Best Alignments for YGR030C

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1mldA/YGR030C-1mldA-local-str-0.3-adpstyle5.a2m 1mldA/YGR030C-1mldA-local-str-0.3-adpstyle5.al 8.6588e+003.8014e+00 2cmd d.162.1.1
c.2.1.5
1h0xA/YGR030C-1h0xA-local-str-0.3-adpstyle5.a2m 1h0xA/YGR030C-1h0xA-local-str-0.3-adpstyle5.al 9.2544e+009.0154e+00
1e7pA/1qlaA-YGR030C-fssp-local-adpstyle5.a2m 1e7pA/1qlaA-YGR030C-fssp-local-adpstyle5.al 1.8558e+015.0387e+00 1qlaA a.7.3.1
d.168.1.1
c.3.1.4
1preA/YGR030C-1preA-local-str-0.3-adpstyle5.a2m 1preA/YGR030C-1preA-local-str-0.3-adpstyle5.al 2.1052e+011.2646e+01 1preA f.8.1.1
d.169.1.2
1rblA/YGR030C-1rblA-local-adpstyle1.a2m 1rblA/YGR030C-1rblA-local-adpstyle1.al 2.1144e+012.1504e+01 1burA c.1.14.1
d.58.9.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001