Best Alignments for YGR027W-A

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1mhyG/YGR027W-A-1mhyG-local-str-1.5-adpstyle5.a2m 5.4864e+005.7669e-02 1mtyG a.23.3.1
1o4sA/YGR027W-A-1o4sA-global-dssp-ebghstl-0.3-adpstyle5.a2m 1.8495e+017.5937e-02 c.67.1.1
1mhyG/YGR027W-A-1mhyG-local-str2-1.5-adpstyle5.a2m 5.4864e+008.3194e-02 1mtyG a.23.3.1
1mhyG/YGR027W-A-1mhyG-global-str-1.5-adpstyle5.a2m 5.4864e+008.9587e-02 1mtyG a.23.3.1
1o4sA/YGR027W-A-1o4sA-global-str2-1.5-adpstyle5.a2m 1.8495e+019.6450e-02 c.67.1.1
1o4sA/YGR027W-A-1o4sA-global-str2-0.3-adpstyle5.a2m 1.8495e+011.2287e-01 c.67.1.1
1o4sA/YGR027W-A-1o4sA-global-alpha-0.3-adpstyle5.a2m 1.8495e+011.2679e-01 c.67.1.1
1o4sA/YGR027W-A-1o4sA-global-stride-ebghtl-0.3-adpstyle5.a2m 1.8495e+011.3196e-01 c.67.1.1
1mhyG/YGR027W-A-1mhyG-global-str2-1.5-adpstyle5.a2m 5.4864e+001.3577e-01 1mtyG a.23.3.1
1o4sA/YGR027W-A-1o4sA-local-str2-1.5-adpstyle5.a2m 1.8495e+011.6484e-01 c.67.1.1
1rtwA/YGR027W-A-1rtwA-global-str2-1.5-adpstyle5.a2m 2.9531e+011.7971e-01
1mhyG/YGR027W-A-1mhyG-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 5.4864e+002.7655e-01 1mtyG a.23.3.1
1rtwA/YGR027W-A-1rtwA-local-str2-1.5-adpstyle5.a2m 2.9531e+011.0819e+00
1rtwA/YGR027W-A-1rtwA-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 2.9531e+011.5477e+00
1mhyG/1mtyG-YGR027W-A-fssp-global-adpstyle5.a2m 5.4864e+001.6023e+00 1mtyG a.23.3.1
1mhyG/1mtyG-YGR027W-A-fssp-local-adpstyle5.a2m 5.4864e+001.8200e+00 1mtyG a.23.3.1
1qkkA/YGR027W-A-1qkkA-local-str2-1.5-adpstyle5.a2m 4.1292e+011.8698e+00 1dbwA c.23.1.1
1o4sA/YGR027W-A-1o4sA-global-adpstyle5.a2m 1.8495e+012.7480e+00 c.67.1.1
1o4sA/YGR027W-A-1o4sA-global-adpstyle1.a2m 1.8495e+012.7480e+00 c.67.1.1
1o4sA/YGR027W-A-1o4sA-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1.8495e+013.0076e+00 c.67.1.1
1qkkA/YGR027W-A-1qkkA-global-str2-1.5-adpstyle5.a2m 4.1292e+013.1877e+00 1dbwA c.23.1.1
1mhyG/YGR027W-A-1mhyG-global-alpha-0.3-adpstyle5.a2m 5.4864e+003.4779e+00 1mtyG a.23.3.1
1gjyA/YGR027W-A-1gjyA-global-adpstyle5.a2m 2.0399e+013.7930e+00 a.39.1.8
1gjyA/YGR027W-A-1gjyA-global-adpstyle1.a2m 2.0399e+013.7930e+00 a.39.1.8
1mhyG/YGR027W-A-1mhyG-global-str-0.3-adpstyle5.a2m 5.4864e+003.8003e+00 1mtyG a.23.3.1
1mhyG/YGR027W-A-1mhyG-local-str-0.3-adpstyle5.a2m 5.4864e+003.9038e+00 1mtyG a.23.3.1
1rtwA/YGR027W-A-1rtwA-global-str2-0.3-adpstyle5.a2m 2.9531e+014.1080e+00
1rtwA/YGR027W-A-1rtwA-global-dssp-ebghstl-0.3-adpstyle5.a2m 2.9531e+014.1270e+00
1mhyG/YGR027W-A-1mhyG-global-str2-0.3-adpstyle5.a2m 5.4864e+004.8224e+00 1mtyG a.23.3.1
1qkkA/YGR027W-A-1qkkA-local-str-1.5-adpstyle5.a2m 4.1292e+014.8318e+00 1dbwA c.23.1.1
1mhyG/YGR027W-A-1mhyG-local-str2-0.3-adpstyle5.a2m 5.4864e+004.8318e+00 1mtyG a.23.3.1
1mhyG/YGR027W-A-1mhyG-local-stride-ebghtl-0.3-adpstyle5.a2m 5.4864e+004.8958e+00 1mtyG a.23.3.1
1o4sA/YGR027W-A-1o4sA-local-dssp-ebghstl-0.3-adpstyle5.a2m 1.8495e+015.2404e+00 c.67.1.1
1mhyG/YGR027W-A-1mhyG-local-alpha-0.3-adpstyle5.a2m 5.4864e+005.4253e+00 1mtyG a.23.3.1
1mhyG/YGR027W-A-1mhyG-local-dssp-ebghstl-0.3-adpstyle5.a2m 5.4864e+005.6792e+00 1mtyG a.23.3.1
1o4sA/YGR027W-A-1o4sA-local-str2-0.3-adpstyle5.a2m 1.8495e+015.7442e+00 c.67.1.1
1mhyG/YGR027W-A-1mhyG-global-dssp-ebghstl-0.3-adpstyle5.a2m 5.4864e+006.3184e+00 1mtyG a.23.3.1
1o4sA/YGR027W-A-1o4sA-local-alpha-0.3-adpstyle5.a2m 1.8495e+017.0554e+00 c.67.1.1
1o4sA/YGR027W-A-1o4sA-local-stride-ebghtl-0.3-adpstyle5.a2m 1.8495e+017.1317e+00 c.67.1.1
1mhyG/YGR027W-A-1mhyG-global-stride-ebghtl-0.3-adpstyle5.a2m 5.4864e+007.1376e+00 1mtyG a.23.3.1
1rtwA/YGR027W-A-1rtwA-global-stride-ebghtl-0.3-adpstyle5.a2m 2.9531e+017.5837e+00
1v74B/YGR027W-A-1v74B-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 3.9926e+018.2466e+00
1rtwA/YGR027W-A-1rtwA-global-alpha-0.3-adpstyle5.a2m 2.9531e+018.3782e+00
1qkkA/YGR027W-A-1qkkA-local-dssp-ebghstl-0.3-adpstyle5.a2m 4.1292e+019.4466e+00 1dbwA c.23.1.1
1mhyG/YGR027W-A-1mhyG-global-adpstyle5.a2m 5.4864e+009.5331e+00 1mtyG a.23.3.1
1mhyG/YGR027W-A-1mhyG-global-adpstyle1.a2m 5.4864e+009.5331e+00 1mtyG a.23.3.1
1mhyG/YGR027W-A-1mhyG-simplesw-adpstyle5.a2m 5.4864e+009.5436e+00 1mtyG a.23.3.1
1mhyG/YGR027W-A-1mhyG-simplesw-adpstyle1.a2m 5.4864e+009.5436e+00 1mtyG a.23.3.1
1qkkA/YGR027W-A-1qkkA-local-alpha-0.3-adpstyle5.a2m 4.1292e+011.0537e+01 1dbwA c.23.1.1
1v74B/YGR027W-A-1v74B-local-str2-1.5-adpstyle5.a2m 3.9926e+011.1414e+01
1qkkA/YGR027W-A-1qkkA-local-str2-0.3-adpstyle5.a2m 4.1292e+011.1513e+01 1dbwA c.23.1.1
1mhyG/1mhyG-YGR027W-A-global-adpstyle1.a2m 5.4864e+001.1564e+01 1mtyG a.23.3.1
1mhyG/1mhyG-YGR027W-A-global-adpstyle5.a2m 5.4864e+001.1564e+01 1mtyG a.23.3.1
1mhyG/1mhyG-YGR027W-A-local-adpstyle1.a2m 5.4864e+001.1658e+01 1mtyG a.23.3.1
1mhyG/1mhyG-YGR027W-A-local-adpstyle5.a2m 5.4864e+001.1658e+01 1mtyG a.23.3.1
1a6i/2tct-YGR027W-A-fssp-local-adpstyle5.a2m 3.4751e+011.1887e+01 2tct a.121.1.1
a.4.1.9
2trt/2tct-YGR027W-A-fssp-local-adpstyle5.a2m 3.5225e+011.2022e+01 2tct a.121.1.1
a.4.1.9
1qkkA/1dbwA-YGR027W-A-fssp-local-adpstyle5.a2m 4.1292e+011.2145e+01 1dbwA c.23.1.1
1a6i/2tct-YGR027W-A-fssp-global-adpstyle5.a2m 3.4751e+011.2202e+01 2tct a.121.1.1
a.4.1.9
2trt/2tct-YGR027W-A-fssp-global-adpstyle5.a2m 3.5225e+011.2341e+01 2tct a.121.1.1
a.4.1.9
1rtwA/YGR027W-A-1rtwA-local-stride-ebghtl-0.3-adpstyle5.a2m 2.9531e+011.2574e+01
1a4eA/1cf9A-YGR027W-A-fssp-local-adpstyle5.a2m 3.7333e+011.2699e+01 1cf9A e.5.1.1
1qkkA/YGR027W-A-1qkkA-global-str-1.5-adpstyle5.a2m 4.1292e+011.2844e+01 1dbwA c.23.1.1
1a4eA/1cf9A-YGR027W-A-fssp-global-adpstyle5.a2m 3.7333e+011.2973e+01 1cf9A e.5.1.1
1qkkA/YGR027W-A-1qkkA-local-str-0.3-adpstyle5.a2m 4.1292e+011.3048e+01 1dbwA c.23.1.1
1qkkA/1dbwA-YGR027W-A-fssp-global-adpstyle5.a2m 4.1292e+011.3242e+01 1dbwA c.23.1.1
1v74B/YGR027W-A-1v74B-local-dssp-ebghstl-0.3-adpstyle5.a2m 3.9926e+011.3374e+01
1mhyG/YGR027W-A-1mhyG-local-adpstyle5.a2m 5.4864e+001.3391e+01 1mtyG a.23.3.1
1mhyG/YGR027W-A-1mhyG-local-adpstyle1.a2m 5.4864e+001.3391e+01 1mtyG a.23.3.1
1rtwA/YGR027W-A-1rtwA-local-str2-0.3-adpstyle5.a2m 2.9531e+011.4489e+01
1qkkA/YGR027W-A-1qkkA-local-stride-ebghtl-0.3-adpstyle5.a2m 4.1292e+011.4579e+01 1dbwA c.23.1.1
1rtwA/YGR027W-A-1rtwA-local-dssp-ebghstl-0.3-adpstyle5.a2m 2.9531e+011.5527e+01
1gjyA/YGR027W-A-1gjyA-local-adpstyle1.a2m 2.0399e+011.6893e+01 a.39.1.8
1gjyA/YGR027W-A-1gjyA-local-adpstyle5.a2m 2.0399e+011.6893e+01 a.39.1.8
1qkkA/YGR027W-A-1qkkA-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 4.1292e+011.8291e+01 1dbwA c.23.1.1
1v74B/YGR027W-A-1v74B-local-str2-0.3-adpstyle5.a2m 3.9926e+011.8420e+01
1qkkA/YGR027W-A-1qkkA-global-str2-0.3-adpstyle5.a2m 4.1292e+012.1754e+01 1dbwA c.23.1.1
1o4sA/1o4sA-YGR027W-A-global-adpstyle5.a2m 1.8495e+012.2239e+01 c.67.1.1
1o4sA/1o4sA-YGR027W-A-global-adpstyle1.a2m 1.8495e+012.2239e+01 c.67.1.1
1qkkA/YGR027W-A-1qkkA-global-str-0.3-adpstyle5.a2m 4.1292e+012.4192e+01 1dbwA c.23.1.1
1rtwA/YGR027W-A-1rtwA-local-alpha-0.3-adpstyle5.a2m 2.9531e+012.4593e+01
1o4sA/YGR027W-A-1o4sA-local-adpstyle1.a2m 1.8495e+012.5465e+01 c.67.1.1
1o4sA/YGR027W-A-1o4sA-local-adpstyle5.a2m 1.8495e+012.5465e+01 c.67.1.1
1v74B/YGR027W-A-1v74B-global-str2-1.5-adpstyle5.a2m 3.9926e+012.5469e+01
1v74B/YGR027W-A-1v74B-global-dssp-ebghstl-0.3-adpstyle5.a2m 3.9926e+012.8435e+01
1v74B/YGR027W-A-1v74B-local-stride-ebghtl-0.3-adpstyle5.a2m 3.9926e+013.0478e+01
1qkkA/YGR027W-A-1qkkA-local-adpstyle1.a2m 4.1292e+013.2390e+01 1dbwA c.23.1.1
1qkkA/YGR027W-A-1qkkA-local-adpstyle5.a2m 4.1292e+013.2390e+01 1dbwA c.23.1.1
1v74B/YGR027W-A-1v74B-global-str2-0.3-adpstyle5.a2m 3.9926e+013.2632e+01
1o4sA/YGR027W-A-1o4sA-simplesw-adpstyle5.a2m 1.8495e+013.3030e+01 c.67.1.1
1o4sA/YGR027W-A-1o4sA-simplesw-adpstyle1.a2m 1.8495e+013.3030e+01 c.67.1.1
1gjyA/YGR027W-A-1gjyA-simplesw-adpstyle5.a2m 2.0399e+013.3540e+01 a.39.1.8
1gjyA/YGR027W-A-1gjyA-simplesw-adpstyle1.a2m 2.0399e+013.3540e+01 a.39.1.8
1a6i/YGR027W-A-1a6i-local-adpstyle1.a2m 3.4751e+013.3582e+01 2tct a.121.1.1
a.4.1.9
1a6i/YGR027W-A-1a6i-local-adpstyle5.a2m 3.4751e+013.3582e+01 2tct a.121.1.1
a.4.1.9
2trt/YGR027W-A-2trt-local-adpstyle5.a2m 3.5225e+013.4102e+01 2tct a.121.1.1
a.4.1.9
2trt/YGR027W-A-2trt-local-adpstyle1.a2m 3.5225e+013.4102e+01 2tct a.121.1.1
a.4.1.9
1a4eA/YGR027W-A-1a4eA-local-adpstyle5.a2m 3.7333e+013.6499e+01 1cf9A e.5.1.1
1a4eA/YGR027W-A-1a4eA-local-adpstyle1.a2m 3.7333e+013.6499e+01 1cf9A e.5.1.1
1v74B/YGR027W-A-1v74B-local-alpha-0.3-adpstyle5.a2m 3.9926e+013.7876e+01
1o4sA/1o4sA-YGR027W-A-local-adpstyle1.a2m 1.8495e+013.8564e+01 c.67.1.1
1o4sA/1o4sA-YGR027W-A-local-adpstyle5.a2m 1.8495e+013.8564e+01 c.67.1.1
1rtwA/YGR027W-A-1rtwA-global-adpstyle1.a2m 2.9531e+013.8632e+01
1rtwA/YGR027W-A-1rtwA-global-adpstyle5.a2m 2.9531e+013.8632e+01
1qkkA/YGR027W-A-1qkkA-global-alpha-0.3-adpstyle5.a2m 4.1292e+014.0321e+01 1dbwA c.23.1.1
1rtwA/1rtwA-YGR027W-A-global-adpstyle1.a2m 2.9531e+014.3484e+01
1rtwA/1rtwA-YGR027W-A-global-adpstyle5.a2m 2.9531e+014.3484e+01
1qkkA/YGR027W-A-1qkkA-global-dssp-ebghstl-0.3-adpstyle5.a2m 4.1292e+014.5228e+01 1dbwA c.23.1.1
1v74B/YGR027W-A-1v74B-global-stride-ebghtl-0.3-adpstyle5.a2m 3.9926e+015.2356e+01
1v74B/YGR027W-A-1v74B-global-alpha-0.3-adpstyle5.a2m 3.9926e+015.5689e+01
1rtwA/YGR027W-A-1rtwA-simplesw-adpstyle5.a2m 2.9531e+015.5841e+01
1rtwA/YGR027W-A-1rtwA-simplesw-adpstyle1.a2m 2.9531e+015.5841e+01
1qkkA/YGR027W-A-1qkkA-global-stride-ebghtl-0.3-adpstyle5.a2m 4.1292e+015.8532e+01 1dbwA c.23.1.1
1rtwA/YGR027W-A-1rtwA-local-adpstyle1.a2m 2.9531e+016.0061e+01
1rtwA/YGR027W-A-1rtwA-local-adpstyle5.a2m 2.9531e+016.0061e+01
1a6i/YGR027W-A-1a6i-global-adpstyle5.a2m 3.4751e+016.0556e+01 2tct a.121.1.1
a.4.1.9
1a6i/YGR027W-A-1a6i-global-adpstyle1.a2m 3.4751e+016.0556e+01 2tct a.121.1.1
a.4.1.9
2trt/YGR027W-A-2trt-global-adpstyle1.a2m 3.5225e+016.6327e+01 2tct a.121.1.1
a.4.1.9
2trt/YGR027W-A-2trt-global-adpstyle5.a2m 3.5225e+016.6327e+01 2tct a.121.1.1
a.4.1.9
1v74B/YGR027W-A-1v74B-local-adpstyle1.a2m 3.9926e+016.7581e+01
1v74B/YGR027W-A-1v74B-local-adpstyle5.a2m 3.9926e+016.7581e+01
1rtwA/1rtwA-YGR027W-A-local-adpstyle5.a2m 2.9531e+017.2013e+01
1rtwA/1rtwA-YGR027W-A-local-adpstyle1.a2m 2.9531e+017.2013e+01
1a4eA/YGR027W-A-1a4eA-simplesw-adpstyle1.a2m 3.7333e+017.3757e+01 1cf9A e.5.1.1
1a4eA/YGR027W-A-1a4eA-simplesw-adpstyle5.a2m 3.7333e+017.3757e+01 1cf9A e.5.1.1
1qkkA/YGR027W-A-1qkkA-simplesw-adpstyle1.a2m 4.1292e+017.4722e+01 1dbwA c.23.1.1
1qkkA/YGR027W-A-1qkkA-simplesw-adpstyle5.a2m 4.1292e+017.4722e+01 1dbwA c.23.1.1
1a6i/YGR027W-A-1a6i-simplesw-adpstyle1.a2m 3.4751e+017.6992e+01 2tct a.121.1.1
a.4.1.9
1a6i/YGR027W-A-1a6i-simplesw-adpstyle5.a2m 3.4751e+017.6992e+01 2tct a.121.1.1
a.4.1.9
2trt/YGR027W-A-2trt-simplesw-adpstyle5.a2m 3.5225e+017.7803e+01 2tct a.121.1.1
a.4.1.9
2trt/YGR027W-A-2trt-simplesw-adpstyle1.a2m 3.5225e+017.7803e+01 2tct a.121.1.1
a.4.1.9
1qkkA/1qkkA-YGR027W-A-global-adpstyle1.a2m 4.1292e+018.0869e+01 1dbwA c.23.1.1
1qkkA/1qkkA-YGR027W-A-global-adpstyle5.a2m 4.1292e+018.0869e+01 1dbwA c.23.1.1
1qkkA/1qkkA-YGR027W-A-local-adpstyle5.a2m 4.1292e+018.2931e+01 1dbwA c.23.1.1
1qkkA/1qkkA-YGR027W-A-local-adpstyle1.a2m 4.1292e+018.2931e+01 1dbwA c.23.1.1
1v74B/1v74B-YGR027W-A-global-adpstyle5.a2m 3.9926e+018.8072e+01
1v74B/1v74B-YGR027W-A-global-adpstyle1.a2m 3.9926e+018.8072e+01
1v74B/YGR027W-A-1v74B-simplesw-adpstyle1.a2m 3.9926e+019.0005e+01
1v74B/YGR027W-A-1v74B-simplesw-adpstyle5.a2m 3.9926e+019.0005e+01
1v74B/1v74B-YGR027W-A-local-adpstyle1.a2m 3.9926e+019.1330e+01
1v74B/1v74B-YGR027W-A-local-adpstyle5.a2m 3.9926e+019.1330e+01
1v74B/YGR027W-A-1v74B-global-adpstyle1.a2m 3.9926e+019.2465e+01
1v74B/YGR027W-A-1v74B-global-adpstyle5.a2m 3.9926e+019.2465e+01
1qkkA/YGR027W-A-1qkkA-global-adpstyle5.a2m 4.1292e+019.4359e+01 1dbwA c.23.1.1
1qkkA/YGR027W-A-1qkkA-global-adpstyle1.a2m 4.1292e+019.4359e+01 1dbwA c.23.1.1
1a4eA/YGR027W-A-1a4eA-global-adpstyle1.a2m 3.7333e+019.5861e+01 1cf9A e.5.1.1
1a4eA/YGR027W-A-1a4eA-global-adpstyle5.a2m 3.7333e+019.5861e+01 1cf9A e.5.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001