Best Alignments for YGR018C

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1gosA/YGR018C-1gosA-local-str-0.3-adpstyle5.a2m 1gosA/YGR018C-1gosA-local-str-0.3-adpstyle5.al 1.6598e+008.8485e-01 c.3.1.2
d.16.1.5
1bcpC/YGR018C-1bcpC-local-str-0.3-adpstyle5.a2m 1bcpC/YGR018C-1bcpC-local-str-0.3-adpstyle5.al 2.7976e+002.7383e+00 1bcpB b.40.2.1
d.169.1.2
1ac6A/YGR018C-1ac6A-local-str-0.3-adpstyle5.a2m 1ac6A/YGR018C-1ac6A-local-str-0.3-adpstyle5.al 5.8856e+003.4457e+00 1tcrA b.1.1.1
3gcb/YGR018C-3gcb-local-str-0.3-adpstyle5.a2m 3gcb/YGR018C-3gcb-local-str-0.3-adpstyle5.al 1.1250e+011.0251e+01 3gcb d.3.1.1
1ueaB/1br9-YGR018C-fssp-global-adpstyle5.a2m 1ueaB/1br9-YGR018C-fssp-global-adpstyle5.al 1.6988e+012.1931e+00 1br9 b.40.3.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001