 Phosphoserine Phosphatase || 1J97B 189l 164 -16.75 -3.32 3.13e+01 :164 XRAY 2.50 0.200 NA T4 LYSOZYME 1qqp2 218 -16.16 -3.32 3.13e+01 :218 XRAY 1.90 0.161 NA PROTEIN (GENOME POLYPROTEIN) || 1BBT2 1FOD2 1l76 164 -16.21 -3.30 3.21e+01 :164 XRAY 1.90 0.167 NA LYSOZYME 1bihA 395 -28.69 -3.30 3.22e+01 :395 XRAY 3.10 0.218 0.264 HEMOLIN || 1BIHB 1oa4A 222 -17.50 -3.29 3.27e+01 :222 XRAY 1.50 0.182 0.193 ENDO-BETA-1,4-GLUCANASE 1cioA 154 -17.18 -3.29 3.30e+01 :154 XRAY 1.60 0.145 0.185 PROTEIN (MYOGLOBIN) 1kkcA 221 -18.60 -3.29 3.30e+01 :221 XRAY 2.00 0.194 0.233 Manganese Superoxide Dismutase || 1KKCB 1KKCX 1KKCY 1onoA 398 -16.69 -3.28 3.32e+01 :398 XRAY 2.50 0.220 0.287 1-deoxy-D-xylulose 5-phosphate reductoisomerase || 1K5HA 1K5HB 1K5HC 1ONNA 1ONNB 1ONOB 1ONPA 1ONPB 1qnnA 191 -18.90 -3.28 3.33e+01 :191 XRAY 1.80 0.179 0.223 SUPEROXIDE DISMUTASE || 1QNNB 1QNNC 1QNND 1bh2 315 -19.33 -3.28 3.33e+01 :315 XRAY 2.10 0.190 0.250 GUANINE NUCLEOTIDE-BINDING PROTEIN 1jvsA 400 -16.69 -3.27 3.39e+01 :400 XRAY 2.20 0.213 0.240 1-deoxy-D-xylulose 5-phosphate reductoisomerase || 1JVSB 1ad2 228 -19.95 -3.26 3.43e+01 :228 XRAY 1.90 0.203 0.270 RIBOSOMAL PROTEIN L1 2mgg 154 -17.62 -3.25 3.46e+01 :154 XRAY 1.80 0.149 NA MYOGLOBIN || 2MGF0 2MGH0 1ch9A 154 -17.21 -3.25 3.49e+01 :154 XRAY 1.80 0.146 0.189 PROTEIN (MYOGLOBIN) 1efxA 278 -21.59 -3.23 3.56e+01 :278 XRAY 3.00 0.212 0.294 HLA-CW3 (HEAVY CHAIN) 1nijA 318 -19.02 -3.23 3.56e+01 :318 XRAY 2.00 0.223 NA Hypothetical protein yjiA 1br1B 150 -18.47 -3.23 3.57e+01 :150 XRAY 3.50 0.227 0.305 MYOSIN || 1BR1D 1BR1F 1BR1H 1BR4B 1BR4D 1BR4F 1BR4H 1I84T 1I84W 1irc 154 -17.15 -3.23 3.58e+01 :154 XRAY 2.17 0.177 NA MYOGLOBIN (METAQUO) 1fjrA 195 -18.55 -3.22 3.64e+01 :195 XRAY 2.30 0.212 0.227 METHUSELAH ECTODOMAIN || 1FJRB 1n8zC 607 -27.48 -3.21 3.66e+01 :607 XRAY 2.52 0.226 0.284 Receptor protein-tyrosine kinase erbB-2 1a6m 151 -16.95 -3.21 3.67e+01 :151 XRAY 1.00 0.127 0.159 MYOGLOBIN || 1A6K0 1A6N0 1eybA 471 -26.44 -3.21 3.67e+01 :471 XRAY 1.90 0.192 0.222 HOMOGENTISATE 1,2-DIOXYGENASE || 1EY2A 1mniA 153 -17.97 -3.21 3.70e+01 :153 XRAY 2.07 0.175 NA MYOGLOBIN || 1MNIB 1fx5A 242 -16.51 -3.19 3.77e+01 :242 XRAY 2.20 0.171 0.217 ANTI-H(O) LECTIN I || 1FX5B 1JXNA 1JXNB 1JXNC 1JXND 1cp5A 154 -17.00 -3.19 3.78e+01 :154 XRAY 2.10 0.147 0.208 PROTEIN (MYOGLOBIN) 1g26A 31 -14.13 -3.19 3.78e+01 :31 NMR NA NA NA GRANULIN A 1bzpA 153 -16.97 -3.18 3.81e+01 :153 XRAY 1.15 0.114 NA PROTEIN (MYOGLOBIN) || 104M0 105M0 1AJG0 1AJH0 1BVC0 1BVD0 1BZ6A 1BZRA 1CQ2A 1DUKA 1EBCA 1F6HA 1HJT0 1IOP0 1JP6A 1JP8A 1JP9A 1JPBA 1L2KA 1MBC0 1MBD0 1MBI0 1MBN0 1MBO0 1MYF0 1SPE0 1SWM0 1VXA0 1VXB0 1VXC0 1VXD0 1VXE0 1VXF0 1VXG0 1VXH0 1YOG0 1YOH0 1YOI0 2CMM0 2MB50 2MYA0 2MYB0 2MYC0 2MYD0 2MYE0 4MBN0 5MBN0 1alvA 173 -18.22 -3.18 3.84e+01 :173 XRAY 1.90 0.190 0.230 CALPAIN || 1ALVB 1ALWA 1ALWB 1NX0A 1NX0B 1NX1A 1NX1B 1NX2A 1NX3A 1e2sP 489 -19.54 -3.18 3.84e+01 :489 XRAY 2.35 0.194 0.236 ARYLSULFATASE A 1fkvA 124 -16.82 -3.18 3.85e+01 :124 XRAY 2.00 0.193 0.292 ALPHA-LACTALBUMIN 1iu8A 206 -17.10 -3.17 3.91e+01 :206 XRAY 1.60 0.189 0.214 Pyrrolidone-carboxylate peptidase || 1IU8B 1lam 484 -27.67 -3.16 3.92e+01 :484 XRAY 1.60 0.172 0.204 LEUCINE AMINOPEPTIDASE || 1LANA 1LCPA 1LCPB 1drs 59 -15.92 -3.16 3.95e+01 :59 NMR NA NA NA DENDROASPIN 1l37 164 -16.29 -3.16 3.95e+01 :164 XRAY 1.85 0.151 NA T4 LYSOZYME 1jpfA 281 -20.05 -3.16 3.96e+01 :281 XRAY 2.18 0.211 0.262 H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, D-B ALPHA CHAIN || 1FG2A 1FG2D 1FG2G 1FG2J 1JPGA 1i7fA 292 -19.13 -3.15 3.96e+01 :292 XRAY 2.70 0.222 0.290 HEAT SHOCK PROTEIN 33 1n3nA 280 -20.03 -3.15 3.98e+01 :280 XRAY 3.00 0.246 0.307 H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, D-B ALPHA CHAIN || 1N3NC 1N3NE 1N3NG 1p7bA 333 -18.66 -3.15 3.99e+01 :333 XRAY 3.65 0.297 0.329 integral membrane channel and cytosolic domains || 1P7BB