Best Alignments for YDR527W

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1gw5B/YDR527W-1gw5B-local-str-0.3-adpstyle5.a2m 1gw5B/YDR527W-1gw5B-local-str-0.3-adpstyle5.al 3.2450e+001.4283e+00
1iraY/YDR527W-1iraY-global-adpstyle1.a2m 1iraY/YDR527W-1iraY-global-adpstyle1.al 3.7355e+006.5543e-01 1itbB b.1.1.4
3rlaA/YDR527W-3rlaA-global-adpstyle5.a2m 3rlaA/YDR527W-3rlaA-global-adpstyle5.al 7.0153e+004.9931e-01 1d3vA c.42.1.1
1pbwA/YDR527W-1pbwA-local-str-0.3-adpstyle5.a2m 1pbwA/YDR527W-1pbwA-local-str-0.3-adpstyle5.al 8.6483e+003.2531e+00 1pbwA a.116.1.1
1l5aA/YDR527W-1l5aA-global-str-1.5-adpstyle5.a2m 1l5aA/YDR527W-1l5aA-global-str-1.5-adpstyle5.al 1.1846e+017.3005e-01

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001