Best Alignments for YDR031W

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1kx9A/YDR031W-1kx9A-global-str2-1.5-adpstyle5.a2m 2.0094e+014.8990e-01 a.118.21.1
1hg4A/YDR031W-1hg4A-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 5.2788e+009.2818e-01 1lbd a.123.1.1
1kx9A/YDR031W-1kx9A-local-str2-1.5-adpstyle5.a2m 2.0094e+019.8275e-01 a.118.21.1
1ei0A/1hp8-YDR031W-fssp-global-adpstyle5.a2m 1.8938e+012.1544e+00 1hp8 j.77.1.1
1hg4A/1lbd-YDR031W-fssp-local-adpstyle5.a2m 5.2788e+002.2007e+00 1lbd a.123.1.1
1hg4A/1lbd-YDR031W-fssp-global-adpstyle5.a2m 5.2788e+002.3536e+00 1lbd a.123.1.1
1hg4A/YDR031W-1hg4A-local-str2-1.5-adpstyle5.a2m 5.2788e+002.6625e+00 1lbd a.123.1.1
1q9hA/YDR031W-1q9hA-global-adpstyle1.a2m 3.3505e+013.2381e+00
1q9hA/YDR031W-1q9hA-global-adpstyle5.a2m 3.3505e+013.2381e+00
2madL/2bbkL-YDR031W-fssp-global-adpstyle5.a2m 3.3416e+013.2851e+00 2bbkL g.21.1.1
1mdaL/2bbkL-YDR031W-fssp-global-adpstyle5.a2m 3.4477e+013.3718e+00 2bbkL g.21.1.1
1hg4A/YDR031W-1hg4A-local-str2-0.3-adpstyle5.a2m 5.2788e+003.4756e+00 1lbd a.123.1.1
1hg4A/YDR031W-1hg4A-local-dssp-ebghstl-0.3-adpstyle5.a2m 5.2788e+003.8672e+00 1lbd a.123.1.1
1ei0A/1hp8-YDR031W-fssp-local-adpstyle5.a2m 1.8938e+013.9296e+00 1hp8 j.77.1.1
1kx9A/1kx9A-YDR031W-global-adpstyle1.a2m 2.0094e+013.9331e+00 a.118.21.1
1kx9A/1kx9A-YDR031W-global-adpstyle5.a2m 2.0094e+013.9331e+00 a.118.21.1
1hg4A/YDR031W-1hg4A-local-stride-ebghtl-0.3-adpstyle5.a2m 5.2788e+004.2658e+00 1lbd a.123.1.1
1kx9A/YDR031W-1kx9A-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 2.0094e+015.0594e+00 a.118.21.1
1hg4A/YDR031W-1hg4A-local-alpha-0.3-adpstyle5.a2m 5.2788e+005.3263e+00 1lbd a.123.1.1
1mznA/YDR031W-1mznA-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 2.2952e+015.7810e+00 a.123.1.1
1zs9A/YDR031W-1zs9A-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 2.6824e+016.7062e+00
1kx9A/YDR031W-1kx9A-global-str2-0.3-adpstyle5.a2m 2.0094e+016.7393e+00 a.118.21.1
1hg4A/YDR031W-1hg4A-global-str2-1.5-adpstyle5.a2m 5.2788e+007.5559e+00 1lbd a.123.1.1
1ow5A/YDR031W-1ow5A-local-str2-1.5-adpstyle5.a2m 2.5723e+017.9371e+00 a.60.1.2
1hg4A/YDR031W-1hg4A-local-adpstyle5.a2m 5.2788e+008.1482e+00 1lbd a.123.1.1
1hg4A/YDR031W-1hg4A-local-adpstyle1.a2m 5.2788e+008.1482e+00 1lbd a.123.1.1
2madL/2bbkL-YDR031W-fssp-local-adpstyle5.a2m 3.3416e+018.2482e+00 2bbkL g.21.1.1
1mdaL/2bbkL-YDR031W-fssp-local-adpstyle5.a2m 3.4477e+018.4658e+00 2bbkL g.21.1.1
1zs9A/YDR031W-1zs9A-global-dssp-ebghstl-0.3-adpstyle5.a2m 2.6824e+018.8671e+00
1kx9A/YDR031W-1kx9A-global-dssp-ebghstl-0.3-adpstyle5.a2m 2.0094e+019.1992e+00 a.118.21.1
1ow5A/YDR031W-1ow5A-global-str2-1.5-adpstyle5.a2m 2.5723e+019.5509e+00 a.60.1.2
1zs9A/YDR031W-1zs9A-global-str2-0.3-adpstyle5.a2m 2.6824e+019.9624e+00
1hg4A/1hg4A-YDR031W-global-adpstyle1.a2m 5.2788e+001.0000e+01 1lbd a.123.1.1
1hg4A/1hg4A-YDR031W-global-adpstyle5.a2m 5.2788e+001.0000e+01 1lbd a.123.1.1
1w5mA/YDR031W-1w5mA-global-adpstyle1.a2m 3.4593e+011.0753e+01
1w5mA/YDR031W-1w5mA-global-adpstyle5.a2m 3.4593e+011.0753e+01
1ow5A/YDR031W-1ow5A-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 2.5723e+011.0937e+01 a.60.1.2
1kx9A/YDR031W-1kx9A-global-stride-ebghtl-0.3-adpstyle5.a2m 2.0094e+011.1434e+01 a.118.21.1
1kx9A/YDR031W-1kx9A-global-alpha-0.3-adpstyle5.a2m 2.0094e+011.1905e+01 a.118.21.1
1mvcA/YDR031W-1mvcA-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 3.4112e+011.3792e+01 a.123.1.1
1zs9A/YDR031W-1zs9A-global-stride-ebghtl-0.3-adpstyle5.a2m 2.6824e+011.3835e+01
1hg4A/YDR031W-1hg4A-simplesw-adpstyle5.a2m 5.2788e+001.4628e+01 1lbd a.123.1.1
1hg4A/YDR031W-1hg4A-simplesw-adpstyle1.a2m 5.2788e+001.4628e+01 1lbd a.123.1.1
1zs9A/YDR031W-1zs9A-global-alpha-0.3-adpstyle5.a2m 2.6824e+011.5504e+01
1ei0A/YDR031W-1ei0A-global-adpstyle5.a2m 1.8938e+011.5535e+01 1hp8 j.77.1.1
1ei0A/YDR031W-1ei0A-global-adpstyle1.a2m 1.8938e+011.5535e+01 1hp8 j.77.1.1
1hg4A/1hg4A-YDR031W-local-adpstyle1.a2m 5.2788e+001.5543e+01 1lbd a.123.1.1
1hg4A/1hg4A-YDR031W-local-adpstyle5.a2m 5.2788e+001.5543e+01 1lbd a.123.1.1
1mznA/YDR031W-1mznA-local-str2-1.5-adpstyle5.a2m 2.2952e+011.6528e+01 a.123.1.1
1mznA/YDR031W-1mznA-local-str2-0.3-adpstyle5.a2m 2.2952e+011.6879e+01 a.123.1.1
1ei0A/YDR031W-1ei0A-local-adpstyle1.a2m 1.8938e+011.7219e+01 1hp8 j.77.1.1
1ei0A/YDR031W-1ei0A-local-adpstyle5.a2m 1.8938e+011.7219e+01 1hp8 j.77.1.1
1hg4A/YDR031W-1hg4A-global-dssp-ebghstl-0.3-adpstyle5.a2m 5.2788e+001.8436e+01 1lbd a.123.1.1
1hg4A/YDR031W-1hg4A-global-stride-ebghtl-0.3-adpstyle5.a2m 5.2788e+001.8556e+01 1lbd a.123.1.1
1hg4A/YDR031W-1hg4A-global-str2-0.3-adpstyle5.a2m 5.2788e+001.8750e+01 1lbd a.123.1.1
1kx9A/YDR031W-1kx9A-local-str2-0.3-adpstyle5.a2m 2.0094e+011.8758e+01 a.118.21.1
1hg4A/YDR031W-1hg4A-global-alpha-0.3-adpstyle5.a2m 5.2788e+001.8779e+01 1lbd a.123.1.1
1hg4A/YDR031W-1hg4A-global-adpstyle5.a2m 5.2788e+001.8837e+01 1lbd a.123.1.1
1hg4A/YDR031W-1hg4A-global-adpstyle1.a2m 5.2788e+001.8837e+01 1lbd a.123.1.1
1ow5A/YDR031W-1ow5A-local-dssp-ebghstl-0.3-adpstyle5.a2m 2.5723e+011.9040e+01 a.60.1.2
1mznA/YDR031W-1mznA-local-stride-ebghtl-0.3-adpstyle5.a2m 2.2952e+011.9855e+01 a.123.1.1
1zs9A/YDR031W-1zs9A-local-str2-0.3-adpstyle5.a2m 2.6824e+011.9943e+01
1ow5A/YDR031W-1ow5A-local-str2-0.3-adpstyle5.a2m 2.5723e+012.0421e+01 a.60.1.2
1mznA/YDR031W-1mznA-local-dssp-ebghstl-0.3-adpstyle5.a2m 2.2952e+012.0983e+01 a.123.1.1
1zs9A/YDR031W-1zs9A-local-dssp-ebghstl-0.3-adpstyle5.a2m 2.6824e+012.1147e+01
1zs9A/YDR031W-1zs9A-global-str2-1.5-adpstyle5.a2m 2.6824e+012.1207e+01
1ow5A/YDR031W-1ow5A-global-dssp-ebghstl-0.3-adpstyle5.a2m 2.5723e+012.1868e+01 a.60.1.2
1ow5A/YDR031W-1ow5A-global-str2-0.3-adpstyle5.a2m 2.5723e+012.2119e+01 a.60.1.2
2madL/YDR031W-2madL-global-adpstyle1.a2m 3.3416e+012.2273e+01 2bbkL g.21.1.1
2madL/YDR031W-2madL-global-adpstyle5.a2m 3.3416e+012.2273e+01 2bbkL g.21.1.1
1ow5A/YDR031W-1ow5A-local-stride-ebghtl-0.3-adpstyle5.a2m 2.5723e+012.2685e+01 a.60.1.2
1mvcA/YDR031W-1mvcA-local-str2-1.5-adpstyle5.a2m 3.4112e+012.3182e+01 a.123.1.1
1zs9A/YDR031W-1zs9A-local-str2-1.5-adpstyle5.a2m 2.6824e+012.3225e+01
1kx9A/YDR031W-1kx9A-local-dssp-ebghstl-0.3-adpstyle5.a2m 2.0094e+012.3537e+01 a.118.21.1
1mvcA/YDR031W-1mvcA-local-str2-0.3-adpstyle5.a2m 3.4112e+012.3557e+01 a.123.1.1
1mznA/YDR031W-1mznA-local-alpha-0.3-adpstyle5.a2m 2.2952e+012.3697e+01 a.123.1.1
1kx9A/YDR031W-1kx9A-global-adpstyle5.a2m 2.0094e+012.4621e+01 a.118.21.1
1kx9A/YDR031W-1kx9A-global-adpstyle1.a2m 2.0094e+012.4621e+01 a.118.21.1
1zs9A/YDR031W-1zs9A-local-stride-ebghtl-0.3-adpstyle5.a2m 2.6824e+012.6145e+01
1kx9A/1kx9A-YDR031W-local-adpstyle1.a2m 2.0094e+012.6212e+01 a.118.21.1
1kx9A/1kx9A-YDR031W-local-adpstyle5.a2m 2.0094e+012.6212e+01 a.118.21.1
1ow5A/YDR031W-1ow5A-global-stride-ebghtl-0.3-adpstyle5.a2m 2.5723e+012.7091e+01 a.60.1.2
1ow5A/YDR031W-1ow5A-local-alpha-0.3-adpstyle5.a2m 2.5723e+012.7116e+01 a.60.1.2
1mvcA/YDR031W-1mvcA-local-stride-ebghtl-0.3-adpstyle5.a2m 3.4112e+012.7561e+01 a.123.1.1
1kx9A/YDR031W-1kx9A-local-stride-ebghtl-0.3-adpstyle5.a2m 2.0094e+012.7670e+01 a.118.21.1
2cqqA/YDR031W-2cqqA-local-adpstyle5.a2m 2.8637e+012.7996e+01
2cqqA/YDR031W-2cqqA-local-adpstyle1.a2m 2.8637e+012.7996e+01
1zs9A/YDR031W-1zs9A-global-adpstyle5.a2m 2.6824e+012.8538e+01
1zs9A/YDR031W-1zs9A-global-adpstyle1.a2m 2.6824e+012.8538e+01
1ow5A/YDR031W-1ow5A-global-alpha-0.3-adpstyle5.a2m 2.5723e+012.8736e+01 a.60.1.2
1ow5A/YDR031W-1ow5A-local-adpstyle1.a2m 2.5723e+012.9071e+01 a.60.1.2
1ow5A/YDR031W-1ow5A-local-adpstyle5.a2m 2.5723e+012.9071e+01 a.60.1.2
1mvcA/YDR031W-1mvcA-local-dssp-ebghstl-0.3-adpstyle5.a2m 3.4112e+012.9193e+01 a.123.1.1
1zs9A/YDR031W-1zs9A-local-alpha-0.3-adpstyle5.a2m 2.6824e+012.9566e+01
1kx9A/YDR031W-1kx9A-local-alpha-0.3-adpstyle5.a2m 2.0094e+013.0608e+01 a.118.21.1
2cqqA/YDR031W-2cqqA-global-adpstyle1.a2m 2.8637e+013.0703e+01
2cqqA/YDR031W-2cqqA-global-adpstyle5.a2m 2.8637e+013.0703e+01
1ei0A/YDR031W-1ei0A-simplesw-adpstyle5.a2m 1.8938e+013.1905e+01 1hp8 j.77.1.1
1ei0A/YDR031W-1ei0A-simplesw-adpstyle1.a2m 1.8938e+013.1905e+01 1hp8 j.77.1.1
1w5mA/YDR031W-1w5mA-simplesw-adpstyle5.a2m 3.4593e+013.2200e+01
1w5mA/YDR031W-1w5mA-simplesw-adpstyle1.a2m 3.4593e+013.2200e+01
1mvcA/YDR031W-1mvcA-local-alpha-0.3-adpstyle5.a2m 3.4112e+013.3239e+01 a.123.1.1
2madL/YDR031W-2madL-local-adpstyle1.a2m 3.3416e+013.3513e+01 2bbkL g.21.1.1
2madL/YDR031W-2madL-local-adpstyle5.a2m 3.3416e+013.3513e+01 2bbkL g.21.1.1
1q9hA/YDR031W-1q9hA-local-adpstyle1.a2m 3.3505e+013.3620e+01
1q9hA/YDR031W-1q9hA-local-adpstyle5.a2m 3.3505e+013.3620e+01
1mdaL/YDR031W-1mdaL-local-adpstyle5.a2m 3.4477e+013.4742e+01 2bbkL g.21.1.1
1mdaL/YDR031W-1mdaL-local-adpstyle1.a2m 3.4477e+013.4742e+01 2bbkL g.21.1.1
1w5mA/YDR031W-1w5mA-local-adpstyle1.a2m 3.4593e+013.4888e+01
1w5mA/YDR031W-1w5mA-local-adpstyle5.a2m 3.4593e+013.4888e+01
1kx9A/YDR031W-1kx9A-local-adpstyle5.a2m 2.0094e+013.5343e+01 a.118.21.1
1kx9A/YDR031W-1kx9A-local-adpstyle1.a2m 2.0094e+013.5343e+01 a.118.21.1
1mznA/YDR031W-1mznA-global-str2-1.5-adpstyle5.a2m 2.2952e+013.9007e+01 a.123.1.1
1kx9A/YDR031W-1kx9A-simplesw-adpstyle1.a2m 2.0094e+014.1807e+01 a.118.21.1
1kx9A/YDR031W-1kx9A-simplesw-adpstyle5.a2m 2.0094e+014.1807e+01 a.118.21.1
1mznA/1mznA-YDR031W-global-adpstyle5.a2m 2.2952e+014.1953e+01 a.123.1.1
1mznA/1mznA-YDR031W-global-adpstyle1.a2m 2.2952e+014.1953e+01 a.123.1.1
1mznA/YDR031W-1mznA-local-adpstyle5.a2m 2.2952e+014.2476e+01 a.123.1.1
1mznA/YDR031W-1mznA-local-adpstyle1.a2m 2.2952e+014.2476e+01 a.123.1.1
1ow5A/YDR031W-1ow5A-global-adpstyle5.a2m 2.5723e+014.6142e+01 a.60.1.2
1ow5A/YDR031W-1ow5A-global-adpstyle1.a2m 2.5723e+014.6142e+01 a.60.1.2
1mdaL/YDR031W-1mdaL-simplesw-adpstyle5.a2m 3.4477e+014.7934e+01 2bbkL g.21.1.1
1mdaL/YDR031W-1mdaL-simplesw-adpstyle1.a2m 3.4477e+014.7934e+01 2bbkL g.21.1.1
1mznA/YDR031W-1mznA-simplesw-adpstyle5.a2m 2.2952e+014.8367e+01 a.123.1.1
1mznA/YDR031W-1mznA-simplesw-adpstyle1.a2m 2.2952e+014.8367e+01 a.123.1.1
1q9hA/YDR031W-1q9hA-simplesw-adpstyle5.a2m 3.3505e+014.8879e+01
1q9hA/YDR031W-1q9hA-simplesw-adpstyle1.a2m 3.3505e+014.8879e+01
1mdaL/YDR031W-1mdaL-global-adpstyle1.a2m 3.4477e+014.9279e+01 2bbkL g.21.1.1
1mdaL/YDR031W-1mdaL-global-adpstyle5.a2m 3.4477e+014.9279e+01 2bbkL g.21.1.1
1mvcA/1mvcA-YDR031W-global-adpstyle5.a2m 3.4112e+015.1416e+01 a.123.1.1
1mvcA/1mvcA-YDR031W-global-adpstyle1.a2m 3.4112e+015.1416e+01 a.123.1.1
1mznA/1mznA-YDR031W-local-adpstyle1.a2m 2.2952e+015.3994e+01 a.123.1.1
1mznA/1mznA-YDR031W-local-adpstyle5.a2m 2.2952e+015.3994e+01 a.123.1.1
1zs9A/YDR031W-1zs9A-local-adpstyle1.a2m 2.6824e+015.5436e+01
1zs9A/YDR031W-1zs9A-local-adpstyle5.a2m 2.6824e+015.5436e+01
1mvcA/YDR031W-1mvcA-local-adpstyle1.a2m 3.4112e+015.9094e+01 a.123.1.1
1mvcA/YDR031W-1mvcA-local-adpstyle5.a2m 3.4112e+015.9094e+01 a.123.1.1
1mznA/YDR031W-1mznA-global-str2-0.3-adpstyle5.a2m 2.2952e+016.2602e+01 a.123.1.1
2madL/YDR031W-2madL-simplesw-adpstyle5.a2m 3.3416e+016.3135e+01 2bbkL g.21.1.1
2madL/YDR031W-2madL-simplesw-adpstyle1.a2m 3.3416e+016.3135e+01 2bbkL g.21.1.1
1mznA/YDR031W-1mznA-global-alpha-0.3-adpstyle5.a2m 2.2952e+016.3300e+01 a.123.1.1
1mznA/YDR031W-1mznA-global-adpstyle1.a2m 2.2952e+016.3610e+01 a.123.1.1
1mznA/YDR031W-1mznA-global-adpstyle5.a2m 2.2952e+016.3610e+01 a.123.1.1
1mznA/YDR031W-1mznA-global-dssp-ebghstl-0.3-adpstyle5.a2m 2.2952e+016.3912e+01 a.123.1.1
1mznA/YDR031W-1mznA-global-stride-ebghtl-0.3-adpstyle5.a2m 2.2952e+016.4109e+01 a.123.1.1
1ow5A/YDR031W-1ow5A-simplesw-adpstyle1.a2m 2.5723e+016.4711e+01 a.60.1.2
1ow5A/YDR031W-1ow5A-simplesw-adpstyle5.a2m 2.5723e+016.4711e+01 a.60.1.2
1zs9A/1zs9A-YDR031W-local-adpstyle5.a2m 2.6824e+016.4898e+01
1zs9A/1zs9A-YDR031W-local-adpstyle1.a2m 2.6824e+016.4898e+01
1ow5A/1ow5A-YDR031W-local-adpstyle1.a2m 2.5723e+016.7121e+01 a.60.1.2
1ow5A/1ow5A-YDR031W-local-adpstyle5.a2m 2.5723e+016.7121e+01 a.60.1.2
1mvcA/YDR031W-1mvcA-simplesw-adpstyle5.a2m 3.4112e+016.7291e+01 a.123.1.1
1mvcA/YDR031W-1mvcA-simplesw-adpstyle1.a2m 3.4112e+016.7291e+01 a.123.1.1
2cqqA/YDR031W-2cqqA-simplesw-adpstyle5.a2m 2.8637e+016.9556e+01
2cqqA/YDR031W-2cqqA-simplesw-adpstyle1.a2m 2.8637e+016.9556e+01
1zs9A/1zs9A-YDR031W-global-adpstyle5.a2m 2.6824e+016.9592e+01
1zs9A/1zs9A-YDR031W-global-adpstyle1.a2m 2.6824e+016.9592e+01
1zs9A/YDR031W-1zs9A-simplesw-adpstyle1.a2m 2.6824e+017.0378e+01
1zs9A/YDR031W-1zs9A-simplesw-adpstyle5.a2m 2.6824e+017.0378e+01
1ow5A/1ow5A-YDR031W-global-adpstyle1.a2m 2.5723e+017.0605e+01 a.60.1.2
1ow5A/1ow5A-YDR031W-global-adpstyle5.a2m 2.5723e+017.0605e+01 a.60.1.2
1mvcA/1mvcA-YDR031W-local-adpstyle1.a2m 3.4112e+017.1281e+01 a.123.1.1
1mvcA/1mvcA-YDR031W-local-adpstyle5.a2m 3.4112e+017.1281e+01 a.123.1.1
1mvcA/YDR031W-1mvcA-global-str2-1.5-adpstyle5.a2m 3.4112e+018.4282e+01 a.123.1.1
1mvcA/YDR031W-1mvcA-global-alpha-0.3-adpstyle5.a2m 3.4112e+018.8211e+01 a.123.1.1
1mvcA/YDR031W-1mvcA-global-str2-0.3-adpstyle5.a2m 3.4112e+018.8211e+01 a.123.1.1
1mvcA/YDR031W-1mvcA-global-adpstyle5.a2m 3.4112e+018.8497e+01 a.123.1.1
1mvcA/YDR031W-1mvcA-global-adpstyle1.a2m 3.4112e+018.8497e+01 a.123.1.1
1mvcA/YDR031W-1mvcA-global-dssp-ebghstl-0.3-adpstyle5.a2m 3.4112e+018.9192e+01 a.123.1.1
1mvcA/YDR031W-1mvcA-global-stride-ebghtl-0.3-adpstyle5.a2m 3.4112e+018.9192e+01 a.123.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001