| gene | class | score | Locus Name | GeneProduct |
| YPL204W | -1 | -0.0998 | HRR25 | casein kinase I isoform |
| YCL067C | -1 | -0.187 | alpha2 | |
| YLL021W | -1 | -0.202 | spa2 | spindle pole antigen |
| YHR005C | -1 | -0.316 | GPA1 | alpha subunit of G protein coupled to mating factor receptors |
| YDL102W | -1 | -0.32 | cdc2 | largest and catalytic subunit of DNA polymerase III (delta) |
| YLR384C | -1 | -0.324 | IKI3 | |
| YNL103W | -1 | -0.36 | met4 | member of the leucine zipper family of transcriptional activators |
| YAL043C | -1 | -0.36 | pta1 | |
| YBL021C | -1 | -0.368 | HAP3 | transcriptional activator protein of CYC1 |
| YPR034W | -1 | -0.394 | ARP7 | actin related protein, subunit of the chromatin remodeling Snf\/Swi complex |
| YBL014C | -1 | -0.405 | RRN6 | member of yeast Pol I core factor (CF) also composed of Rrn11p, Rrn7p and TATA-binding protein |
| YOL140W | -1 | -0.425 | arg8 | Acetylornithine aminotransferase |
| YGL237C | -1 | -0.434 | hap2 | transcriptional activator protein of CYC1 |
| YNR017W | -1 | -0.442 | MAS6 | 23 kDa mitochondrial inner membrane protein |
| YOL012C | -1 | -0.473 | HTA3 | An evolutionarily conserved member of the histone H2A F\/Z family of histone variants |
| YNL216W | -1 | -0.483 | rap1 | repressor activator protein |
| YMR164C | -1 | -0.491 | MSS11 | Predicted 758 amino acid polypeptide with poly-glutamine and poly-asparagine domains |
| YGL112C | -1 | -0.496 | TAF60 | TATA-binding protein-associated-factor |
| YBL079W | -1 | -0.503 | NUP170 | Nucleoporin highly similar to Nup157p and to mammalian Nup155p (nup170 mutant can be complemented with NUP155) |
| YEL012W | -1 | -0.505 | UBC8 | ubiquitin-conjugating enzyme\; ubiquitin-protein ligase |
| YDR143C | -1 | -0.528 | san1 | (putative) transcriptional regulator |
| YNL039W | -1 | -0.531 | TFC5 | 90 kd subunit of TFIIIB, also called TFIIIB90 or B'' or B''90 component |
| YBL058W | -1 | -0.533 | SHP1 | |
| YJL157C | -1 | -0.535 | FAR1 | Cdc28p kinase inhibitor |
| YLR092W | -1 | -0.55 | SUL2 | high affinity sulfate permease |
| YDR075W | -1 | -0.55 | pph3 | protein phosphatase type 2A |
| YKL020C | -1 | -0.552 | SPT23 | |
| YDR189W | -1 | -0.559 | SLY1 | |
| YGR041W | -1 | -0.567 | BUD9 | |
| YAL021C | -1 | -0.569 | ccr4 | 95 kDa containng leucine rich tandem repeats |
| YJL056C | -1 | -0.57 | ZAP1 | Metalloregulatory protein involved in zinc-responsive transcriptional regulation |
| YOR290C | -1 | -0.572 | snf2 | transcriptional regulator |
| YKL032C | -1 | -0.572 | IXR1 | intrastrand crosslink recognition protein |
| YPL187W | -1 | -0.575 | mf(alpha)1 | mating factor alpha |
| YJL194W | -1 | -0.577 | cdc6 | pre-initiation complex component |
| YJR137C | -1 | -0.58 | ECM17 | Putative sulfite reductase |
| YLR430W | -1 | -0.59 | sen1 | component of a nuclear-localized tRNA splicing complex |
| YKR097W | -1 | -0.593 | pck1 | phosphoenolpyruvate carboxylkinase |
| YER070W | -1 | -0.599 | RNR1 | ribonucleotide reductase |
| YNL052W | -1 | -0.611 | COX5A | Cytochrome-c oxidase chain Va |
| YFL021W | -1 | -0.611 | GAT1 | transcriptional activator with GATA-1-type Zn finger DNA-binding motif |
| YFL050C | -1 | -0.618 | ALR2 | (putative) ion transporter |
| YLR451W | -1 | -0.623 | leu3 | zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type |
| YOR330C | -1 | -0.629 | mip1 | catalytic subunit of mitochondrial DNA polymerase |
| YKL185W | -1 | -0.629 | ASH1 | |
| YPL179W | -1 | -0.639 | PPQ1 | protein phosphatase Q |
| YOL006C | -1 | -0.644 | top1 | topoisomerase I |
| YOL021C | -1 | -0.647 | DIS3 | 3'-5' exoribonuclease complex subunit |
| YNL327W | -1 | -0.651 | EGT2 | |
| YKR099W | 1 | -0.651 | bas1 | transcription factor |
| YOL130W | -1 | -0.656 | ALR1 | putative ion transporter |
| YNL126W | -1 | -0.664 | SPC98 | spindle pole body component, associates in a complex with Spc97p and Tub4p perhaps as part of the microtubule attachment site of the SBP |
| YER047C | -1 | -0.664 | SAP1 | member of the AAA ATPase family of proteins |
| YLR067C | -1 | -0.666 | PET309 | |
| YJL187C | -1 | -0.671 | SWE1 | protein kinase homolog |
| YDL101C | -1 | -0.671 | dun1 | protein kinase |
| YDR234W | -1 | -0.677 | lys4 | homoaconitase |
| YDR145W | -1 | -0.679 | TAF61 | TFIID subunit |
| YDL140C | -1 | -0.682 | rpo21 | RNA polymerase II large subunit |
| YCR042C | -1 | -0.682 | TSM1 | TATA binding protein-associated factor (TAF) |
| YGR233C | -1 | -0.683 | pho81 | |
| YOL135C | -1 | -0.687 | MED7 | Stoichiometric member of mediator complex |
| YDL127W | -1 | -0.691 | PCL2 | G1 cyclin |
| YER129W | -1 | -0.694 | PAK1 | |
| YMR182C | -1 | -0.696 | RGM1 | Putative transcriptional repressor with proline-rich zinc fingers |
| YGL254W | -1 | -0.702 | FZF1 | putative transcription factor, has five zinc fingers |
| YKL210W | -1 | -0.706 | UBA1 | ubiquitin activating enzyme, similar to Uba2p |
| YLR439W | -1 | -0.708 | MRPL4 | Mitochondrial 60S ribosomal protein L4 |
| YPR010C | -1 | -0.709 | ||
| YDR364C | -1 | -0.713 | cdc40 | Member of the beta transducin family |
| YDL080C | -1 | -0.713 | THI3 | alpha-ketoisocaproate carboxylase |
| YDL059C | -1 | -0.723 | RAD59 | The RAD59 gene product has homology to the Rad52 protein. |
| YMR037C | -1 | -0.724 | MSN2 | zinc finger protein |
| YNL329C | -1 | -0.726 | PEX6 | Member of the AAA-protein family that includes NSFp and PEX1p |
| YLR212C | -1 | -0.729 | TUB4 | gamma tubulin-like protein, interacts with Spc98p and Spc97p, the Tub4p-Spc98p-Spc97p complex may be part of the microtubule attachment site at the spindle pole body |
| YFR040W | -1 | -0.729 | SAP155 | |
| YCL066W | -1 | -0.729 | HMLalpha1 | transcripton factor involved in the regulation of the alpha-specific genes |
| YNL238W | -1 | -0.733 | kex2 | Ca2+-dependent serine protease |
| YPL175W | -1 | -0.734 | spt14 | N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein |
| YPL253C | -1 | -0.735 | VIK1 | Cik1p homolog |
| YER105C | -1 | -0.738 | NUP157 | Nucleoporin similar to Nup157p and to mammalian Nup155p |
| YLR452C | -1 | -0.747 | sst2 | member of the RGS (regulator of G-protein signalling) family\; GTPase-activating protein |
| YIL046W | -1 | -0.747 | MET30 | Met30p contains five copies of WD40 motif and interacts with and regulates Met4p |
| YPL254W | -1 | -0.751 | HFI1 | transcription factor, member of Ada\/Gcn5 protein complex |
| YNR023W | -1 | -0.751 | SNF12 | 73 kDa subunit of the SWI\/SNF transcription activation complex, homolog of Rsc6p subunit of the RSC chromatin remodeling complex |
| YPL118W | -1 | -0.752 | MRP51 | Component of small subunit of the mitochondrial ribosome |
| YPL023C | -1 | -0.755 | MET12 | putative methylenetetrahydrofolate reductase (mthfr) |
| YFR049W | -1 | -0.755 | YMR31 | mitochondrial ribosomal protein (precursor) |
| YOR229W | -1 | -0.759 | WTM2 | Transcriptional modulator |
| YER159C | -1 | -0.767 | BUR6 | Transcriptional regulator which functions in modulating the activity of the general transcription machinery in vivo |
| YNL023C | -1 | -0.775 | FAP1 | Transcription factor homolog\; similarity to Drosophila melanogaster shuttle craft protein\; similarity to human NFX1 protein\; similarity to human DNA-binding protein tenascin |
| YLR188W | -1 | -0.777 | MDL1 | |
| YPL022W | -1 | -0.778 | rad1 | UV endonuclease |
| YGR092W | -1 | -0.78 | dbf2 | Serine\/threonine protein kinase |
| YPR104C | 1 | -0.786 | FHL1 | Protein with a domain similar to the fork head DNA-binding domain found in the developmental fork head protein of Drosophila melanogaster and in the HNF-3 family of hepatocyte mammalian transcription factors. |
| YJL176C | -1 | -0.787 | SWI3 | transcription factor |
| YJL179W | -1 | -0.801 | PFD1 | Putative homolog of subunit 1 of bovine prefoldin, a chaperone comprised of six subunits |
| YBR055C | -1 | -0.804 | prp6 | RNA splicing factor |
| YGL014W | -1 | -0.808 | ||
| YKL101W | -1 | -0.809 | HSL1 | Putative protein kinase homologous to S. pombe cdr1\/nim1 |
| YOR188W | -1 | -0.81 | msb1 | |
| YEL056W | -1 | -0.811 | HAT2 | subunit of a cytoplasmic histone acetyltransferase |
| YHR084W | 1 | -0.813 | ste12 | Transcription factor |
| YBR170C | -1 | -0.814 | NPL4 | |
| YGR186W | -1 | -0.816 | TFG1 | Transcription factor TFIIF large subunit |
| YKR008W | -1 | -0.818 | RSC4 | Member of RSC complex. |
| YNR052C | -1 | -0.819 | POP2 | Putative transcription factor |
| YNL251C | -1 | -0.821 | NRD1 | |
| YDR216W | -1 | -0.821 | adr1 | positive transcriptional regulator of ADH2 and peroxisomal protein genes |
| YNL118C | -1 | -0.822 | PSU1 | |
| YDR261C | -1 | -0.823 | exg2 | Exo-1,3-b-glucanase |
| YHL025W | -1 | -0.824 | SNF6 | subunit of the chromatin remodeling Snf\/Swi complex |
| YDL128W | -1 | -0.824 | VCX1 | vacuolar H+\/Ca2+ exchanger |
| YLL022C | -1 | -0.827 | HIF1 | |
| YBL008W | -1 | -0.828 | HIR1 | putative repressor protein homologous to yeast Tup1p and mammalian retinal transducin\; contains nuclear targeting signal |
| YOR043W | -1 | -0.831 | whi2 | |
| YDR195W | -1 | -0.831 | REF2 | |
| YPL127C | -1 | -0.835 | HHO1 | histone H1 |
| YDR171W | -1 | -0.836 | HSP42 | |
| YDR227W | -1 | -0.838 | sir4 | regulator of silent mating loci |
| YDR405W | -1 | -0.841 | MRP20 | 263-amino acid mitochondrial ribosomal large subunit protein\; similar to L23 family of ribosomal proteins |
| YOR098C | -1 | -0.843 | nup1 | nuclear pore complex protein |
| YBL020W | -1 | -0.846 | rft1 | 67 kDa integral membrane protein |
| YOR321W | -1 | -0.847 | PMT3 | dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase |
| YIL098C | -1 | -0.848 | FMC1 | |
| YHR058C | -1 | -0.849 | MED6 | |
| YBR112C | -1 | -0.85 | cyc8 | |
| YNL148C | -1 | -0.851 | ALF1 | cofactor B |
| YDL132W | -1 | -0.851 | cdc53 | |
| YJL063C | -1 | -0.852 | MRPL8 | Mitochondrial ribosomal protein MRPL8 (YmL8) (E. coli L17) |
| YJL042W | -1 | -0.852 | MHP1 | Putative microtubule-associated protein (MAP) |
| YDL197C | -1 | -0.855 | asf2 | |
| YOR373W | -1 | -0.86 | NUD1 | nuclesome assembly protein I |
| YML049C | -1 | -0.86 | rse1 | |
| YCR035C | -1 | -0.861 | RRP43 | Component of the exosome 3->5 exoribonuclease complex with Rrp4p, Rrp41p, Rrp42p and Dis3p (Rrp44p). |
| YIL101C | -1 | -0.865 | XBP1 | transcriptional repressor |
| YER154W | -1 | -0.866 | oxa1 | |
| YPL161C | -1 | -0.868 | BEM4 | |
| YJL013C | -1 | -0.868 | MAD3 | spindle checkpoint complex subunit |
| YCR066W | -1 | -0.869 | RAD18 | Zn finger protein, putative ATPase |
| YDR427W | -1 | -0.871 | RPN9 | Subunit of the regulatory particle of the proteasome |
| YDR292C | -1 | -0.871 | SRP101 | signal recognition particle receptor - alpha subunit |
| YML121W | -1 | -0.872 | gtr1 | Putative small GTPase |
| YPL256C | -1 | -0.873 | CLN2 | G(sub)1 cyclin |
| YDL020C | -1 | -0.874 | RPN4 | |
| YBR129C | -1 | -0.874 | OPY1 | |
| YHR164C | -1 | -0.876 | DNA2 | DNA replication helicase |
| YGL233W | -1 | -0.878 | SEC15 | 113kD component of the Exocyst complex, which contains the gene products encoded by SEC3, SEC5, SEC6, SEC8, SEC10, SEC15 and EXO70. |
| YBR192W | -1 | -0.878 | RIM2 | |
| YBR279W | -1 | -0.88 | PAF1 | |
| YDL210W | -1 | -0.881 | uga4 | GABA-specific transport protein |
| YER040W | -1 | -0.882 | gln3 | Transcriptional activator of nitrogen-regulated genes |
| YOR244W | -1 | -0.884 | ESA1 | Acetyltransferase in the SAS gene family |
| YJL110C | -1 | -0.889 | GZF3 | GATA zinc finger protein 3 homologous to Dal80 in structure and function |
| YLR244C | -1 | -0.892 | MAP1 | methionine aminopeptidase |
| YDR076W | -1 | -0.894 | rad55 | RecA homolog (related to DMC1, RAD51, RAD57), interacts with Rad51p and Rad57p by two-hybrid analysis |
| YIR011C | -1 | -0.895 | STS1 | |
| YDR192C | -1 | -0.897 | NUP42 | 42-kD protein associated with nuclear pore complexes\; Nup42p is structurally related to the FG-nucleoporin family of pore proteins |
| YOR003W | -1 | -0.898 | YSP3 | subtilisin-like protease III |
| YOL004W | -1 | -0.898 | sin3 | DNA binding protein involved in transcriptional regulation |
| YPL011C | -1 | -0.899 | TAF47 | component of TAF(II) complex |
| YMR004W | -1 | -0.899 | MVP1 | peripheral Golgi membrane protein |
| YFL037W | -1 | -0.901 | tub2 | beta-tubulin |
| YIR032C | -1 | -0.903 | dal3 | ureidoglycolate hydrolase |
| YBL052C | -1 | -0.903 | SAS3 | |
| YNL016W | -1 | -0.904 | PUB1 | poly(A)+ RNA-binding protein |
| YGL203C | -1 | -0.904 | kex1 | carboxypeptidase B-like processing protease |
| YLR032W | -1 | -0.905 | RAD5 | putative ATPase\/DNA helicase |
| YBR142W | -1 | -0.909 | mak5 | |
| YOL110W | -1 | -0.91 | SHR5 | |
| YNL061W | -1 | -0.91 | NOP2 | 90-kDa protein, located in nucleolus, that is homologous to a human proliferation-associated nucleolar protein, p120 |
| YPL086C | -1 | -0.912 | HPA1 | histone acetyltransferase complex subunit |
| YER170W | -1 | -0.912 | adk2 | Adenylate kinase (mitochondrial GTP:AMP phosphotransferase) |
| YDR252W | -1 | -0.913 | BTT1 | |
| YER073W | -1 | -0.914 | ALD5 | mitochondrial Aldehyde Dehydrogenase |
| YAL041W | -1 | -0.914 | cdc24 | Guanine nucleotide exchange factor (a.k.a. GDP-release factor) for cdc42 |
| YAL001C | -1 | -0.915 | TFC3 | transcription factor tau (TFIIIC) subunit 138 |
| YMR203W | -1 | -0.916 | TOM40 | Mitochondrial outer membrane protein\; forms the outer membrane import channel |
| YGR231C | -1 | -0.916 | PHB2 | mitochondrial protein, prohibitin homolog\; homolog of mammalian BAP37 and S. cerevisiae Phb1p |
| YCL055W | -1 | -0.917 | KAR4 | transcription factor involved in karyogamy |
| YJR090C | -1 | -0.918 | grr1 | |
| YHR047C | -1 | -0.92 | AAP1' | arginine\/alanine aminopeptidase |
| YOR027W | -1 | -0.921 | STI1 | Heat shock protein also induced by canavanine and entry into stationary phase |
| YBR195C | -1 | -0.922 | msi1 | p50 subunit of the yeast Chromatin Assembly Factor-I (CAF-I) negative regulator of ras-mediated cAMP induction\; homologous to beta subunit of GTP-binding proteins |
| YER017C | -1 | -0.924 | AFG3 | ATP-dependent metalloprotease |
| YNL142W | -1 | -0.925 | MEP2 | Ammonia transport protein |
| YER114C | -1 | -0.925 | BOI2 | |
| YOL123W | -1 | -0.927 | HRP1 | |
| YJR103W | -1 | -0.927 | URA8 | CTP synthase |
| YCL001W | -1 | -0.927 | RER1 | |
| YGR009C | -1 | -0.928 | SEC9 | Putative t-SNARE of the plasma membrane |
| YMR186W | -1 | -0.929 | HSC82 | constitutively expressed heat shock protein |
| YNR049C | -1 | -0.93 | MSO1 | small hydrophilic protein, enriched in microsomal membrane fraction, interacts with Sec1p |
| YLR163C | -1 | -0.93 | MAS1 | mitochondrial processing protease subunit |
| YJL117W | -1 | -0.933 | PHO86 | Putative inorganic phosphate transporter |
| YGR084C | -1 | -0.933 | MRP13 | 35 kDa mitochondrial ribosomal small subunit protein |
| YLR116W | -1 | -0.934 | MSL5 | |
| YJL087C | -1 | -0.934 | TRL1 | tRNA ligase |
| YEL055C | -1 | -0.936 | POL5 | |
| YDR277C | -1 | -0.939 | MTH1 | Protein is 61\% identical to Msn3p |
| YJL088W | -1 | -0.94 | arg3 | Ornithine carbamoyltransferase |
| YEL032W | -1 | -0.94 | mcm3 | |
| YKR054C | -1 | -0.942 | DYN1 | heavy chain of cytoplasmic dynein |
| YDL049C | -1 | -0.943 | KNH1 | KRE9 homolog |
| YOR307C | -1 | -0.944 | SLY41 | homolog of chloroplast phosphate transporter |
| YMR179W | -1 | -0.944 | spt21 | non-specific DNA binding protein |
| YDL052C | -1 | -0.944 | SLC1 | putative 1-acyl-sn-gylcerol-3-phosphate acyl transferase |
| YGL090W | -1 | -0.945 | LIF1 | |
| YML120C | -1 | -0.946 | NDI1 | mitochondrial NADH ubiquinone 6 oxidoreductase |
| YKL205W | -1 | -0.946 | LOS1 | |
| YBR090C-A | -1 | -0.948 | ||
| YPL219W | -1 | -0.951 | PCL8 | cyclin (Pho85p) |
| YJR147W | 1 | -0.951 | HMS2 | heat shock transcription factor homolog |
| YHL004W | -1 | -0.951 | MRP4 | mitochondrial ribosomal protein, homologous to E. coli ribosomal protein S2, component of the 37 S subunit of mitochondrial ribosomes |
| YBR045C | -1 | -0.951 | GIP1 | |
| YMR129W | -1 | -0.952 | POM152 | Nuclear pore membrane glycoprotein |
| YER098W | -1 | -0.953 | UBP9 | ubiquitin carboxyl-terminal hydrolase |
| YER065C | -1 | -0.953 | ICL1 | isocitrate lyase |
| YBL097W | -1 | -0.953 | BRN1 | |
| YGL025C | -1 | -0.955 | PGD1 | |
| YKR001C | -1 | -0.956 | VPS1 | putative GTP-binding protein\; similar to mammalian Mx proteins |
| YIL168W | -1 | -0.956 | SDL1 | L-serine dehydratase |
| YBL033C | -1 | -0.957 | rib1 | GTP cyclohydrolase II |
| YKL191W | -1 | -0.959 | DPH2 | |
| YIL159W | -1 | -0.959 | BNR1 | |
| YDR256C | -1 | -0.961 | CTA1 | catalase A |
| YJR019C | -1 | -0.964 | TES1 | peroxisomal acyl-CoA thioesterase |
| YJL115W | -1 | -0.964 | asf1 | |
| YJL090C | -1 | -0.965 | DPB11 | DNA polymerase II complex |
| YML010W | -1 | -0.966 | spt5 | transcription factor |
| YLR103C | -1 | -0.966 | CDC45 | Chromosomal DNA replication initiation protein |
| YDR448W | -1 | -0.966 | ADA2 | transcription factor, member of ADA and SAGA, two transcriptional adaptor\/HAT (histone acetyltransferase)complexes |
| YKL208W | -1 | -0.967 | CBT1 | |
| YLR286C | -1 | -0.97 | CTS1 | Endochitinase |
| YNL048W | -1 | -0.973 | ALG11 | |
| YHR006W | -1 | -0.973 | STP2 | |
| YLR377C | -1 | -0.974 | FBP1 | fructose-1,6-bisphosphatase |
| YNR041C | -1 | -0.977 | COQ2 | para hydroxybenzoate: polyprenyl transferase |
| YGR108W | -1 | -0.977 | CLB1 | G(sub)2-specific B-type cyclin |
| YLL026W | -1 | -0.979 | hsp104 | 104 kDa heat shock protein |
| YOL096C | -1 | -0.98 | COQ3 | 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase |
| YBR133C | -1 | -0.98 | HSL7 | |
| YOL001W | -1 | -0.984 | pho80 | The Pho80p Cyclin |
| YNL277W | -1 | -0.984 | met2 | homoserine O-trans-acetylase |
| YKL201C | -1 | -0.985 | mnn4 | |
| YIR006C | -1 | -0.985 | PAN1 | |
| YDR390C | -1 | -0.987 | UBA2 | |
| YOR151C | -1 | -0.988 | RPB2 | second largest subunit of RNA polymerase II |
| YDL154W | -1 | -0.988 | MSH5 | MutS homolog involved in chromosome exchange |
| YOL051W | -1 | -0.99 | gal11 | Component of the RNA polymerase II holoenzyme complex, positive and negative transcriptional regulator of genes involved in mating-type specialization |
| YHR061C | -1 | -0.99 | GIC1 | |
| YBR257W | -1 | -0.99 | POP4 | |
| YLR025W | -1 | -0.992 | snf7 | |
| YGR194C | -1 | -0.992 | ||
| YCR024C | -1 | -0.992 | ||
| YMR001C | -1 | -0.993 | cdc5 | protein kinase which functions at the G(sub)2\/M boundary |
| YCR039C | 1 | -0.993 | alpha2 | |
| YNR058W | -1 | -0.994 | BIO3 | 7,8-diamino-pelargonic acid aminotransferase (DAPA) aminotransferase |
| YMR072W | -1 | -0.994 | ABF2 | HMG-1 homolog, mitochondrial |
| YGR044C | -1 | -0.994 | rme1 | zinc finger protein\; negative regulator of meiosis\; directly repressed by a1-a2 regulator |
| YBR115C | -1 | -0.994 | lys2 | alpha aminoadipate reductase |
| YBR067C | -1 | -0.995 | TIP1 | cell wall mannoprotein |
| YBR023C | -1 | -0.998 | chs3 | chitin synthase 3 |
| YHR119W | -1 | -0.999 | SET1 | |
| YOL025W | -1 | -1 | LAG2 | |
| YMR246W | -1 | -1 | FAA4 | long-chain fatty acid--CoA ligase and synthetase 4 |
| YKL198C | -1 | -1 | PTK1 | |
| YHL028W | -1 | -1 | WSC4 | Putative integral membrane protein containing novel cysteine motif. Similarity to SLG1 (WSC1), WSC2 and WSC3 |
| YDR058C | -1 | -1 | TGL2 | Triglyceride Lipase |
| YBR275C | -1 | -1 | RIF1 | RAP1-interacting factor, involved in establishment of repressed chromatin |
| YPL144W | -1 | -1.01 | SNR17B | encodes snRNA U3, SNR17A also encodes snRNA U3 |
| YNL252C | -1 | -1.01 | ||
| YGR078C | -1 | -1.01 | PAC10 | Polypeptide 3 of a Yeast Non-native Actin Binding Complex, homolog of a component of the bovine NABC complex |
| YGL207W | -1 | -1.01 | spt16 | transcription factor |
| YGL195W | -1 | -1.01 | GCN1 | translational activator of GCN4 through activation of GCN2 in response to starvation |
| YGL187C | -1 | -1.01 | COX4 | subunit IV of cytochrome c oxidase |
| YDR082W | -1 | -1.01 | STN1 | |
| YBR123C | -1 | -1.01 | TFC1 | transcription factor tau (TFIIIC) subunit 95 |
| YBL088C | -1 | -1.01 | tel1 | putative phosphatidylinositol kinase |
| YBL002W | -1 | -1.01 | HTB2 | Histone H2B (HTB1 and HTB2 code for nearly identical proteins) |
| YPL190C | -1 | -1.02 | NAB3 | nuclear polyadenylated RNA\/single strand DNA-binding protein |
| YNL066W | -1 | -1.02 | SUN4 | |
| YMR128W | -1 | -1.02 | ECM16 | |
| YMR109W | -1 | -1.02 | MYO5 | myosin I |
| YJL102W | -1 | -1.02 | MEF2 | mitochondrial elongation factor G-like protein |
| YHR055C | -1 | -1.02 | CUP1 | copper-binding metallothionein |
| YGR253C | -1 | -1.02 | PUP2 | Proteasome subunit |
| YDR232W | -1 | -1.02 | hem1 | 5-aminolevulinate synthase |
| YBR146W | -1 | -1.02 | MRPS9 | Probable mitochondrial ribosomal protein S9 |
| YPR190C | -1 | -1.03 | RPC82 | 82-kDa subunit of RNA polymerase III (C) |
| YPR047W | -1 | -1.03 | MSF1 | alpha subunit of yeast mitochondrial phenylalanyl-tRNA synthetase |
| YNL106C | -1 | -1.03 | INP52 | inositol polyphosphate 5-phosphatase |
| YLR436C | -1 | -1.03 | ECM30 | |
| YJL203W | -1 | -1.03 | PRP21 | RNA splicing factor |
| YIL150C | -1 | -1.03 | DNA43 | |
| YGR274C | -1 | -1.03 | TAF145 | |
| YBR198C | -1 | -1.03 | TAF90 | |
| YBR131W | -1 | -1.03 | CCZ1 | |
| YBR037C | -1 | -1.03 | SCO1 | inner mitochondrial membrane protein |
| YPR191W | -1 | -1.04 | QCR2 | 40 kDa ubiquinol cytochrome-c reductase core protein 2 |
| YPR163C | -1 | -1.04 | TIF3 | Translation initiation factor eIF-4B |
| YNR015W | -1 | -1.04 | smm1 | |
| YNL117W | -1 | -1.04 | MLS1 | carbon-catabolite sensitive malate synthase |
| YMR064W | -1 | -1.04 | AEP1 | basic, hydrophilic protein of 59 kDa |
| YLR438W | -1 | -1.04 | car2 | ornithine aminotransferase |
| YLR383W | -1 | -1.04 | RHC18 | |
| YKL048C | -1 | -1.04 | ELM1 | protein kinase |
| YJR095W | -1 | -1.04 | ACR1 | protein related to mitochondrial carriers |
| YIR033W | -1 | -1.04 | MGA2 | |
| YHR200W | -1 | -1.04 | RPN10 | homolog of the mammalian S5a protein, component of 26S proteasome |
| YHL027W | -1 | -1.04 | RIM101 | |
| YGL022W | -1 | -1.04 | STT3 | |
| YFR052W | -1 | -1.04 | RPN12 | cytoplasmic 32 - 34 kDa protein |
| YDL224C | -1 | -1.04 | WHI4 | Possible RNA binding protein. Homolog of Whi3. |
| YDL160C | -1 | -1.04 | DHH1 | |
| YBR201W | -1 | -1.04 | DER1 | |
| YBR065C | -1 | -1.04 | ECM2 | |
| YBL016W | -1 | -1.04 | FUS3 | cdc2+\/CDC28 related kinase with positive role in conjugation |
| YPL259C | -1 | -1.05 | APM1 | medium subunit of the clathrin-associated protein complex |
| YOR340C | -1 | -1.05 | RPA43 | DNA-dependent RNA polymerase I subunit A43 |
| YOR335C | -1 | -1.05 | ALA1 | Cytoplasmic alanyl-tRNA synthetase gene |
| YNR038W | -1 | -1.05 | DBP6 | putative RNA helicase |
| YNL316C | -1 | -1.05 | pha2 | prephenate dehydratase |
| YNL221C | -1 | -1.05 | POP1 | Component of nuclear RNase P and RNase MRP |
| YMR036C | -1 | -1.05 | MIH1 | homolog of S. pombe cdc25 |
| YKL192C | -1 | -1.05 | ACP1 | mitochondrial acyl carrier protein |
| YIR021W | -1 | -1.05 | mrs1 | |
| YHR077C | -1 | -1.05 | NMD2 | |
| YHR069C | -1 | -1.05 | RRP4 | 3->5 exoribonuclease\; Component of the exosome 3->5 exonuclease complex with Rrp41p, Rrp42p, Rrp43p and Dis3p (Rrp44p). |
| YER161C | -1 | -1.05 | spt2 | non-specific DNA binding protein (sin1) |
| YER151C | -1 | -1.05 | UBP3 | Ubiquitin-specific protease |
| YER015W | -1 | -1.05 | FAA2 | Acyl-CoA synthetase (fatty acid activator 2) |
| YDR172W | -1 | -1.05 | sup35 | putative translation factor |
| YDL205C | -1 | -1.05 | HEM3 | phorphobilinogen deaminase (uroporphyrinogen synthase), the third step in heme biosynthesis |
| YDL164C | -1 | -1.05 | cdc9 | DNA ligase |
| YCL029C | -1 | -1.05 | BIK1 | |
| YCL027W | -1 | -1.05 | FUS1 | serine\/threonine-rich membrane protein |
| YAL039C | -1 | -1.05 | cyc3 | cytochrome c heme lyase (CCHL) |
| YOR259C | -1 | -1.06 | RPT4 | ATPase\; component of the 26S proteasome cap subunit |
| YNL076W | -1 | -1.06 | MKS1 | negative regulator of Ras cAMP pathway, shares weak homology with Spt2p |
| YNL054W | -1 | -1.06 | VAC7 | |
| YMR070W | -1 | -1.06 | MOT3 | 2 Cys2-His2 zinc fingers at c-terminus, glutamine and asparagine rich |
| YML113W | -1 | -1.06 | DAT1 | datin, an oligo(dA).oligo(dT)-binding protein |
| YLR216C | -1 | -1.06 | CPR6 | |
| YLR195C | -1 | -1.06 | nmt1 | N-myristoyl transferase |
| YLR055C | -1 | -1.06 | spt8 | transcription factor, probable member of histone acetyltransferase SAGA complex |
| YKL015W | -1 | -1.06 | put3 | zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type |
| YJR131W | -1 | -1.06 | MNS1 | specific alpha-mannosidase |
| YIR028W | -1 | -1.06 | dal4 | allantoin permease |
| YIR018W | -1 | -1.06 | YAP5 | bZIP transcription factor |
| YHR189W | -1 | -1.06 | ||
| YGR055W | -1 | -1.06 | MUP1 | high affinity methionine permease |
| YGL201C | -1 | -1.06 | MCM6 | |
| YGL122C | -1 | -1.06 | NAB2 | nuclear polyadenylated RNA binding protein |
| YFR034C | -1 | -1.06 | pho4 | myc-type helix-loop-helix transcription factor |
| YER095W | -1 | -1.06 | rad51 | RecA homolog\; Rad51p colocalizes to ~ 65 spots with Dmc1p prior to synapsis (independently of ZIP1 and DMC1), and interacts with Rad52p and Rad55p\; human Rad51p homolog interacts with Brca2 protein which has been implicated in causing breast cancer |
| YDR481C | -1 | -1.06 | pho8 | repressible alkaline phosphatase |
| YDL150W | -1 | -1.06 | RPC53 | RNA polymerase III (C) subunit, homologus to human BN51 protein |
| YDL106C | 1 | -1.06 | grf10 | Homeobox-domain containing transcription fractor which is a positive regulator of PHO5 and other genes. |
| YCR084C | -1 | -1.06 | tup1 | glucose repression regulatory protein, exhibits similarity to beta subunits of G proteins |
| YBR294W | -1 | -1.06 | SUL1 | |
| YBR282W | -1 | -1.06 | MRPL27 | Mitochondrial ribosomal protein MRPL27 (YmL27) |
| YPR108W | -1 | -1.07 | RPN7 | Subunit of the regulatory particle of the proteasome |
| YOR367W | -1 | -1.07 | SCP1 | Calponin homolog |
| YNL229C | -1 | -1.07 | ure2 | transcriptional regulator, putative glutathione transferase |
| YML069W | -1 | -1.07 | POB3 | binds DNA polymerase delta |
| YML032C | -1 | -1.07 | rad52 | Interacts with Rad51p by two hybrid analysis. mRNA is induced in meiosis during recombination |
| YLR119W | -1 | -1.07 | SRN2 | |
| YLL008W | -1 | -1.07 | DRS1 | putative ATP dependent RNA helicase |
| YJL159W | -1 | -1.07 | HSP150 | Heat shock protein, secretory glycoprotein |
| YHR039C | -1 | -1.07 | ||
| YGR229C | -1 | -1.07 | SMI1 | 57 kDa nuclear protein |
| YGR188C | -1 | -1.07 | BUB1 | Serine\/threonine protein kinase required for cell cycle arrest in response to loss of microtubule function |
| YGL229C | -1 | -1.07 | SAP4 | |
| YGL012W | -1 | -1.07 | ERG4 | Sterol C-24 reductase |
| YFR025C | -1 | -1.07 | his2 | Histidinolphosphatase |
| YFR004W | -1 | -1.07 | RPN11 | Similar to S. pombe PAD1 gene product |
| YER122C | -1 | -1.07 | GLO3 | Zinc-finger-containing protein with similarity to Gcs1p and Sps18p |
| YER091C | -1 | -1.07 | met6 | vitamin B12-(cobalamin)-independent isozyme of methionine synthase (also called N5-methyltetrahydrofolate homocysteine methyltransferase or 5-methyltetrahydropteroyl triglutamate homocysteine methyltransferase) |
| YEL042W | -1 | -1.07 | GDA1 | Guanosine diphosphatase of Golgi membrane |
| YDR362C | -1 | -1.07 | TFC6 | 91 kDa tau91 subunit of transcription factor IIIC (TFIIIC) |
| YCR093W | -1 | -1.07 | cdc39 | nuclear protein that negatively regulates basal transcription |
| YBR049C | 1 | -1.07 | REB1 | RNA polymerase I enhancer binding protein |
| YPR129W | -1 | -1.08 | SCD6 | |
| YPR024W | -1 | -1.08 | YME1 | |
| YOL020W | -1 | -1.08 | TAT2 | Tryptophan permease, high affinity |
| YNL007C | -1 | -1.08 | sis1 | sit4 suppressor, dnaJ homolog |
| YKR092C | -1 | -1.08 | SRP40 | nucleolar protein that is immunologically and structurally related to rat Nopp140, a nonribosomal protein of the nucleolus and coiled bodies. |
| YKL139W | -1 | -1.08 | CTK1 | |
| YJR064W | -1 | -1.08 | CCT5 | subunit of chaperonin subunit epsilon |
| YJL168C | -1 | -1.08 | SET2 | transcription factor containing a SET domain |
| YIL154C | -1 | -1.08 | IMP2' | transcription factor |
| YHR129C | -1 | -1.08 | ARP1 | |
| YGR061C | -1 | -1.08 | ade6 | 5'-phosphoribosylformyl glycinamidine synthetase |
| YGL191W | -1 | -1.08 | COX13 | subunit VIa of cytochrome c oxidase, may specifically interact with ATP |
| YGL190C | -1 | -1.08 | cdc55 | Protein phosphatase 2A regulatory subunit B |
| YFR050C | -1 | -1.08 | PRE4 | proteasome subunit necessary for peptidyl glutamyl peptide hydrolyzing activity |
| YFL055W | -1 | -1.08 |