Best Alignments for YGR023W

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1jk7A/1auiA-YGR023W-fssp-global-adpstyle5.a2m 1.1613e+012.1755e+00 1auiA d.159.1.3
1jk7A/1auiA-YGR023W-fssp-local-adpstyle5.a2m 1.1613e+013.4634e+00 1auiA d.159.1.3
1jk7A/YGR023W-1jk7A-local-stride-ebghtl-0.3-adpstyle5.a2m 1.1613e+014.4746e+00 1auiA d.159.1.3
1u32A/YGR023W-1u32A-local-stride-ebghtl-0.3-adpstyle5.a2m 1.3132e+014.6623e+00 d.159.1.3
1jk7A/YGR023W-1jk7A-local-str2-0.3-adpstyle5.a2m 1.1613e+014.6979e+00 1auiA d.159.1.3
1u32A/YGR023W-1u32A-local-str2-0.3-adpstyle5.a2m 1.3132e+014.8148e+00 d.159.1.3
1u32A/YGR023W-1u32A-local-dssp-ebghstl-0.3-adpstyle5.a2m 1.3132e+014.9723e+00 d.159.1.3
1jk7A/YGR023W-1jk7A-local-dssp-ebghstl-0.3-adpstyle5.a2m 1.1613e+015.0269e+00 1auiA d.159.1.3
1fjmA/1auiA-YGR023W-fssp-global-adpstyle5.a2m 3.4489e+015.3891e+00 1auiA d.159.1.3
1jk7A/YGR023W-1jk7A-local-str-0.3-adpstyle5.a2m 1.1613e+015.8716e+00 1auiA d.159.1.3
1jk7A/YGR023W-1jk7A-local-alpha-0.3-adpstyle5.a2m 1.1613e+015.9543e+00 1auiA d.159.1.3
1u32A/YGR023W-1u32A-local-alpha-0.3-adpstyle5.a2m 1.3132e+016.0292e+00 d.159.1.3
1jk7A/YGR023W-1jk7A-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1.1613e+017.1261e+00 1auiA d.159.1.3
1bqhG/1cd8-YGR023W-fssp-local-adpstyle5.a2m 3.0397e+018.1589e+00 1cd8 b.1.1.1
1u32A/YGR023W-1u32A-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1.3132e+018.4812e+00 d.159.1.3
1fjmA/1auiA-YGR023W-fssp-local-adpstyle5.a2m 3.4489e+018.5793e+00 1auiA d.159.1.3
1bqhG/1cd8-YGR023W-fssp-global-adpstyle5.a2m 3.0397e+019.7446e+00 1cd8 b.1.1.1
1jfjA/YGR023W-1jfjA-global-adpstyle1.a2m 2.9843e+011.0147e+01 a.39.1.5
1jfjA/YGR023W-1jfjA-global-adpstyle5.a2m 2.9843e+011.0147e+01 a.39.1.5
1q55A/YGR023W-1q55A-global-adpstyle1.a2m 2.8218e+011.0166e+01 i.20.1.1
1q55A/YGR023W-1q55A-global-adpstyle5.a2m 2.8218e+011.0166e+01 i.20.1.1
1nphA/YGR023W-1nphA-local-adpstyle1.a2m 1.4028e+011.0884e+01 d.109.1.1
1nphA/YGR023W-1nphA-local-adpstyle5.a2m 1.4028e+011.0884e+01 d.109.1.1
1bqhG/YGR023W-1bqhG-local-str2-1.5-adpstyle5.a2m 3.0397e+011.1761e+01 1cd8 b.1.1.1
1d03A/1rcf-YGR023W-fssp-local-adpstyle5.a2m 3.9037e+011.1877e+01 1rcf c.23.5.1
1fjmA/YGR023W-1fjmA-local-stride-ebghtl-0.3-adpstyle5.a2m 3.4489e+011.2058e+01 1auiA d.159.1.3
1r6hA/YGR023W-1r6hA-global-adpstyle5.a2m 3.2277e+011.2154e+01 c.45.1.1
1r6hA/YGR023W-1r6hA-global-adpstyle1.a2m 3.2277e+011.2154e+01 c.45.1.1
1bqhG/YGR023W-1bqhG-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 3.0397e+011.2486e+01 1cd8 b.1.1.1
1d03A/1rcf-YGR023W-fssp-global-adpstyle5.a2m 3.9037e+011.2779e+01 1rcf c.23.5.1
1bqhG/YGR023W-1bqhG-local-str2-0.3-adpstyle5.a2m 3.0397e+011.3103e+01 1cd8 b.1.1.1
1nphA/YGR023W-1nphA-simplesw-adpstyle5.a2m 1.4028e+011.3815e+01 d.109.1.1
1nphA/YGR023W-1nphA-simplesw-adpstyle1.a2m 1.4028e+011.3815e+01 d.109.1.1
1jk7A/YGR023W-1jk7A-local-adpstyle5.a2m 1.1613e+011.4511e+01 1auiA d.159.1.3
1jk7A/YGR023W-1jk7A-local-adpstyle1.a2m 1.1613e+011.4511e+01 1auiA d.159.1.3
1fjmA/YGR023W-1fjmA-local-str2-0.3-adpstyle5.a2m 3.4489e+011.4643e+01 1auiA d.159.1.3
1fjmA/YGR023W-1fjmA-local-dssp-ebghstl-0.3-adpstyle5.a2m 3.4489e+011.5292e+01 1auiA d.159.1.3
1u32A/YGR023W-1u32A-local-adpstyle5.a2m 1.3132e+011.6748e+01 d.159.1.3
1u32A/YGR023W-1u32A-local-adpstyle1.a2m 1.3132e+011.6748e+01 d.159.1.3
1v3aA/YGR023W-1v3aA-global-adpstyle5.a2m 3.1333e+011.6817e+01
1v3aA/YGR023W-1v3aA-global-adpstyle1.a2m 3.1333e+011.6817e+01
1fjmA/YGR023W-1fjmA-local-alpha-0.3-adpstyle5.a2m 3.4489e+011.6921e+01 1auiA d.159.1.3
1bqhG/1bqhG-YGR023W-global-adpstyle1.a2m 3.0397e+011.7347e+01 1cd8 b.1.1.1
1bqhG/1bqhG-YGR023W-global-adpstyle5.a2m 3.0397e+011.7347e+01 1cd8 b.1.1.1
1fjmA/YGR023W-1fjmA-local-str-0.3-adpstyle5.a2m 3.4489e+011.7750e+01 1auiA d.159.1.3
1h1vG/YGR023W-1h1vG-local-adpstyle1.a2m 2.2522e+011.8898e+01 d.109.1.1
1h1vG/YGR023W-1h1vG-local-adpstyle5.a2m 2.2522e+011.8898e+01 d.109.1.1
1vrnL/YGR023W-1vrnL-simplesw-adpstyle5.a2m 2.8411e+011.9084e+01
1vrnL/YGR023W-1vrnL-simplesw-adpstyle1.a2m 2.8411e+011.9084e+01
1bqhG/YGR023W-1bqhG-global-str2-1.5-adpstyle5.a2m 3.0397e+011.9115e+01 1cd8 b.1.1.1
1bqhG/YGR023W-1bqhG-local-alpha-0.3-adpstyle5.a2m 3.0397e+011.9638e+01 1cd8 b.1.1.1
1bqhG/YGR023W-1bqhG-local-dssp-ebghstl-0.3-adpstyle5.a2m 3.0397e+011.9826e+01 1cd8 b.1.1.1
1jk7A/YGR023W-1jk7A-simplesw-adpstyle5.a2m 1.1613e+011.9956e+01 1auiA d.159.1.3
1jk7A/YGR023W-1jk7A-simplesw-adpstyle1.a2m 1.1613e+011.9956e+01 1auiA d.159.1.3
1bqhG/YGR023W-1bqhG-local-str-0.3-adpstyle5.a2m 3.0397e+012.0266e+01 1cd8 b.1.1.1
1jk7A/1jk7A-YGR023W-local-adpstyle5.a2m 1.1613e+012.1548e+01 1auiA d.159.1.3
1jk7A/1jk7A-YGR023W-local-adpstyle1.a2m 1.1613e+012.1548e+01 1auiA d.159.1.3
1bqhG/YGR023W-1bqhG-local-stride-ebghtl-0.3-adpstyle5.a2m 3.0397e+012.2166e+01 1cd8 b.1.1.1
1u32A/YGR023W-1u32A-simplesw-adpstyle5.a2m 1.3132e+012.2999e+01 d.159.1.3
1u32A/YGR023W-1u32A-simplesw-adpstyle1.a2m 1.3132e+012.2999e+01 d.159.1.3
1q55A/YGR023W-1q55A-simplesw-adpstyle1.a2m 2.8218e+012.3585e+01 i.20.1.1
1q55A/YGR023W-1q55A-simplesw-adpstyle5.a2m 2.8218e+012.3585e+01 i.20.1.1
1u32A/1u32A-YGR023W-local-adpstyle1.a2m 1.3132e+012.5684e+01 d.159.1.3
1u32A/1u32A-YGR023W-local-adpstyle5.a2m 1.3132e+012.5684e+01 d.159.1.3
1q55A/YGR023W-1q55A-local-adpstyle1.a2m 2.8218e+012.5778e+01 i.20.1.1
1q55A/YGR023W-1q55A-local-adpstyle5.a2m 2.8218e+012.5778e+01 i.20.1.1
1vrnL/YGR023W-1vrnL-local-adpstyle5.a2m 2.8411e+012.5977e+01
1vrnL/YGR023W-1vrnL-local-adpstyle1.a2m 2.8411e+012.5977e+01
1fjmA/YGR023W-1fjmA-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 3.4489e+012.6115e+01 1auiA d.159.1.3
1jfjA/YGR023W-1jfjA-local-adpstyle5.a2m 2.9843e+012.6147e+01 a.39.1.5
1jfjA/YGR023W-1jfjA-local-adpstyle1.a2m 2.9843e+012.6147e+01 a.39.1.5
1jk7A/1jk7A-YGR023W-global-adpstyle1.a2m 1.1613e+012.6365e+01 1auiA d.159.1.3
1jk7A/1jk7A-YGR023W-global-adpstyle5.a2m 1.1613e+012.6365e+01 1auiA d.159.1.3
1d03A/YGR023W-1d03A-global-adpstyle1.a2m 3.9037e+012.6591e+01 1rcf c.23.5.1
1d03A/YGR023W-1d03A-global-adpstyle5.a2m 3.9037e+012.6591e+01 1rcf c.23.5.1
1h1vG/YGR023W-1h1vG-simplesw-adpstyle5.a2m 2.2522e+012.7342e+01 d.109.1.1
1h1vG/YGR023W-1h1vG-simplesw-adpstyle1.a2m 2.2522e+012.7342e+01 d.109.1.1
1nphA/YGR023W-1nphA-global-adpstyle1.a2m 1.4028e+012.7915e+01 d.109.1.1
1nphA/YGR023W-1nphA-global-adpstyle5.a2m 1.4028e+012.7915e+01 d.109.1.1
1v3aA/YGR023W-1v3aA-local-adpstyle1.a2m 3.1333e+012.9074e+01
1v3aA/YGR023W-1v3aA-local-adpstyle5.a2m 3.1333e+012.9074e+01
1bqhG/YGR023W-1bqhG-global-str-1.5-adpstyle5.a2m 3.0397e+012.9141e+01 1cd8 b.1.1.1
1r6hA/YGR023W-1r6hA-local-adpstyle1.a2m 3.2277e+013.0069e+01 c.45.1.1
1r6hA/YGR023W-1r6hA-local-adpstyle5.a2m 3.2277e+013.0069e+01 c.45.1.1
1v3aA/YGR023W-1v3aA-simplesw-adpstyle1.a2m 3.1333e+013.0824e+01
1v3aA/YGR023W-1v3aA-simplesw-adpstyle5.a2m 3.1333e+013.0824e+01
1h1vG/YGR023W-1h1vG-global-adpstyle5.a2m 2.2522e+013.0858e+01 d.109.1.1
1h1vG/YGR023W-1h1vG-global-adpstyle1.a2m 2.2522e+013.0858e+01 d.109.1.1
1r6hA/YGR023W-1r6hA-simplesw-adpstyle5.a2m 3.2277e+013.2478e+01 c.45.1.1
1r6hA/YGR023W-1r6hA-simplesw-adpstyle1.a2m 3.2277e+013.2478e+01 c.45.1.1
1d03A/YGR023W-1d03A-simplesw-adpstyle1.a2m 3.9037e+013.3680e+01 1rcf c.23.5.1
1d03A/YGR023W-1d03A-simplesw-adpstyle5.a2m 3.9037e+013.3680e+01 1rcf c.23.5.1
1jk7A/YGR023W-1jk7A-global-adpstyle1.a2m 1.1613e+013.3989e+01 1auiA d.159.1.3
1jk7A/YGR023W-1jk7A-global-adpstyle5.a2m 1.1613e+013.3989e+01 1auiA d.159.1.3
1jk7A/YGR023W-1jk7A-global-str-0.3-adpstyle5.a2m 1.1613e+013.3997e+01 1auiA d.159.1.3
1jk7A/YGR023W-1jk7A-local-str-1.5-adpstyle5.a2m 1.1613e+013.4005e+01 1auiA d.159.1.3
1jk7A/YGR023W-1jk7A-global-str-1.5-adpstyle5.a2m 1.1613e+013.4005e+01 1auiA d.159.1.3
1bqhG/YGR023W-1bqhG-simplesw-adpstyle1.a2m 3.0397e+013.4139e+01 1cd8 b.1.1.1
1bqhG/YGR023W-1bqhG-simplesw-adpstyle5.a2m 3.0397e+013.4139e+01 1cd8 b.1.1.1
1u32A/YGR023W-1u32A-local-str2-1.5-adpstyle5.a2m 1.3132e+013.4490e+01 d.159.1.3
1u32A/1u32A-YGR023W-global-adpstyle5.a2m 1.3132e+013.5028e+01 d.159.1.3
1u32A/1u32A-YGR023W-global-adpstyle1.a2m 1.3132e+013.5028e+01 d.159.1.3
1d03A/YGR023W-1d03A-local-adpstyle1.a2m 3.9037e+013.5559e+01 1rcf c.23.5.1
1d03A/YGR023W-1d03A-local-adpstyle5.a2m 3.9037e+013.5559e+01 1rcf c.23.5.1
1jk7A/YGR023W-1jk7A-local-str2-1.5-adpstyle5.a2m 1.1613e+013.5742e+01 1auiA d.159.1.3
1vrnL/YGR023W-1vrnL-global-adpstyle5.a2m 2.8411e+013.5762e+01
1vrnL/YGR023W-1vrnL-global-adpstyle1.a2m 2.8411e+013.5762e+01
1jk7A/YGR023W-1jk7A-global-alpha-0.3-adpstyle5.a2m 1.1613e+013.6393e+01 1auiA d.159.1.3
1jk7A/YGR023W-1jk7A-global-dssp-ebghstl-0.3-adpstyle5.a2m 1.1613e+013.6393e+01 1auiA d.159.1.3
1jk7A/YGR023W-1jk7A-global-str2-1.5-adpstyle5.a2m 1.1613e+013.6393e+01 1auiA d.159.1.3
1jk7A/YGR023W-1jk7A-global-stride-ebghtl-0.3-adpstyle5.a2m 1.1613e+013.6393e+01 1auiA d.159.1.3
1jk7A/YGR023W-1jk7A-global-str2-0.3-adpstyle5.a2m 1.1613e+013.6393e+01 1auiA d.159.1.3
1bqhG/YGR023W-1bqhG-local-adpstyle1.a2m 3.0397e+013.8214e+01 1cd8 b.1.1.1
1bqhG/YGR023W-1bqhG-local-adpstyle5.a2m 3.0397e+013.8214e+01 1cd8 b.1.1.1
1fjmA/YGR023W-1fjmA-local-adpstyle1.a2m 3.4489e+013.9925e+01 1auiA d.159.1.3
1fjmA/YGR023W-1fjmA-local-adpstyle5.a2m 3.4489e+013.9925e+01 1auiA d.159.1.3
1u32A/YGR023W-1u32A-global-adpstyle1.a2m 1.3132e+014.0258e+01 d.159.1.3
1u32A/YGR023W-1u32A-global-adpstyle5.a2m 1.3132e+014.0258e+01 d.159.1.3
1u32A/YGR023W-1u32A-global-str2-0.3-adpstyle5.a2m 1.3132e+014.0319e+01 d.159.1.3
1u32A/YGR023W-1u32A-global-str2-1.5-adpstyle5.a2m 1.3132e+014.0319e+01 d.159.1.3
1u32A/YGR023W-1u32A-global-dssp-ebghstl-0.3-adpstyle5.a2m 1.3132e+014.0319e+01 d.159.1.3
1u32A/YGR023W-1u32A-global-stride-ebghtl-0.3-adpstyle5.a2m 1.3132e+014.0319e+01 d.159.1.3
1u32A/YGR023W-1u32A-global-alpha-0.3-adpstyle5.a2m 1.3132e+014.0319e+01 d.159.1.3
1jfjA/YGR023W-1jfjA-simplesw-adpstyle5.a2m 2.9843e+014.4722e+01 a.39.1.5
1jfjA/YGR023W-1jfjA-simplesw-adpstyle1.a2m 2.9843e+014.4722e+01 a.39.1.5
1fjmA/YGR023W-1fjmA-simplesw-adpstyle1.a2m 3.4489e+014.9238e+01 1auiA d.159.1.3
1fjmA/YGR023W-1fjmA-simplesw-adpstyle5.a2m 3.4489e+014.9238e+01 1auiA d.159.1.3
1bqhG/YGR023W-1bqhG-global-str2-0.3-adpstyle5.a2m 3.0397e+015.1210e+01 1cd8 b.1.1.1
1fjmA/1fjmA-YGR023W-local-adpstyle1.a2m 3.4489e+015.6505e+01 1auiA d.159.1.3
1fjmA/1fjmA-YGR023W-local-adpstyle5.a2m 3.4489e+015.6505e+01 1auiA d.159.1.3
1bqhG/1bqhG-YGR023W-local-adpstyle1.a2m 3.0397e+016.1176e+01 1cd8 b.1.1.1
1bqhG/1bqhG-YGR023W-local-adpstyle5.a2m 3.0397e+016.1176e+01 1cd8 b.1.1.1
1bqhG/YGR023W-1bqhG-global-str-0.3-adpstyle5.a2m 3.0397e+016.3389e+01 1cd8 b.1.1.1
1bqhG/YGR023W-1bqhG-global-dssp-ebghstl-0.3-adpstyle5.a2m 3.0397e+016.4636e+01 1cd8 b.1.1.1
1bqhG/YGR023W-1bqhG-global-adpstyle5.a2m 3.0397e+016.5913e+01 1cd8 b.1.1.1
1bqhG/YGR023W-1bqhG-global-adpstyle1.a2m 3.0397e+016.5913e+01 1cd8 b.1.1.1
1bqhG/YGR023W-1bqhG-global-alpha-0.3-adpstyle5.a2m 3.0397e+017.0221e+01 1cd8 b.1.1.1
1bqhG/YGR023W-1bqhG-local-str-1.5-adpstyle5.a2m 3.0397e+017.0743e+01 1cd8 b.1.1.1
1bqhG/YGR023W-1bqhG-global-stride-ebghtl-0.3-adpstyle5.a2m 3.0397e+017.4709e+01 1cd8 b.1.1.1
1fjmA/1fjmA-YGR023W-global-adpstyle5.a2m 3.4489e+017.9465e+01 1auiA d.159.1.3
1fjmA/1fjmA-YGR023W-global-adpstyle1.a2m 3.4489e+017.9465e+01 1auiA d.159.1.3
1fjmA/YGR023W-1fjmA-global-adpstyle5.a2m 3.4489e+018.4157e+01 1auiA d.159.1.3
1fjmA/YGR023W-1fjmA-global-adpstyle1.a2m 3.4489e+018.4157e+01 1auiA d.159.1.3
1fjmA/YGR023W-1fjmA-global-str-0.3-adpstyle5.a2m 3.4489e+018.4214e+01 1auiA d.159.1.3
1fjmA/YGR023W-1fjmA-global-str-1.5-adpstyle5.a2m 3.4489e+018.4234e+01 1auiA d.159.1.3
1fjmA/YGR023W-1fjmA-local-str-1.5-adpstyle5.a2m 3.4489e+018.4234e+01 1auiA d.159.1.3
1fjmA/YGR023W-1fjmA-local-str2-1.5-adpstyle5.a2m 3.4489e+018.9875e+01 1auiA d.159.1.3
1fjmA/YGR023W-1fjmA-global-stride-ebghtl-0.3-adpstyle5.a2m 3.4489e+019.0150e+01 1auiA d.159.1.3
1fjmA/YGR023W-1fjmA-global-str2-0.3-adpstyle5.a2m 3.4489e+019.0150e+01 1auiA d.159.1.3
1fjmA/YGR023W-1fjmA-global-dssp-ebghstl-0.3-adpstyle5.a2m 3.4489e+019.0150e+01 1auiA d.159.1.3
1fjmA/YGR023W-1fjmA-global-alpha-0.3-adpstyle5.a2m 3.4489e+019.0150e+01 1auiA d.159.1.3
1fjmA/YGR023W-1fjmA-global-str2-1.5-adpstyle5.a2m 3.4489e+019.0150e+01 1auiA d.159.1.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001