Best Alignments for YGR022C

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1in6A/YGR022C-1in6A-global-str-1.5-adpstyle5.a2m 1.0025e+002.8787e-01 1hqcA c.37.1.13
a.4.5.11
1in6A/1hqcA-YGR022C-fssp-global-adpstyle5.a2m 1.0025e+003.1226e-01 1hqcA c.37.1.13
a.4.5.11
1in6A/YGR022C-1in6A-global-alpha-0.3-adpstyle5.a2m 1.0025e+003.8762e-01 1hqcA c.37.1.13
a.4.5.11
1in6A/1hqcA-YGR022C-fssp-local-adpstyle5.a2m 1.0025e+003.8936e-01 1hqcA c.37.1.13
a.4.5.11
1in6A/YGR022C-1in6A-global-stride-ebghtl-0.3-adpstyle5.a2m 1.0025e+004.0456e-01 1hqcA c.37.1.13
a.4.5.11
1in6A/YGR022C-1in6A-global-str-0.3-adpstyle5.a2m 1.0025e+004.0896e-01 1hqcA c.37.1.13
a.4.5.11
1in4A/1hqcA-YGR022C-fssp-global-adpstyle5.a2m 1.5672e+004.5312e-01 1hqcA c.37.1.13
a.4.5.11
1in6A/YGR022C-1in6A-global-dssp-ebghstl-0.3-adpstyle5.a2m 1.0025e+005.1156e-01 1hqcA c.37.1.13
a.4.5.11
1in4A/1hqcA-YGR022C-fssp-local-adpstyle5.a2m 1.5672e+005.6500e-01 1hqcA c.37.1.13
a.4.5.11
1in4A/YGR022C-1in4A-global-stride-ebghtl-0.3-adpstyle5.a2m 1.5672e+006.5575e-01 1hqcA c.37.1.13
a.4.5.11
1in4A/YGR022C-1in4A-global-alpha-0.3-adpstyle5.a2m 1.5672e+006.5908e-01 1hqcA c.37.1.13
a.4.5.11
1in4A/YGR022C-1in4A-global-str-0.3-adpstyle5.a2m 1.5672e+007.2133e-01 1hqcA c.37.1.13
a.4.5.11
1in6A/YGR022C-1in6A-local-str-0.3-adpstyle5.a2m 1.0025e+007.5778e-01 1hqcA c.37.1.13
a.4.5.11
1in6A/YGR022C-1in6A-local-str-1.5-adpstyle5.a2m 1.0025e+007.6046e-01 1hqcA c.37.1.13
a.4.5.11
1in6A/YGR022C-1in6A-local-alpha-0.3-adpstyle5.a2m 1.0025e+008.0462e-01 1hqcA c.37.1.13
a.4.5.11
1in6A/YGR022C-1in6A-local-stride-ebghtl-0.3-adpstyle5.a2m 1.0025e+008.4713e-01 1hqcA c.37.1.13
a.4.5.11
1in4A/YGR022C-1in4A-global-dssp-ebghstl-0.3-adpstyle5.a2m 1.5672e+009.2741e-01 1hqcA c.37.1.13
a.4.5.11
1in6A/YGR022C-1in6A-local-dssp-ebghstl-0.3-adpstyle5.a2m 1.0025e+001.0212e+00 1hqcA c.37.1.13
a.4.5.11
1in4A/YGR022C-1in4A-global-str-1.5-adpstyle5.a2m 1.5672e+001.0646e+00 1hqcA c.37.1.13
a.4.5.11
1in6A/YGR022C-1in6A-global-adpstyle1.a2m 1.0025e+001.1285e+00 1hqcA c.37.1.13
a.4.5.11
1in6A/YGR022C-1in6A-global-adpstyle5.a2m 1.0025e+001.1285e+00 1hqcA c.37.1.13
a.4.5.11
1in6A/YGR022C-1in6A-simplesw-adpstyle5.a2m 1.0025e+001.2276e+00 1hqcA c.37.1.13
a.4.5.11
1in6A/YGR022C-1in6A-simplesw-adpstyle1.a2m 1.0025e+001.2276e+00 1hqcA c.37.1.13
a.4.5.11
1in4A/YGR022C-1in4A-local-str-0.3-adpstyle5.a2m 1.5672e+001.2748e+00 1hqcA c.37.1.13
a.4.5.11
1in4A/YGR022C-1in4A-local-alpha-0.3-adpstyle5.a2m 1.5672e+001.3061e+00 1hqcA c.37.1.13
a.4.5.11
1in6A/YGR022C-1in6A-local-adpstyle5.a2m 1.0025e+001.3668e+00 1hqcA c.37.1.13
a.4.5.11
1in6A/YGR022C-1in6A-local-adpstyle1.a2m 1.0025e+001.3668e+00 1hqcA c.37.1.13
a.4.5.11
1in4A/YGR022C-1in4A-local-stride-ebghtl-0.3-adpstyle5.a2m 1.5672e+001.4507e+00 1hqcA c.37.1.13
a.4.5.11
1in7A/1hqcA-YGR022C-fssp-global-adpstyle5.a2m 6.4112e+001.4657e+00 1hqcA c.37.1.13
a.4.5.11
1in5A/1hqcA-YGR022C-fssp-global-adpstyle5.a2m 6.5389e+001.4900e+00 1hqcA c.37.1.13
a.4.5.11
1j7kA/1hqcA-YGR022C-fssp-global-adpstyle5.a2m 6.5850e+001.4988e+00 1hqcA c.37.1.13
a.4.5.11
1grj/YGR022C-1grj-global-str-1.5-adpstyle5.a2m 1.7490e+011.5089e+00 1grj a.2.1.1
d.26.1.2
1in8A/1hqcA-YGR022C-fssp-global-adpstyle5.a2m 6.7166e+001.5237e+00 1hqcA c.37.1.13
a.4.5.11
1in4A/YGR022C-1in4A-local-str-1.5-adpstyle5.a2m 1.5672e+001.6731e+00 1hqcA c.37.1.13
a.4.5.11
1in4A/YGR022C-1in4A-local-dssp-ebghstl-0.3-adpstyle5.a2m 1.5672e+001.7191e+00 1hqcA c.37.1.13
a.4.5.11
1in7A/1hqcA-YGR022C-fssp-local-adpstyle5.a2m 6.4112e+001.8276e+00 1hqcA c.37.1.13
a.4.5.11
1in5A/1hqcA-YGR022C-fssp-local-adpstyle5.a2m 6.5389e+001.8579e+00 1hqcA c.37.1.13
a.4.5.11
1j7kA/1hqcA-YGR022C-fssp-local-adpstyle5.a2m 6.5850e+001.8688e+00 1hqcA c.37.1.13
a.4.5.11
1in8A/1hqcA-YGR022C-fssp-local-adpstyle5.a2m 6.7166e+001.8999e+00 1hqcA c.37.1.13
a.4.5.11
1in4A/YGR022C-1in4A-global-adpstyle5.a2m 1.5672e+001.9121e+00 1hqcA c.37.1.13
a.4.5.11
1in4A/YGR022C-1in4A-global-adpstyle1.a2m 1.5672e+001.9121e+00 1hqcA c.37.1.13
a.4.5.11
1in4A/YGR022C-1in4A-simplesw-adpstyle1.a2m 1.5672e+002.0921e+00 1hqcA c.37.1.13
a.4.5.11
1in4A/YGR022C-1in4A-simplesw-adpstyle5.a2m 1.5672e+002.0921e+00 1hqcA c.37.1.13
a.4.5.11
1in6A/1in6A-YGR022C-global-adpstyle5.a2m 1.0025e+002.1198e+00 1hqcA c.37.1.13
a.4.5.11
1in6A/1in6A-YGR022C-global-adpstyle1.a2m 1.0025e+002.1198e+00 1hqcA c.37.1.13
a.4.5.11
1in4A/1in4A-YGR022C-global-adpstyle1.a2m 1.5672e+002.2383e+00 1hqcA c.37.1.13
a.4.5.11
1in4A/1in4A-YGR022C-global-adpstyle5.a2m 1.5672e+002.2383e+00 1hqcA c.37.1.13
a.4.5.11
1in4A/YGR022C-1in4A-local-adpstyle5.a2m 1.5672e+002.2936e+00 1hqcA c.37.1.13
a.4.5.11
1in4A/YGR022C-1in4A-local-adpstyle1.a2m 1.5672e+002.2936e+00 1hqcA c.37.1.13
a.4.5.11
1c7nA/YGR022C-1c7nA-global-str-1.5-adpstyle5.a2m 2.0757e+012.5781e+00 1d2fA c.67.1.3
1in6A/1in6A-YGR022C-local-adpstyle5.a2m 1.0025e+002.6448e+00 1hqcA c.37.1.13
a.4.5.11
1in6A/1in6A-YGR022C-local-adpstyle1.a2m 1.0025e+002.6448e+00 1hqcA c.37.1.13
a.4.5.11
1grj/YGR022C-1grj-local-str-1.5-adpstyle5.a2m 1.7490e+013.4237e+00 1grj a.2.1.1
d.26.1.2
1c0pA/YGR022C-1c0pA-global-str-1.5-adpstyle5.a2m 1.8649e+013.6625e+00 1an9A c.4.1.2
d.16.1.3
1in4A/1in4A-YGR022C-local-adpstyle1.a2m 1.5672e+003.7390e+00 1hqcA c.37.1.13
a.4.5.11
1in4A/1in4A-YGR022C-local-adpstyle5.a2m 1.5672e+003.7390e+00 1hqcA c.37.1.13
a.4.5.11
1c0pA/YGR022C-1c0pA-local-str-1.5-adpstyle5.a2m 1.8649e+013.8025e+00 1an9A c.4.1.2
d.16.1.3
1grj/1grj-YGR022C-fssp-global-adpstyle5.a2m 1.7490e+015.0705e+00 1grj a.2.1.1
d.26.1.2
1faaA/1erv-YGR022C-fssp-local-adpstyle5.a2m 1.5278e+015.0949e+00 1erv c.47.1.1
1grj/1grj-YGR022C-fssp-local-adpstyle5.a2m 1.7490e+015.1001e+00 1grj a.2.1.1
d.26.1.2
1faaA/1erv-YGR022C-fssp-global-adpstyle5.a2m 1.5278e+015.6230e+00 1erv c.47.1.1
1c0pA/1an9A-YGR022C-fssp-local-adpstyle5.a2m 1.8649e+015.7727e+00 1an9A c.4.1.2
d.16.1.3
1c0pA/1an9A-YGR022C-fssp-global-adpstyle5.a2m 1.8649e+016.0246e+00 1an9A c.4.1.2
d.16.1.3
1in7A/YGR022C-1in7A-global-adpstyle5.a2m 6.4112e+006.1407e+00 1hqcA c.37.1.13
a.4.5.11
1in7A/YGR022C-1in7A-global-adpstyle1.a2m 6.4112e+006.1407e+00 1hqcA c.37.1.13
a.4.5.11
1c7nA/1d2fA-YGR022C-fssp-global-adpstyle5.a2m 2.0757e+016.2427e+00 1d2fA c.67.1.3
1in5A/YGR022C-1in5A-global-adpstyle5.a2m 6.5389e+006.3179e+00 1hqcA c.37.1.13
a.4.5.11
1in5A/YGR022C-1in5A-global-adpstyle1.a2m 6.5389e+006.3179e+00 1hqcA c.37.1.13
a.4.5.11
1in8A/YGR022C-1in8A-global-adpstyle5.a2m 6.7166e+006.3792e+00 1hqcA c.37.1.13
a.4.5.11
1in8A/YGR022C-1in8A-global-adpstyle1.a2m 6.7166e+006.3792e+00 1hqcA c.37.1.13
a.4.5.11
1j7kA/YGR022C-1j7kA-global-adpstyle5.a2m 6.5850e+006.4637e+00 1hqcA c.37.1.13
a.4.5.11
1j7kA/YGR022C-1j7kA-global-adpstyle1.a2m 6.5850e+006.4637e+00 1hqcA c.37.1.13
a.4.5.11
1in7A/YGR022C-1in7A-simplesw-adpstyle5.a2m 6.4112e+006.7433e+00 1hqcA c.37.1.13
a.4.5.11
1in7A/YGR022C-1in7A-simplesw-adpstyle1.a2m 6.4112e+006.7433e+00 1hqcA c.37.1.13
a.4.5.11
1in5A/YGR022C-1in5A-simplesw-adpstyle1.a2m 6.5389e+006.8914e+00 1hqcA c.37.1.13
a.4.5.11
1in5A/YGR022C-1in5A-simplesw-adpstyle5.a2m 6.5389e+006.8914e+00 1hqcA c.37.1.13
a.4.5.11
1j7kA/YGR022C-1j7kA-simplesw-adpstyle5.a2m 6.5850e+006.9318e+00 1hqcA c.37.1.13
a.4.5.11
1j7kA/YGR022C-1j7kA-simplesw-adpstyle1.a2m 6.5850e+006.9318e+00 1hqcA c.37.1.13
a.4.5.11
1in8A/YGR022C-1in8A-simplesw-adpstyle1.a2m 6.7166e+007.0820e+00 1hqcA c.37.1.13
a.4.5.11
1in8A/YGR022C-1in8A-simplesw-adpstyle5.a2m 6.7166e+007.0820e+00 1hqcA c.37.1.13
a.4.5.11
1faaA/YGR022C-1faaA-global-dssp-ebghstl-0.3-adpstyle5.a2m 1.5278e+017.2946e+00 1erv c.47.1.1
1c7nA/1d2fA-YGR022C-fssp-local-adpstyle5.a2m 2.0757e+017.3972e+00 1d2fA c.67.1.3
1in7A/YGR022C-1in7A-local-adpstyle1.a2m 6.4112e+007.4033e+00 1hqcA c.37.1.13
a.4.5.11
1in7A/YGR022C-1in7A-local-adpstyle5.a2m 6.4112e+007.4033e+00 1hqcA c.37.1.13
a.4.5.11
1in5A/YGR022C-1in5A-local-adpstyle1.a2m 6.5389e+007.5586e+00 1hqcA c.37.1.13
a.4.5.11
1in5A/YGR022C-1in5A-local-adpstyle5.a2m 6.5389e+007.5586e+00 1hqcA c.37.1.13
a.4.5.11
1j7kA/YGR022C-1j7kA-local-adpstyle1.a2m 6.5850e+007.6111e+00 1hqcA c.37.1.13
a.4.5.11
1j7kA/YGR022C-1j7kA-local-adpstyle5.a2m 6.5850e+007.6111e+00 1hqcA c.37.1.13
a.4.5.11
1faaA/YGR022C-1faaA-global-stride-ebghtl-0.3-adpstyle5.a2m 1.5278e+017.7031e+00 1erv c.47.1.1
1in8A/YGR022C-1in8A-local-adpstyle1.a2m 6.7166e+007.7782e+00 1hqcA c.37.1.13
a.4.5.11
1in8A/YGR022C-1in8A-local-adpstyle5.a2m 6.7166e+007.7782e+00 1hqcA c.37.1.13
a.4.5.11
1faaA/YGR022C-1faaA-global-str-1.5-adpstyle5.a2m 1.5278e+019.5650e+00 1erv c.47.1.1
1faaA/YGR022C-1faaA-global-str-0.3-adpstyle5.a2m 1.5278e+011.0093e+01 1erv c.47.1.1
1faaA/YGR022C-1faaA-global-alpha-0.3-adpstyle5.a2m 1.5278e+011.1044e+01 1erv c.47.1.1
1grj/YGR022C-1grj-global-str-0.3-adpstyle5.a2m 1.7490e+011.1046e+01 1grj a.2.1.1
d.26.1.2
1grj/YGR022C-1grj-local-str-0.3-adpstyle5.a2m 1.7490e+011.2245e+01 1grj a.2.1.1
d.26.1.2
1faaA/YGR022C-1faaA-local-str-0.3-adpstyle5.a2m 1.5278e+011.2831e+01 1erv c.47.1.1
1faaA/YGR022C-1faaA-local-stride-ebghtl-0.3-adpstyle5.a2m 1.5278e+011.2894e+01 1erv c.47.1.1
1faaA/YGR022C-1faaA-local-alpha-0.3-adpstyle5.a2m 1.5278e+011.3346e+01 1erv c.47.1.1
1grj/YGR022C-1grj-local-stride-ebghtl-0.3-adpstyle5.a2m 1.7490e+011.6403e+01 1grj a.2.1.1
d.26.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001