| gene | class | score | Locus Name | GeneProduct |
| YNL030W | 1 | 1.13 | HHF2 | Histone H4 (HHF1 and HHF2 code for identical proteins) |
| YBR009C | 1 | 1.13 | HHF1 | Histone H4 (HHF1 and HHF2 code for identical proteins) |
| YBR010W | 1 | 1.05 | HHT1 | Histone H3 (HHT1 and HHT2 code for identical proteins) |
| YNL031C | 1 | 1 | HHT2 | Histone H3 (HHT1 and HHT2 code for identical proteins) |
| YDR224C | 1 | 0.889 | HTB1 | Histone H2B (HTB1 and HTB2 code for nearly identical proteins) |
| YBL003C | 1 | 0.872 | HTA2 | Histone H2A (HTA1 and HTA2 code for nearly identical proteins) |
| YDR225W | 1 | 0.822 | HTA1 | Histone H2A (HTA1 and HTA2 code for nearly identical proteins) |
| YBL002W | 1 | 0.645 | HTB2 | Histone H2B (HTB1 and HTB2 code for nearly identical proteins) |
| YPL127C | 1 | 0.158 | HHO1 | histone H1 |
| YJR076C | -1 | -0.332 | cdc11 | Component of 10 nm filaments of mother-bud neck |
| YER032W | -1 | -0.342 | FIR1 | Putative participant in 3' mRNA processing |
| YNL032W | -1 | -0.494 | SIW14 | Tyrosine phosphatase |
| YPR106W | -1 | -0.515 | ISR1 | protein kinase |
| YBR243C | -1 | -0.522 | alg7 | UDP-N-acetyl-glucosamine-1-P transferase (GPT) |
| YDR113C | -1 | -0.523 | PDS1 | 42-kDa nuclear protein |
| YNL283C | -1 | -0.527 | WSC2 | Putative integral membrane protein containing novel cysteine motif. Similarity to SLG1 (WSC1), WSC3 and WSC4 |
| YLR045C | -1 | -0.61 | STU2 | |
| YML098W | -1 | -0.615 | TAF19 | TFIID subunit |
| YOR180C | -1 | -0.647 | EHD2 | Peroxisomal enoyl-CoA hydratase |
| YHR061C | -1 | -0.656 | GIC1 | |
| YDR086C | -1 | -0.683 | SSS1 | endoplasmic reticulum protein that is part of the Sec61 trimeric complex and the Ssh1 trimeric complex |
| YKR010C | -1 | -0.686 | TOF2 | |
| YBL001C | -1 | -0.707 | ECM15 | |
| YJR144W | -1 | -0.72 | MGM101 | |
| YNR028W | -1 | -0.745 | CPR8 | Cyclophilin |
| YDR381W | -1 | -0.746 | YRA1 | Nuclear RNA-binding RNA annealing protein |
| YGL145W | -1 | -0.747 | TIP20 | transport protein that interacts with Sec20p\; required for protein transport from the endoplasmic reticulum to the golgi apparatus |
| YGL200C | -1 | -0.774 | EMP24 | type I transmemebrane protein, component of COPII-coated, ER-derived transport vesicles |
| YPR120C | -1 | -0.78 | CLB5 | B-type cyclin |
| YPL163C | -1 | -0.788 | SVS1 | Serine and threonine rich protein. |
| YER001W | -1 | -0.792 | mnn1 | Alpha-1,3-mannosyltransferase |
| YGL210W | -1 | -0.793 | YPT32 | ras-like GTPase, highly homologous to YPT31 |
| YBR252W | -1 | -0.801 | DUT1 | dUTP pyrophosphatase (dUTPase) |
| YBR135W | -1 | -0.805 | cks1 | subunit of the Cdc28 protein kinase |
| YNL216W | -1 | -0.81 | rap1 | repressor activator protein |
| YHR086W | -1 | -0.814 | NAM8 | putative RNA binding protein, involved in meiosis-specific splicing of the REC107 transcripts in cooperation with the Mer1 protein |
| YGR108W | -1 | -0.816 | CLB1 | G(sub)2-specific B-type cyclin |
| YKL122C | -1 | -0.817 | SRP21 | component of signal recognition particle |
| YIR028W | -1 | -0.817 | dal4 | allantoin permease |
| YGL225W | -1 | -0.817 | GOG5 | |
| YER122C | -1 | -0.823 | GLO3 | Zinc-finger-containing protein with similarity to Gcs1p and Sps18p |
| YNL197C | -1 | -0.824 | WHI3 | Putative RNA binding protein |
| YKL048C | -1 | -0.826 | ELM1 | protein kinase |
| YGL097W | -1 | -0.829 | SRM1 | pheromone response pathway suppressor |
| YOR026W | -1 | -0.832 | BUB3 | |
| YPL128C | -1 | -0.853 | TBF1 | TTAGGG repeat binding factor |
| YIL123W | -1 | -0.858 | SIM1 | |
| YBR041W | -1 | -0.859 | FAT1 | Fatty acid transporter |
| YMR056C | -1 | -0.865 | AAC1 | mitochondrial ADP\/ATP translocator |
| YPR057W | -1 | -0.875 | BRR1 | Spliceosomal snRNP component |
| YNL066W | -1 | -0.882 | SUN4 | |
| YER170W | -1 | -0.892 | adk2 | Adenylate kinase (mitochondrial GTP:AMP phosphotransferase) |
| YIL050W | -1 | -0.895 | PCL7 | PHO85 cyclin |
| YJL173C | -1 | -0.897 | RFA3 | subunit 3 of replication factor-A |
| YKR034W | -1 | -0.899 | DAL80 | negative regulator of multiple nitrogen catabolic genes |
| YOR330C | -1 | -0.902 | mip1 | catalytic subunit of mitochondrial DNA polymerase |
| YMR270C | -1 | -0.903 | RRN9 | Upstream activation factor subunit |
| YPR104C | -1 | -0.908 | FHL1 | Protein with a domain similar to the fork head DNA-binding domain found in the developmental fork head protein of Drosophila melanogaster and in the HNF-3 family of hepatocyte mammalian transcription factors. |
| YOR106W | -1 | -0.911 | VAM3 | member of the syntaxin family of proteins\; predicted C-terminal TMD |
| YLL004W | -1 | -0.912 | ORC3 | Third subunit of the origin recognition complex |
| YML065W | -1 | -0.913 | ORC1 | 120-kDa (largest) subunit of origin recognition complex (ORC)\; shows homology to Cdc6p, Cdc18p, and Sir3p and to proteins from K. lactis, S. pombe, and humans |
| YBR049C | -1 | -0.917 | REB1 | RNA polymerase I enhancer binding protein |
| YFL045C | -1 | -0.921 | SEC53 | phosphomannomutase |
| YPL255W | -1 | -0.924 | BBP1 | |
| YML012W | -1 | -0.927 | ERV25 | vesicle coat component |
| YPL129W | -1 | -0.931 | ANC1 | transcription initiation factor TFIIF small subunit |
| YOR377W | -1 | -0.931 | ATF1 | Alcohol acetyltransferase |
| YER148W | -1 | -0.933 | spt15 | TATA-binding protein (tfIId) |
| YPL227C | -1 | -0.935 | ALG5 | UDP-glucose:dolichyl-phosphate glucosyltransferase |
| YLR191W | -1 | -0.94 | PEX13 | Peroxisomal membrane protein that contains Src homology 3 (SH3) domain |
| YGL212W | -1 | -0.942 | VAM7 | hydrophilic protein, heptad repeat motif |
| YDR252W | -1 | -0.946 | BTT1 | |
| YOL123W | -1 | -0.947 | HRP1 | |
| YPR062W | -1 | -0.948 | FCY1 | cytosine deaminase |
| YJL013C | -1 | -0.951 | MAD3 | spindle checkpoint complex subunit |
| YBL069W | -1 | -0.956 | AST1 | |
| YJL002C | -1 | -0.957 | OST1 | 64-kDa, alpha subunit of oligosaccharyltransferase complex\; homologous to mammalian ribophorin I |
| YNL225C | -1 | -0.958 | CNM67 | |
| YOL005C | -1 | -0.959 | RPB11 | RNA polymerase II subunit, homologous to S. pombe Rpb11p subunit |
| YCL007C | -1 | -0.962 | CWH36 | |
| YOR323C | -1 | -0.968 | pro2 | gamma-glutamyl phosphate reductase |
| YPR119W | -1 | -0.969 | CLB2 | G(sub)2-specific B-type cyclin |
| YMR200W | -1 | -0.974 | ROT1 | putative membrane protein |
| YDL064W | -1 | -0.978 | UBC9 | ubiquitin-conjugating enzyme |
| YOR045W | -1 | -0.981 | TOM6 | outer mitochondrial membrane protein, component of the mitochondiral protein translocation complex, associates with Isp42p |
| YEL042W | -1 | -0.982 | GDA1 | Guanosine diphosphatase of Golgi membrane |
| YDR356W | -1 | -0.983 | NUF1 | component of the spindle pole body that interacts with Spc42p, calmodulin, and a 35 kDa protein |
| YOR085W | -1 | -0.984 | OST3 | 34-kDa, gamma subunit of oligosaccharyl transferase glycoprotein complex |
| YGR020C | -1 | -0.988 | vma7 | |
| YGR193C | -1 | -0.991 | PDX1 | Protein X component of mitochondrial pyruvate dehydrogenase complex |
| YDR448W | -1 | -0.992 | ADA2 | transcription factor, member of ADA and SAGA, two transcriptional adaptor\/HAT (histone acetyltransferase)complexes |
| YOL007C | -1 | -0.993 | CSI2 | Appears to be a structural component of the chitin synthase 3 complex |
| YHR050W | -1 | -0.993 | SMF2 | localized to mitochondrial membrane |
| YFL005W | -1 | -0.995 | sec4 | Ras-like small GTP-binding protein |
| YOR099W | -1 | -0.998 | KTR1 | type 2 membrane protein\; probable secretory protein |
| YER094C | -1 | -0.998 | PUP3 | 20S proteasome subunit beta3_sc |
| YDR263C | -1 | -1 | DIN7 | |
| YPL232W | -1 | -1.01 | SSO1 | post-Golgi t-SNARE |
| YOR074C | -1 | -1.01 | cdc21 | Thymidylate synthase |
| YMR001C | -1 | -1.01 | cdc5 | protein kinase which functions at the G(sub)2\/M boundary |
| YLR220W | -1 | -1.01 | CCC1 | Possible transmembrane Ca2+ transporter |
| YGR202C | -1 | -1.01 | PCT1 | phosphorylcholine transferase\; or cholinephosphate cytidylyltransferase |
| YDR092W | -1 | -1.01 | UBC13 | ubiquitin-conjugating enzyme |
| YPL253C | -1 | -1.02 | VIK1 | Cik1p homolog |
| YKL112W | -1 | -1.02 | ABF1 | transcriptional activator and ARS1 binding protein |
| YJR143C | -1 | -1.02 | PMT4 | dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase |
| YJL176C | -1 | -1.02 | SWI3 | transcription factor |
| YER100W | -1 | -1.02 | ubc6 | ubiquitin-conjugating enzyme |
| YER042W | -1 | -1.02 | MXR1 | peptide methionine sulfoxide reductase |
| YDR142C | -1 | -1.02 | PEX7 | Member of beta-transducin-related (WD-40) protein family |
| YOR373W | -1 | -1.03 | NUD1 | nuclesome assembly protein I |
| YLR299W | -1 | -1.03 | ECM38 | gamma-glutamyltransferase homolog |
| YKR085C | -1 | -1.03 | MRPL20 | 22.3 kDa mitochondrial ribosomal large subunit protein YmL20\; homologous to L17 of E. coli |
| YKL011C | -1 | -1.03 | cce1 | cruciform cutting endonuclease |
| YBR294W | -1 | -1.03 | SUL1 | |
| YBL099W | -1 | -1.03 | ATP1 | mitochondrial F1F0-ATPase alpha subunit |
| YOR017W | -1 | -1.04 | pet127 | Mitochondrial membrane protein |
| YOL103W | -1 | -1.04 | ITR2 | myo-inositol transporter |
| YDR297W | -1 | -1.04 | SUR2 | Syringomycin response protein 2 |
| YBL038W | -1 | -1.04 | MRPL16 | Mitochondrial ribosomal protein MRPL16 |
| YJL196C | -1 | -1.05 | ELO1 | |
| YGL237C | -1 | -1.05 | hap2 | transcriptional activator protein of CYC1 |
| YBR205W | -1 | -1.05 | KTR3 | Putative alpha-1,2-mannosyltransferase |
| YOL109W | -1 | -1.06 | ZEO1 | |
| YLR188W | -1 | -1.06 | MDL1 | |
| YDR510W | -1 | -1.06 | SMT3 | |
| YDL192W | -1 | -1.06 | arf1 | ADP-ribosylation factor |
| YBR129C | -1 | -1.06 | OPY1 | |
| YBR122C | -1 | -1.06 | MRPL36 | Mitochondrial ribosomal protein MRPL36 (YmL36) |
| YPR034W | -1 | -1.07 | ARP7 | actin related protein, subunit of the chromatin remodeling Snf\/Swi complex |
| YNL251C | -1 | -1.07 | NRD1 | |
| YNL169C | -1 | -1.07 | PSD1 | Phosphatidylserine Decarboxylase 1 |
| YDL184C | -1 | -1.08 | RPL41A | Ribosomal protein L41A (YL41) (L47A) |
| YDL065C | -1 | -1.08 | PEX19 | 40 kDa farnesylated protein associated with peroxisomes |
| YBR256C | -1 | -1.08 | rib5 | Riboflavin synthase alpha-chain |
| YAL023C | -1 | -1.08 | PMT2 | dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase |
| YOL108C | -1 | -1.09 | INO4 | basic helix-loop-helix (bHLH) protein |
| YKR001C | -1 | -1.09 | VPS1 | putative GTP-binding protein\; similar to mammalian Mx proteins |
| YER014W | -1 | -1.09 | HEM14 | protoporphyrinogen oxidase |
| YDR177W | -1 | -1.09 | ubc1 | ubiquitin-conjugating enzyme |
| YDL084W | -1 | -1.09 | SUB2 | RNA helicase |
| YCR003W | -1 | -1.09 | MRPL32 | Mitochondrial ribosomal protein MRPL32 (YmL32) |
| YBR039W | -1 | -1.09 | ATP3 | gamma subunit of mitochondrial ATP synthase |
| YOR204W | -1 | -1.1 | DED1 | |
| YEL003W | -1 | -1.1 | GIM4 | Putative homolog of subunit 2 of bovine prefoldin, a chaperone comprised of six subunits |
| YBR257W | -1 | -1.1 | POP4 | |
| YOR089C | -1 | -1.11 | vps21 | small GTP-binding protein\; geranylgeranylated\; geranylgeranylation required for membrane association\; also involved in endocytosis post vesicle internalization |
| YOL149W | -1 | -1.11 | DCP1 | |
| YNL118C | -1 | -1.11 | PSU1 | |
| YGL012W | -1 | -1.11 | ERG4 | Sterol C-24 reductase |
| YDR390C | -1 | -1.11 | UBA2 | |
| YDL137W | -1 | -1.11 | arf2 | ADP-ribosylation factor 2 |
| YCL025C | -1 | -1.11 | AGP1 | Amino acid permease |
| YPR029C | -1 | -1.12 | APL4 | Gamma-adaptin, large subunit of the clathrin-associated protein (AP) complex |
| YOR033C | -1 | -1.12 | DHS1 | exonuclease |
| YKL067W | -1 | -1.12 | YNK1 | Nucleoside diphosphate kinase |
| YJR017C | -1 | -1.12 | ess1 | Peptidyl-prolyl cis\/trans isomerase (PPIase) |
| YHR055C | -1 | -1.12 | CUP1 | copper-binding metallothionein |
| YGR252W | -1 | -1.12 | GCN5 | histone acetyltransferase |
| YER011W | -1 | -1.12 | TIR1 | |
| YDL101C | -1 | -1.12 | dun1 | protein kinase |
| YBR118W | -1 | -1.12 | TEF2 | translational elongation factor EF-1 alpha |
| YOR188W | -1 | -1.13 | msb1 | |
| YMR199W | -1 | -1.13 | CLN1 | G(sub)1 cyclin |
| YML042W | -1 | -1.13 | CAT2 | Carnitine O-acetyltransferase, peroxisomal and mitochondrial |
| YJR048W | -1 | -1.13 | cyc1 | iso-1-cytochrome c |
| YJL201W | -1 | -1.13 | ECM25 | |
| YBR087W | -1 | -1.13 | RFC5 | Subunit 5 of Replication Factor C\; homologous to human RFC 38 kDa subunit |
| YBR037C | -1 | -1.13 | SCO1 | inner mitochondrial membrane protein |
| YPR166C | -1 | -1.14 | mrp2 | 14 kDa mitochondrial ribosomal protein\; homologous to E. coli S14 protein |
| YOR332W | -1 | -1.14 | vma4 | 27-kDa subunit of the vacuolar ATPase\; E subunit of V1 sector |
| YOR187W | -1 | -1.14 | ||
| YLR372W | -1 | -1.14 | SUR4 | |
| YKL032C | -1 | -1.14 | IXR1 | intrastrand crosslink recognition protein |
| YIL045W | -1 | -1.14 | PIG2 | Protein with 30\% identity to protein corresponding to YER054 |
| YHL003C | -1 | -1.14 | LAG1 | |
| YFL038C | -1 | -1.14 | YPT1 | Ras-like GTP-binding protein\; most similar to mammalian Rab1A protein |
| YEL056W | -1 | -1.14 | HAT2 | subunit of a cytoplasmic histone acetyltransferase |
| YDL155W | -1 | -1.14 | CLB3 | G(sub)2-specific B-type cyclin |
| YNL029C | -1 | -1.15 | KTR5 | Putative mannosyltransferase |
| YMR072W | -1 | -1.15 | ABF2 | HMG-1 homolog, mitochondrial |
| YJR121W | -1 | -1.15 | ATP2 | F(1)F(0)-ATPase complex beta subunit, mitochondrial |
| YIR017C | -1 | -1.15 | MET28 | transcriptional activator in the Cbf1p-Met4p-Met28p complex |
| YIL070C | -1 | -1.15 | ||
| YOR176W | -1 | -1.16 | HEM15 | ferrochelatase (protoheme ferrolyase) |
| YNL270C | -1 | -1.16 | ALP1 | Basic amino acid permease |
| YJL006C | -1 | -1.16 | CTK2 | cyclin-like protein |
| YIL021W | -1 | -1.16 | RPB3 | 45 kDa subunit of RNA polymerase II |
| YHR106W | -1 | -1.16 | TRR2 | Thioredoxin reductase |
| YDR404C | -1 | -1.16 | rpb7 | dissociable subunit of RNA polymerase II |
| YBR130C | -1 | -1.16 | SHE3 | |
| YBR078W | -1 | -1.16 | ECM33 | |
| YBR076W | -1 | -1.16 | ECM8 | |
| YPR017C | -1 | -1.17 | DSS4 | GDP dissociation factor for Sec4p |
| YOR278W | -1 | -1.17 | HEM4 | uroporphyrinogen III synthase |
| YNL151C | -1 | -1.17 | rpc31 | 31-kDa subunit of RNA polymerase III (C)\; HMG1 like protein |
| YLR393W | -1 | -1.17 | ATP10 | |
| YLR043C | -1 | -1.17 | trx1 | thioredoxin |
| YKL058W | -1 | -1.17 | TOA2 | Transcription factor IIA, small chain |
| YHL001W | -1 | -1.17 | RPL14B | Ribosomal protein L14B |
| YGL143C | -1 | -1.17 | MRF1 | Mitochondrial polypeptide chain release factor |
| YER016W | -1 | -1.17 | BIM1 | |
| YCR034W | -1 | -1.17 | fen1 | Probable subunit of 1,3-beta-glucan synthase\; homolog of ELO1 |
| YBL091C | -1 | -1.17 | MAP2 | methionine aminopeptidase 2 |
| YPL256C | -1 | -1.18 | CLN2 | G(sub)1 cyclin |
| YNR052C | -1 | -1.18 | POP2 | Putative transcription factor |
| YLR292C | -1 | -1.18 | SEC72 | protein involved in membrane protein insertion into the ER |
| YLL022C | -1 | -1.18 | HIF1 | |
| YKL180W | -1 | -1.18 | RPL17A | Ribosomal protein L17A (L20A) (YL17) |
| YHR026W | -1 | -1.18 | ppa1 | proteolipid protein of the proton ATPase |
| YGR005C | -1 | -1.18 | TFG2 | transcription initiation factor TFIIF middle subunit |
| YGL070C | -1 | -1.18 | rpb9 | RNA polymerase II subunit |
| YFR033C | -1 | -1.18 | QCR6 | ubiquinol-cytochrome c oxidoreductase subunit 6 (17 kDa) |
| YER161C | -1 | -1.18 | spt2 | non-specific DNA binding protein (sin1) |
| YER159C | -1 | -1.18 | BUR6 | Transcriptional regulator which functions in modulating the activity of the general transcription machinery in vivo |
| YEL031W | -1 | -1.18 | SPF1 | P-type ATPase |
| YDR529C | -1 | -1.18 | QCR7 | ubiquinol-cytochrome c oxidoreductase subunit 7 (14 kDa) |
| YDR331W | -1 | -1.18 | GPI8 | |
| YBR142W | -1 | -1.18 | mak5 | |
| YBR127C | -1 | -1.18 | VMA2 | |
| YBR106W | -1 | -1.18 | PHO88 | |
| YPR080W | -1 | -1.19 | tef1 | translational elongation factor EF-1 alpha |
| YOR244W | -1 | -1.19 | ESA1 | Acetyltransferase in the SAS gene family |
| YOR075W | -1 | -1.19 | UFE1 | endoplasmic reticulum t-SNARE, coprecipitates with Sec20p, Tip1p. and Sec22p |
| YOR039W | -1 | -1.19 | CKB2 | Casein kinase II, beta' subunit |
| YOL069W | -1 | -1.19 | NUF2 | 53-kDa coiled-coil protein |
| YNL121C | -1 | -1.19 | TOM70 | 70 kDa mitochondrial specialized import receptor of the outer membrane |
| YGL172W | -1 | -1.19 | NUP49 | nuclear pore complex protein with GLFG repetitive sequence motif |
| YER112W | -1 | -1.19 | LSM4 | U6 snRNA associated protein |
| YDR518W | -1 | -1.19 | EUG1 | Protein disulfide isomerase homolog |
| YOR237W | -1 | -1.2 | HES1 | homology to human oxysterol binding protein |
| YOL143C | -1 | -1.2 | RIB4 | 6,7-dimethyl-8-ribityllumazine synthase (DMRL synthase) |
| YMR274C | -1 | -1.2 | RCE1 | protease, acts on Ras and a-factor C-termini |
| YLR083C | -1 | -1.2 | EMP70 | |
| YJL140W | -1 | -1.2 | RPB4 | fourth-largest subunit of RNA polymerase II |
| YIR004W | -1 | -1.2 | DJP1 | |
| YDR450W | -1 | -1.2 | RPS18A | Ribosomal protein S18A |
| YDR298C | -1 | -1.2 | ATP5 | ATP synthase subunit 5\; oligomycin sensitivity-conferring protein |
| YDR002W | -1 | -1.2 | YRB1 | |
| YBL056W | -1 | -1.2 | PTC3 | protein phosphatase type 2C |
| YPL218W | -1 | -1.21 | SAR1 | GTP-binding protein of the ARF family |
| YPL072W | -1 | -1.21 | UBP16 | putative deubiquitinating enzyme |
| YOL012C | 1 | -1.21 | HTA3 | An evolutionarily conserved member of the histone H2A F\/Z family of histone variants |
| YNL244C | -1 | -1.21 | sui1 | translation initiation factor 3 (eIF3) |
| YML061C | -1 | -1.21 | pif1 | 5' to 3' DNA helicase |
| YLR375W | -1 | -1.21 | STP3 | |
| YKL049C | 1 | -1.21 | CSE4 | high similarity to histone H3 and to human centromere protein CENP-A |
| YIL068C | -1 | -1.21 | SEC6 | 88 kD component of the Exocyst complex, which contains the gene products encoded by SEC3, SEC5, SEC6, SEC8, SEC10, SEC15 and EXO70 |
| YHR178W | -1 | -1.21 | STB5 | |
| YER149C | -1 | -1.21 | PEA2 | Protein with coiled-coil domain |
| YBR268W | -1 | -1.21 | MRPL37 | Probable mitochondrial protein L37 |
| YAL054C | -1 | -1.21 | acs1 | inducible acetyl-coenzyme A synthetase |
| YPL269W | -1 | -1.22 | KAR9 | |
| YPL122C | -1 | -1.22 | TFB2 | TFIIH subunit Tfb2\; has homology to CAK and human IIH subunits |
| YOR355W | -1 | -1.22 | GDS1 | |
| YOR196C | -1 | -1.22 | LIP5 | lipoic acid synthase |
| YNL219C | -1 | -1.22 | ALG9 | mannosyltransferase |
| YNL126W | -1 | -1.22 | SPC98 | spindle pole body component, associates in a complex with Spc97p and Tub4p perhaps as part of the microtubule attachment site of the SBP |
| YMR146C | -1 | -1.22 | TIF34 | p39 subunit of translation initiation factor eIF3 |
| YML092C | -1 | -1.22 | PRE8 | proteasome component Y7 |
| YKL042W | -1 | -1.22 | SPC42 | component of the spindle pole body |
| YHR175W | -1 | -1.22 | CTR2 | |
| YGL003C | -1 | -1.22 | CDH1 | protein required for Clb2 and Ase1 degradation |
| YDL202W | -1 | -1.22 | MRPL11 | Mitochondrial ribosomal protein MRPL11 (YmL11) |
| YBR133C | -1 | -1.22 | HSL7 | |
| YPR155C | -1 | -1.23 | NCA2 | |
| YPR111W | -1 | -1.23 | dbf20 | kinase required for late nuclear division |
| YNL312W | -1 | -1.23 | RFA2 | subunit 2 of replication factor RF-A\; 29\% identical to the human p34 subunit of RF-A |
| YNL257C | -1 | -1.23 | SIP3 | Putative transcriptional activator |
| YNL072W | -1 | -1.23 | RNH35 | RNase H(35), a 35 kDa ribonuclease H |
| YNL052W | -1 | -1.23 | COX5A | Cytochrome-c oxidase chain Va |
| YML055W | -1 | -1.23 | SPC2 | subunit of signal peptidase complex, homologous to mammalian protein SPC25 |
| YLR300W | -1 | -1.23 | exg1 | Exo-1,3-beta-glucanase |
| YLL041C | -1 | -1.23 | SDH2 | Succinate dehydrogenase (ubiquinone) iron-sulfur protein subunit |
| YKR093W | -1 | -1.23 | PTR2 | Peptide transporter |
| YIR029W | -1 | -1.23 | dal2 | allantoicase |
| YDR300C | -1 | -1.23 | pro1 | gamma-glutamyl kinase |
| YDR146C | -1 | -1.23 | swi5 | transcriptional activator |
| YCR002C | -1 | -1.23 | cdc10 | conserved potential GTP-ginding protein |
| YBL021C | -1 | -1.23 | HAP3 | transcriptional activator protein of CYC1 |
| YPR058W | -1 | -1.24 | ymc1 | putative mitochondrial carrier protein |
| YPL078C | -1 | -1.24 | ATP4 | F(1)F(0)-ATPase complex delta subunit, mitochondrial |
| YOR142W | -1 | -1.24 | LSC1 | |
| YNL005C | -1 | -1.24 | MRP7 | Mitochondrial ribosomal protein MRP7 (YmL2) (E. coli L27) |
| YMR272C | -1 | -1.24 | SCS7 | desaturase\/hydroxylase enzyme |
| YML069W | -1 | -1.24 | POB3 | binds DNA polymerase delta |
| YLR295C | -1 | -1.24 | ATP14 | ATP synthase subunit h |
| YLR210W | -1 | -1.24 | CLB4 | G(sub)2-specific B-type cyclin |
| YLR102C | -1 | -1.24 | APC9 | subunit of the anaphase promoting complex (APC) |
| YLR093C | -1 | -1.24 | NYV1 | vacuolar v-SNARE |
| YKL085W | -1 | -1.24 | MDH1 | mitochondrial malate dehydrogenase |
| YJR002W | -1 | -1.24 | MPP10 | U3 snoRNP protein |
| YJL210W | -1 | -1.24 | PEX2 | CH3HC4 zinc-binding integral peroxisomal membrane protein |
| YIL159W | -1 | -1.24 | BNR1 | |
| YGR044C | -1 | -1.24 | rme1 | zinc finger protein\; negative regulator of meiosis\; directly repressed by a1-a2 regulator |
| YGL112C | -1 | -1.24 | TAF60 | TATA-binding protein-associated-factor |
| YFR036W | -1 | -1.24 | cdc26 | |
| YFR028C | -1 | -1.24 | cdc14 | soluble tyrosine-specific protein phosphatase |
| YDR148C | -1 | -1.24 | KGD2 | dihydrolipoyl transsuccinylase component of alpha-ketoglutarate dehydrogenase complex in mitochondria |
| YCR084C | -1 | -1.24 | tup1 | glucose repression regulatory protein, exhibits similarity to beta subunits of G proteins |
| YBL045C | -1 | -1.24 | COR1 | 44 kDa core protein of yeast coenzyme QH2 cytochrome c reductase |
| YPR088C | -1 | -1.25 | SRP54 | Signal recognition particle subunit |
| YPL024W | -1 | -1.25 | nce4 | |
| YNL016W | -1 | -1.25 | PUB1 | poly(A)+ RNA-binding protein |
| YMR127C | -1 | -1.25 | SAS2 | zinc-finger protein |
| YLR314C | -1 | -1.25 | cdc3 | Component of 10 nm filaments of mother-bud neck |
| YLR182W | -1 | -1.25 | SWI6 | transcription factor |
| YLR029C | -1 | -1.25 | RPL15A | Ribosomal protein L15A (YL10) (rp15R) (L13A) |
| YKL138C | -1 | -1.25 | MRPL31 | 15.5 kDa mitochondrial ribosomal protein YmL31 |
| YKL016C | -1 | -1.25 | ATP7 | ATP synthase d subunit |
| YJR093C | -1 | -1.25 | FIP1 | |
| YIL076W | -1 | -1.25 | SEC28 | epsilon-COP coatomer subunit Sec28p |
| YHL033C | -1 | -1.25 | RPL8A | Ribosomal protein L8A (rp6) (YL5) (L4A) |
| YGR229C | -1 | -1.25 | SMI1 | 57 kDa nuclear protein |
| YER141W | -1 | -1.25 | COX15 | cytochrome oxidase assembly factor |
| YBR221C | -1 | -1.25 | pdb1 | beta subunit of pyruvate dehydrogenase (E1 beta) |
| YBR173C | -1 | -1.25 | UMP1 | 20S proteasome maturation factor |
| YBR070C | -1 | -1.25 | ||
| YBL087C | -1 | -1.25 | RPL23A | Ribosomal protein L23A (L17aA) (YL32) |
| YAL067C | -1 | -1.25 | SEO1 | putative permease |
| YPR183W | -1 | -1.26 | DPM1 | dolichol phosphate mannose synthase |
| YPR101W | -1 | -1.26 | SNT309 | splicing factor |
| YPL228W | -1 | -1.26 | CET1 | mRNA capping enzyme beta subunit (80 kDa), RNA 5'-triphosphatase |
| YOR221C | -1 | -1.26 | MCT1 | malonyl CoA |
| YOR171C | -1 | -1.26 | LCB4 | sphingoid long chain base (LCB) kinase |
| YKL101W | -1 | -1.26 | HSL1 | Putative protein kinase homologous to S. pombe cdr1\/nim1 |
| YJR031C | -1 | -1.26 | GEA1 | GDP\/GTP exchange factor |
| YJL008C | -1 | -1.26 | CCT8 | Component of Chaperonin Containing T-complex subunit eight |
| YGL254W | -1 | -1.26 | FZF1 | putative transcription factor, has five zinc fingers |
| YFL037W | -1 | -1.26 | tub2 | beta-tubulin |
| YFL018C | -1 | -1.26 | LPD1 | dihydrolipoamide dehydrogenase precursor (mature protein is the E3 component of alpha-ketoacid dehydrogenase complexes) |
| YEL036C | -1 | -1.26 | anp1 | |
| YDR538W | -1 | -1.26 | PAD1 | Phenylacrylic acid decarboxylase |
| YDR253C | -1 | -1.26 | MET32 | zinc finger DNA binding factor, transcriptional regulator of sulfur amino acid metabolism, highly homologous to Met31p |
| YDR227W | -1 | -1.26 | sir4 | regulator of silent mating loci |
| YDR118W | -1 | -1.26 | APC4 | subunit of the anaphase promoting complex (APC) |
| YCR035C | -1 | -1.26 | RRP43 | Component of the exosome 3->5 exoribonuclease complex with Rrp4p, Rrp41p, Rrp42p and Dis3p (Rrp44p). |
| YBR253W | -1 | -1.26 | SRB6 | transcription factor, part of Srb\/Mediator complex |
| YBR195C | -1 | -1.26 | msi1 | p50 subunit of the yeast Chromatin Assembly Factor-I (CAF-I) negative regulator of ras-mediated cAMP induction\; homologous to beta subunit of GTP-binding proteins |
| YBL079W | -1 | -1.26 | NUP170 | Nucleoporin highly similar to Nup157p and to mammalian Nup155p (nup170 mutant can be complemented with NUP155) |
| YOR368W | -1 | -1.27 | rad17 | encodes a putative 3'->5'exonuclease |
| YOR327C | -1 | -1.27 | SNC2 | vesicle-associated membrane protein (synaptobrevin) homolog |
| YNR034W | -1 | -1.27 | SOL1 | shows similarity to glucose-6-phosphate dehydrogenase non-catalytic domains\; homologous to Sol2p and Sol3p |
| YNL287W | -1 | -1.27 | SEC21 | non-clathrin coat protein involved in transport between ER and Golgi |
| YLR234W | -1 | -1.27 | top3 | DNA Topoisomerase III |
| YLR203C | -1 | -1.27 | mss51 | |
| YIL125W | -1 | -1.27 | kgd1 | alpha-ketoglutarate dehydrogenase |
| YHR172W | -1 | -1.27 | SPC97 | spindle pole body component, associates in a complex with Spc98p and Tub4p perhaps as part of the microtubule attachment site of the SBP |
| YGR244C | -1 | -1.27 | LSC2 | |
| YFR034C | -1 | -1.27 | pho4 | myc-type helix-loop-helix transcription factor |
| YDR261C | -1 | -1.27 | exg2 | Exo-1,3-b-glucanase |
| YDR182W | -1 | -1.27 | CDC1 | |
| YBR222C | -1 | -1.27 | FAT2 | |
| YAL033W | -1 | -1.27 | POP5 | An integral subunit of RNase P and apparent subunit of RNase MRP |
| YOL068C | -1 | -1.28 | HST1 | |
| YNL137C | -1 | -1.28 | nam9 | putative mitochondrial S4 ribosomal protein |
| YNL103W | -1 | -1.28 | met4 | member of the leucine zipper family of transcriptional activators |
| YML120C | -1 | -1.28 | NDI1 | mitochondrial NADH ubiquinone 6 oxidoreductase |
| YLR420W | -1 | -1.28 | ura4 | dihydrooratase |
| YLR288C | -1 | -1.28 | MEC3 | |
| YLR244C | -1 | -1.28 | MAP1 | methionine aminopeptidase |
| YLR170C | -1 | -1.28 | APS1 | clathrin-associated protein complex, small subunit |
| YJR152W | -1 | -1.28 | dal5 | allantoate permease |
| YJL180C | -1 | -1.28 | ATP12 | |
| YJL074C | -1 | -1.28 | SMC3 | |
| YIL094C | -1 | -1.28 | LYS12 | Homo-isocitrate dehydrogenase |
| YHR117W | -1 | -1.28 | TOM71 | 71-kDa component of the protein translocase of the outer membrane of mitochondria |
| YHL028W | -1 | -1.28 | WSC4 | Putative integral membrane protein containing novel cysteine motif. Similarity to SLG1 (WSC1), WSC2 and WSC3 |
| YGR231C | -1 | -1.28 | PHB2 | mitochondrial protein, prohibitin homolog\; homolog of mammalian BAP37 and S. cerevisiae Phb1p |
| YGR167W | -1 | -1.28 | CLC1 | Clathrin light chain |
| YGR009C | -1 | -1.28 | SEC9 | Putative t-SNARE of the plasma membrane |
| YGL253W | -1 | -1.28 | hxk2 | Hexokinase II (PII) (also called Hexokinase B) |
| YGL130W | -1 | -1.28 | CEG1 | mRNA guanylyltransferase (mRNA capping enzyme), alpha subunit |
| YEL002C | -1 | -1.28 | WBP1 | oligosaccharyl transferase glycoprotein complex, beta subunit |
| YAR007C | -1 | -1.28 | RFA1 | 69 kDa subunit of the heterotrimeric RPA (RF-A) single-stranded DNA binding protein, binds URS1 and CAR1 |
| YPR181C | -1 | -1.29 | SEC23 | cytoplasmic GTPase-activating protein |
| YPL111W | -1 | -1.29 | car1 | arginase |
| YNL153C | -1 | -1.29 | GIM3 | Putative homolog of subunit 4 of bovine prefoldin, a chaperone comprised of six subunits |
| YNL073W | -1 | -1.29 | MSK1 | mitochondrial lysine-tRNA synthetase |
| YNL037C | -1 | -1.29 | IDH1 | alpha-4-beta-4 subunit of mitochondrial isocitrate dehydrogenase 1 |
| YMR083W | -1 | -1.29 | adh3 | alcohol dehydrogenase isoenzyme III |
| YLR174W | -1 | -1.29 | IDP2 | Cytosolic form of NADP-dependent isocitrate dehydrogenase |
| YLR167W | -1 | -1.29 | RPS31 | Ribosomal protein S31 (S37) (YS24) |
| YLR160C | -1 | -1.29 | ASP3 | nitrogen catabolite-regulated cell-wall L-asparaginase II |
| YKR006C | -1 | -1.29 | MRPL13 | mitochondrial ribosomal protein YmL13 |
| YJR137C | -1 | -1.29 | ECM17 | Putative sulfite reductase |
| YJL187C | -1 | -1.29 | SWE1 | protein kinase homolog |
| YJL134W | -1 | -1.29 | LCB3 | putative plasma membrane transporter capable of transporting sphingoid long chain bases into cells |
| YJL099W | -1 | -1.29 | chs6 | |
| YJL031C | -1 | -1.29 | BET4 | Geranylgeranyltransferase Type II alpha subunit (PGGTase-II, alpha subunit) |
| YIL118W | -1 | -1.29 | RHO3 | ras homolog--GTP binding protein |
| YIL062C | -1 | -1.29 | ARC15 | |
| YGR276C | -1 | -1.29 | RNH70 | ribonuclease H |
| YGL191W | -1 | -1.29 | COX13 | subunit VIa of cytochrome c oxidase, may specifically interact with ATP |
| YER123W | -1 | -1.29 | YCK3 | plasma membrane-bound casein kinase I homolog |
| YER027C | -1 | -1.29 | GAL83 | |