Best Alignments for YDL013W

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1jm7A/YDL013W-1jm7A-local-str-0.3-adpstyle5.a2m 1jm7A/YDL013W-1jm7A-local-str-0.3-adpstyle5.al 1.8475e+001.6920e+00 g.44.1.1
1bpoA/YDL013W-1bpoA-local-str-0.3-adpstyle5.a2m 1bpoA/YDL013W-1bpoA-local-str-0.3-adpstyle5.al 3.5165e+003.6946e-01 1bpoA a.118.1.4
b.69.6.1
1fbvA/YDL013W-1fbvA-global-adpstyle1.a2m 1fbvA/YDL013W-1fbvA-global-adpstyle1.al 7.6532e+001.7226e+00 2cblA g.44.1.1
d.93.1.1
a.39.1.7
a.48.1.1
1rdg/YDL013W-1rdg-local-str-0.3-adpstyle5.a2m 1rdg/YDL013W-1rdg-local-str-0.3-adpstyle5.al 8.6983e+004.2358e+00 1rb9 g.41.5.1
1dd1B/1ygs-YDL013W-fssp-local-adpstyle5.a2m 1dd1B/1ygs-YDL013W-fssp-local-adpstyle5.al 1.3137e+014.7098e+00 1ygs b.26.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001