Best Alignments for YGR212W

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1l5aA/YGR212W-1l5aA-local-str2-1.5-adpstyle5.a2m 2.0678e-033.7988e-08 c.43.1.2
1l5aA/YGR212W-1l5aA-global-str2-1.5-adpstyle5.a2m 2.0678e-037.5085e-08 c.43.1.2
1l5aA/1l5aA-YGR212W-global-adpstyle5.a2m 2.0678e-034.0340e-07 c.43.1.2
1l5aA/1l5aA-YGR212W-global-adpstyle1.a2m 2.0678e-034.0340e-07 c.43.1.2
1l5aA/YGR212W-1l5aA-local-str-1.5-adpstyle5.a2m 2.0678e-031.2362e-06 c.43.1.2
1l5aA/YGR212W-1l5aA-global-str-1.5-adpstyle5.a2m 2.0678e-032.4190e-06 c.43.1.2
1l5aA/1l5aA-YGR212W-local-adpstyle5.a2m 2.0678e-032.6509e-05 c.43.1.2
1l5aA/1l5aA-YGR212W-local-adpstyle1.a2m 2.0678e-032.6509e-05 c.43.1.2
1l5aA/YGR212W-1l5aA-global-stride-ebghtl-0.3-adpstyle5.a2m 2.0678e-033.6486e-05 c.43.1.2
1l5aA/YGR212W-1l5aA-global-dssp-ebghstl-0.3-adpstyle5.a2m 2.0678e-034.5080e-05 c.43.1.2
1l5aA/YGR212W-1l5aA-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 2.0678e-039.2713e-05 c.43.1.2
1l5aA/YGR212W-1l5aA-global-alpha-0.3-adpstyle5.a2m 2.0678e-031.1044e-04 c.43.1.2
1l5aA/YGR212W-1l5aA-global-str-0.3-adpstyle5.a2m 2.0678e-031.1952e-04 c.43.1.2
1l5aA/YGR212W-1l5aA-local-stride-ebghtl-0.3-adpstyle5.a2m 2.0678e-032.1762e-03 c.43.1.2
1l5aA/YGR212W-1l5aA-local-dssp-ebghstl-0.3-adpstyle5.a2m 2.0678e-032.2606e-03 c.43.1.2
1l5aA/YGR212W-1l5aA-local-str-0.3-adpstyle5.a2m 2.0678e-032.5597e-03 c.43.1.2
1l5aA/YGR212W-1l5aA-global-adpstyle5.a2m 2.0678e-036.8278e-03 c.43.1.2
1l5aA/YGR212W-1l5aA-global-adpstyle1.a2m 2.0678e-036.8278e-03 c.43.1.2
1l5aA/YGR212W-1l5aA-local-alpha-0.3-adpstyle5.a2m 2.0678e-039.6378e-03 c.43.1.2
1l5aA/YGR212W-1l5aA-simplesw-adpstyle5.a2m 2.0678e-032.3043e-02 c.43.1.2
1l5aA/YGR212W-1l5aA-simplesw-adpstyle1.a2m 2.0678e-032.3043e-02 c.43.1.2
1l5aA/YGR212W-1l5aA-local-adpstyle5.a2m 2.0678e-032.3139e-02 c.43.1.2
1l5aA/YGR212W-1l5aA-local-adpstyle1.a2m 2.0678e-032.3139e-02 c.43.1.2
1amj/YGR212W-1amj-global-str2-1.5-adpstyle5.a2m 6.0328e+014.2021e-02 1amj c.8.2.1
c.83.1.1
1amj/YGR212W-1amj-global-str-1.5-adpstyle5.a2m 6.0328e+017.8373e-02 1amj c.8.2.1
c.83.1.1
1amj/YGR212W-1amj-local-str2-1.5-adpstyle5.a2m 6.0328e+011.0318e-01 1amj c.8.2.1
c.83.1.1
1amj/YGR212W-1amj-local-str-1.5-adpstyle5.a2m 6.0328e+015.0020e-01 1amj c.8.2.1
c.83.1.1
1bgp/YGR212W-1bgp-global-alpha-0.3-adpstyle5.a2m 1.7344e+012.7671e+00 1bgp a.93.1.1
1bgp/1bgp-YGR212W-fssp-global-adpstyle5.a2m 1.7344e+014.0251e+00 1bgp a.93.1.1
1bgp/YGR212W-1bgp-global-str2-1.5-adpstyle5.a2m 1.7344e+014.4121e+00 1bgp a.93.1.1
1bgp/YGR212W-1bgp-global-stride-ebghtl-0.3-adpstyle5.a2m 1.7344e+014.6365e+00 1bgp a.93.1.1
1bgp/YGR212W-1bgp-global-str-0.3-adpstyle5.a2m 1.7344e+014.6546e+00 1bgp a.93.1.1
1bgp/YGR212W-1bgp-global-dssp-ebghstl-0.3-adpstyle5.a2m 1.7344e+014.8851e+00 1bgp a.93.1.1
1bgp/1bgp-YGR212W-fssp-local-adpstyle5.a2m 1.7344e+016.2748e+00 1bgp a.93.1.1
1bgp/YGR212W-1bgp-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1.7344e+016.5733e+00 1bgp a.93.1.1
1amj/1amj-YGR212W-fssp-global-adpstyle5.a2m 6.0328e+017.2220e+00 1amj c.8.2.1
c.83.1.1
1bgp/YGR212W-1bgp-global-adpstyle1.a2m 1.7344e+018.6773e+00 1bgp a.93.1.1
1bgp/YGR212W-1bgp-global-adpstyle5.a2m 1.7344e+018.6773e+00 1bgp a.93.1.1
1bgp/YGR212W-1bgp-local-stride-ebghtl-0.3-adpstyle5.a2m 1.7344e+011.0177e+01 1bgp a.93.1.1
1bgp/YGR212W-1bgp-local-dssp-ebghstl-0.3-adpstyle5.a2m 1.7344e+011.0177e+01 1bgp a.93.1.1
1bgp/YGR212W-1bgp-local-str-0.3-adpstyle5.a2m 1.7344e+011.0919e+01 1bgp a.93.1.1
1fiqA/1qj2A-YGR212W-fssp-global-adpstyle5.a2m 5.8300e+011.0974e+01 1qj2A d.15.4.2
a.56.1.1
1jhnA/YGR212W-1jhnA-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 5.9590e+011.2422e+01 b.104.1.1
b.29.1.12
1jbqA/1oasA-YGR212W-fssp-local-adpstyle5.a2m 4.6245e+011.3628e+01 1oasA c.79.1.1
1jbqA/1oasA-YGR212W-fssp-global-adpstyle5.a2m 4.6245e+011.4462e+01 1oasA c.79.1.1
1bgp/YGR212W-1bgp-local-str2-1.5-adpstyle5.a2m 1.7344e+011.4619e+01 1bgp a.93.1.1
1amj/YGR212W-1amj-global-alpha-0.3-adpstyle5.a2m 6.0328e+011.4636e+01 1amj c.8.2.1
c.83.1.1
1fvrA/YGR212W-1fvrA-local-adpstyle1.a2m 2.0724e+011.5179e+01 d.144.1.2
1fvrA/YGR212W-1fvrA-local-adpstyle5.a2m 2.0724e+011.5179e+01 d.144.1.2
1fiqA/1qj2A-YGR212W-fssp-local-adpstyle5.a2m 5.8300e+011.5275e+01 1qj2A d.15.4.2
a.56.1.1
1amj/1amj-YGR212W-fssp-local-adpstyle5.a2m 6.0328e+011.5403e+01 1amj c.8.2.1
c.83.1.1
1fvrA/YGR212W-1fvrA-simplesw-adpstyle1.a2m 2.0724e+011.5495e+01 d.144.1.2
1fvrA/YGR212W-1fvrA-simplesw-adpstyle5.a2m 2.0724e+011.5495e+01 d.144.1.2
1m54A/YGR212W-1m54A-global-adpstyle5.a2m 3.7333e+011.5781e+01 c.79.1.1
1m54A/YGR212W-1m54A-global-adpstyle1.a2m 3.7333e+011.5781e+01 c.79.1.1
1bgp/YGR212W-1bgp-local-alpha-0.3-adpstyle5.a2m 1.7344e+011.5849e+01 1bgp a.93.1.1
1amj/YGR212W-1amj-global-str-0.3-adpstyle5.a2m 6.0328e+011.7701e+01 1amj c.8.2.1
c.83.1.1
1bgp/YGR212W-1bgp-global-str-1.5-adpstyle5.a2m 1.7344e+011.8397e+01 1bgp a.93.1.1
1bgp/1bgp-YGR212W-local-adpstyle1.a2m 1.7344e+012.0346e+01 1bgp a.93.1.1
1bgp/1bgp-YGR212W-local-adpstyle5.a2m 1.7344e+012.0346e+01 1bgp a.93.1.1
1amj/YGR212W-1amj-global-dssp-ebghstl-0.3-adpstyle5.a2m 6.0328e+012.0475e+01 1amj c.8.2.1
c.83.1.1
1amj/YGR212W-1amj-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 6.0328e+012.2254e+01 1amj c.8.2.1
c.83.1.1
1bgp/YGR212W-1bgp-local-adpstyle5.a2m 1.7344e+012.4105e+01 1bgp a.93.1.1
1bgp/YGR212W-1bgp-local-adpstyle1.a2m 1.7344e+012.4105e+01 1bgp a.93.1.1
1bgp/YGR212W-1bgp-simplesw-adpstyle5.a2m 1.7344e+012.6219e+01 1bgp a.93.1.1
1bgp/YGR212W-1bgp-simplesw-adpstyle1.a2m 1.7344e+012.6219e+01 1bgp a.93.1.1
1m54A/YGR212W-1m54A-local-adpstyle1.a2m 3.7333e+013.0812e+01 c.79.1.1
1m54A/YGR212W-1m54A-local-adpstyle5.a2m 3.7333e+013.0812e+01 c.79.1.1
1amj/YGR212W-1amj-local-str-0.3-adpstyle5.a2m 6.0328e+013.2064e+01 1amj c.8.2.1
c.83.1.1
1m54A/YGR212W-1m54A-simplesw-adpstyle1.a2m 3.7333e+013.3645e+01 c.79.1.1
1m54A/YGR212W-1m54A-simplesw-adpstyle5.a2m 3.7333e+013.3645e+01 c.79.1.1
1bgp/YGR212W-1bgp-local-str-1.5-adpstyle5.a2m 1.7344e+013.4146e+01 1bgp a.93.1.1
1amj/YGR212W-1amj-local-stride-ebghtl-0.3-adpstyle5.a2m 6.0328e+013.4500e+01 1amj c.8.2.1
c.83.1.1
1amj/YGR212W-1amj-local-dssp-ebghstl-0.3-adpstyle5.a2m 6.0328e+013.5199e+01 1amj c.8.2.1
c.83.1.1
1j3iA/YGR212W-1j3iA-simplesw-adpstyle1.a2m 4.5153e+013.8481e+01
1j3iA/YGR212W-1j3iA-simplesw-adpstyle5.a2m 4.5153e+013.8481e+01
1amj/YGR212W-1amj-local-alpha-0.3-adpstyle5.a2m 6.0328e+013.8554e+01 1amj c.8.2.1
c.83.1.1
1j3jA/YGR212W-1j3jA-simplesw-adpstyle5.a2m 4.6245e+013.9293e+01
1j3jA/YGR212W-1j3jA-simplesw-adpstyle1.a2m 4.6245e+013.9293e+01
1j3iA/YGR212W-1j3iA-local-adpstyle5.a2m 4.5153e+013.9390e+01
1j3iA/YGR212W-1j3iA-local-adpstyle1.a2m 4.5153e+013.9390e+01
1jhnA/YGR212W-1jhnA-local-str2-1.5-adpstyle5.a2m 5.9590e+013.9699e+01 b.104.1.1
b.29.1.12
1j3jA/YGR212W-1j3jA-local-adpstyle1.a2m 4.6245e+014.0512e+01
1jbqA/YGR212W-1jbqA-local-adpstyle5.a2m 4.6245e+014.0512e+01 1oasA c.79.1.1
1j3jA/YGR212W-1j3jA-local-adpstyle5.a2m 4.6245e+014.0512e+01
1jbqA/YGR212W-1jbqA-local-adpstyle1.a2m 4.6245e+014.0512e+01 1oasA c.79.1.1
1jhnA/YGR212W-1jhnA-local-str-0.3-adpstyle5.a2m 5.9590e+014.2843e+01 b.104.1.1
b.29.1.12
1bgp/1bgp-YGR212W-global-adpstyle1.a2m 1.7344e+014.5278e+01 1bgp a.93.1.1
1bgp/1bgp-YGR212W-global-adpstyle5.a2m 1.7344e+014.5278e+01 1bgp a.93.1.1
1jbqA/YGR212W-1jbqA-simplesw-adpstyle5.a2m 4.6245e+014.5741e+01 1oasA c.79.1.1
1jbqA/YGR212W-1jbqA-simplesw-adpstyle1.a2m 4.6245e+014.5741e+01 1oasA c.79.1.1
1jhnA/YGR212W-1jhnA-local-dssp-ebghstl-0.3-adpstyle5.a2m 5.9590e+014.6584e+01 b.104.1.1
b.29.1.12
1fiqA/YGR212W-1fiqA-global-adpstyle5.a2m 5.8300e+014.6750e+01 1qj2A d.15.4.2
a.56.1.1
1fiqA/YGR212W-1fiqA-global-adpstyle1.a2m 5.8300e+014.6750e+01 1qj2A d.15.4.2
a.56.1.1
1jhnA/YGR212W-1jhnA-local-alpha-0.3-adpstyle5.a2m 5.9590e+015.2604e+01 b.104.1.1
b.29.1.12
1fiqA/YGR212W-1fiqA-local-adpstyle5.a2m 5.8300e+015.3237e+01 1qj2A d.15.4.2
a.56.1.1
1fiqA/YGR212W-1fiqA-local-adpstyle1.a2m 5.8300e+015.3237e+01 1qj2A d.15.4.2
a.56.1.1
1jbqA/YGR212W-1jbqA-global-adpstyle1.a2m 4.6245e+015.3670e+01 1oasA c.79.1.1
1jbqA/YGR212W-1jbqA-global-adpstyle5.a2m 4.6245e+015.3670e+01 1oasA c.79.1.1
1fvrA/YGR212W-1fvrA-global-adpstyle1.a2m 2.0724e+015.3681e+01 d.144.1.2
1fvrA/YGR212W-1fvrA-global-adpstyle5.a2m 2.0724e+015.3681e+01 d.144.1.2
1fiqA/YGR212W-1fiqA-simplesw-adpstyle5.a2m 5.8300e+015.5899e+01 1qj2A d.15.4.2
a.56.1.1
1fiqA/YGR212W-1fiqA-simplesw-adpstyle1.a2m 5.8300e+015.5899e+01 1qj2A d.15.4.2
a.56.1.1
1amj/YGR212W-1amj-global-adpstyle5.a2m 6.0328e+015.6193e+01 1amj c.8.2.1
c.83.1.1
1amj/YGR212W-1amj-global-adpstyle1.a2m 6.0328e+015.6193e+01 1amj c.8.2.1
c.83.1.1
1amj/YGR212W-1amj-global-stride-ebghtl-0.3-adpstyle5.a2m 6.0328e+015.9351e+01 1amj c.8.2.1
c.83.1.1
1jhnA/YGR212W-1jhnA-local-stride-ebghtl-0.3-adpstyle5.a2m 5.9590e+016.9346e+01 b.104.1.1
b.29.1.12
1jhnA/1jhnA-YGR212W-local-adpstyle5.a2m 5.9590e+017.3216e+01 b.104.1.1
b.29.1.12
1jhnA/1jhnA-YGR212W-local-adpstyle1.a2m 5.9590e+017.3216e+01 b.104.1.1
b.29.1.12
1amj/YGR212W-1amj-simplesw-adpstyle1.a2m 6.0328e+018.6384e+01 1amj c.8.2.1
c.83.1.1
1amj/YGR212W-1amj-simplesw-adpstyle5.a2m 6.0328e+018.6384e+01 1amj c.8.2.1
c.83.1.1
1amj/YGR212W-1amj-local-adpstyle5.a2m 6.0328e+019.1262e+01 1amj c.8.2.1
c.83.1.1
1amj/YGR212W-1amj-local-adpstyle1.a2m 6.0328e+019.1262e+01 1amj c.8.2.1
c.83.1.1
1j3iA/YGR212W-1j3iA-global-adpstyle1.a2m 4.5153e+011.0256e+02
1j3iA/YGR212W-1j3iA-global-adpstyle5.a2m 4.5153e+011.0256e+02
1jhnA/1jhnA-YGR212W-global-adpstyle5.a2m 5.9590e+011.0396e+02 b.104.1.1
b.29.1.12
1jhnA/1jhnA-YGR212W-global-adpstyle1.a2m 5.9590e+011.0396e+02 b.104.1.1
b.29.1.12
1j3jA/YGR212W-1j3jA-global-adpstyle1.a2m 4.6245e+011.0520e+02
1j3jA/YGR212W-1j3jA-global-adpstyle5.a2m 4.6245e+011.0520e+02
1amj/1amj-YGR212W-local-adpstyle5.a2m 6.0328e+011.1353e+02 1amj c.8.2.1
c.83.1.1
1amj/1amj-YGR212W-local-adpstyle1.a2m 6.0328e+011.1353e+02 1amj c.8.2.1
c.83.1.1
1jhnA/YGR212W-1jhnA-local-adpstyle1.a2m 5.9590e+011.1640e+02 b.104.1.1
b.29.1.12
1jhnA/YGR212W-1jhnA-local-adpstyle5.a2m 5.9590e+011.1640e+02 b.104.1.1
b.29.1.12
1jhnA/YGR212W-1jhnA-simplesw-adpstyle1.a2m 5.9590e+011.2013e+02 b.104.1.1
b.29.1.12
1jhnA/YGR212W-1jhnA-simplesw-adpstyle5.a2m 5.9590e+011.2013e+02 b.104.1.1
b.29.1.12
1amj/1amj-YGR212W-global-adpstyle1.a2m 6.0328e+011.3402e+02 1amj c.8.2.1
c.83.1.1
1amj/1amj-YGR212W-global-adpstyle5.a2m 6.0328e+011.3402e+02 1amj c.8.2.1
c.83.1.1
1jhnA/YGR212W-1jhnA-global-str2-1.5-adpstyle5.a2m 5.9590e+011.3427e+02 b.104.1.1
b.29.1.12
1jhnA/YGR212W-1jhnA-global-adpstyle5.a2m 5.9590e+011.3447e+02 b.104.1.1
b.29.1.12
1jhnA/YGR212W-1jhnA-global-adpstyle1.a2m 5.9590e+011.3447e+02 b.104.1.1
b.29.1.12
1jhnA/YGR212W-1jhnA-global-alpha-0.3-adpstyle5.a2m 5.9590e+011.3450e+02 b.104.1.1
b.29.1.12
1jhnA/YGR212W-1jhnA-global-str-0.3-adpstyle5.a2m 5.9590e+011.3529e+02 b.104.1.1
b.29.1.12
1jhnA/YGR212W-1jhnA-global-stride-ebghtl-0.3-adpstyle5.a2m 5.9590e+011.3529e+02 b.104.1.1
b.29.1.12
1jhnA/YGR212W-1jhnA-global-dssp-ebghstl-0.3-adpstyle5.a2m 5.9590e+011.3529e+02 b.104.1.1
b.29.1.12

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001