| gene | class | score | Locus Name | GeneProduct |
| YFR050C | 1 | 1.69 | PRE4 | proteasome subunit necessary for peptidyl glutamyl peptide hydrolyzing activity |
| YGL048C | 1 | 1.67 | RPT6 | ATPase |
| YOR259C | 1 | 1.58 | RPT4 | ATPase\; component of the 26S proteasome cap subunit |
| YDR394W | 1 | 1.52 | RPT3 | |
| YPR103W | 1 | 1.4 | PRE2 | proteasome subunit |
| YDR427W | 1 | 1.32 | RPN9 | Subunit of the regulatory particle of the proteasome |
| YJL001W | 1 | 1.15 | PRE3 | Subunit of 20S proteasome |
| YGR135W | 1 | 1.09 | PRE9 | proteasome component Y13 |
| YKL145W | 1 | 1.04 | RPT1 | putative ATPase, 26S protease subunit component |
| YER021W | 1 | 1.02 | RPN3 | component of the regulatory module of the 26S proteasome, homologous to human p58 subunit |
| YDL097C | 1 | 1 | RPN6 | Subunit of the regulatory particle of the proteasome |
| YFR004W | 1 | 0.968 | RPN11 | Similar to S. pombe PAD1 gene product |
| YGR253C | 1 | 0.912 | PUP2 | Proteasome subunit |
| YGL011C | 1 | 0.9 | SCL1 | Proteasome subunit YC7alpha\/Y8 (protease yscE subunit 7) |
| YGR048W | -1 | 0.801 | UFD1 | |
| YPR108W | 1 | 0.773 | RPN7 | Subunit of the regulatory particle of the proteasome |
| YER012W | 1 | 0.761 | pre1 | 22.6 kDa proteasome subunit |
| YOR157C | 1 | 0.657 | pup1 | putative proteasome subunit |
| YMR314W | 1 | 0.607 | PRE5 | alpha-type of subunit of 20S proteasome |
| YIL075C | 1 | 0.471 | RPN2 | RPN2p is a component of the 26S proteosome |
| YBR173C | 1 | 0.47 | UMP1 | 20S proteasome maturation factor |
| YOR362C | 1 | 0.413 | PRE10 | proteasome component YC1 (protease yscE subunit 1) |
| YER094C | 1 | 0.388 | PUP3 | 20S proteasome subunit beta3_sc |
| YOR117W | 1 | 0.349 | RPT5 | |
| YDR510W | -1 | 0.349 | SMT3 | |
| YHR200W | 1 | 0.316 | RPN10 | homolog of the mammalian S5a protein, component of 26S proteasome |
| YML092C | 1 | 0.234 | PRE8 | proteasome component Y7 |
| YDR054C | -1 | 0.23 | cdc34 | ubiquitin-conjugating enzyme, E2 |
| YFR052W | 1 | 0.211 | RPN12 | cytoplasmic 32 - 34 kDa protein |
| YHL034C | -1 | 0.201 | sbp1 | |
| YLR025W | -1 | 0.0876 | snf7 | |
| YML007W | -1 | 0.0606 | YAP1 | jun-like transcription factor |
| YOL038W | 1 | 0.0303 | PRE6 | alpha-type of subunit of 20S proteasome |
| YDL007W | 1 | -0.0343 | RPT2 | |
| YMR022W | -1 | -0.11 | QRI8 | ubiquitin conjugating enzyme |
| YCL052C | -1 | -0.201 | PBN1 | Protease B, nonderepressible form |
| YJL008C | -1 | -0.22 | CCT8 | Component of Chaperonin Containing T-complex subunit eight |
| YHL030W | -1 | -0.275 | ECM29 | |
| YBR119W | -1 | -0.281 | MUD1 | U1 snRNP A protein |
| YJL053W | -1 | -0.284 | PEP8 | Vacuolar protein similar to mouse gene H |
| YMR280C | -1 | -0.285 | CAT8 | Zinc-cluster protein involved in activating gluconeogenic genes\; related to Gal4p |
| YDL147W | 1 | -0.303 | RPN5 | Subunit of the regulatory particle of the proteasome |
| YOL049W | -1 | -0.337 | GSH2 | Glutathione Synthetase |
| YDL132W | -1 | -0.353 | cdc53 | |
| YGR231C | -1 | -0.376 | PHB2 | mitochondrial protein, prohibitin homolog\; homolog of mammalian BAP37 and S. cerevisiae Phb1p |
| YBL041W | 1 | -0.38 | PRE7 | proteasome subunit |
| YLR450W | -1 | -0.392 | hmg2 | 3-hydroxy-3-methylglutaryl-coenzyme A (HMG-CoA) reductase isozyme |
| YCR036W | -1 | -0.422 | RBK1 | ribokinase |
| YKL117W | -1 | -0.438 | SBA1 | Hsp90 (Ninety) Associated Co-chaperone |
| YKR066C | -1 | -0.449 | CCP1 | Cytochrome-c peroxidase |
| YBR050C | -1 | -0.452 | REG2 | |
| YGL073W | -1 | -0.465 | HSF1 | heat shock transcription factor |
| YJL031C | -1 | -0.467 | BET4 | Geranylgeranyltransferase Type II alpha subunit (PGGTase-II, alpha subunit) |
| YER164W | -1 | -0.473 | CHD1 | transcriptional regulator |
| YDR436W | -1 | -0.475 | PPZ2 | serine-threonine phosphatase Z |
| YPL240C | -1 | -0.505 | hsp82 | 82 kDa heat shock protein\; homolog of mammalian Hsp90 |
| YGR167W | -1 | -0.513 | CLC1 | Clathrin light chain |
| YEL012W | -1 | -0.518 | UBC8 | ubiquitin-conjugating enzyme\; ubiquitin-protein ligase |
| YMR186W | -1 | -0.524 | HSC82 | constitutively expressed heat shock protein |
| YCL057W | -1 | -0.528 | prd1 | Saccharolysin (oligopeptidase yscD) |
| YOL013C | -1 | -0.535 | HRD1 | |
| YIL062C | -1 | -0.547 | ARC15 | |
| YGL233W | -1 | -0.563 | SEC15 | 113kD component of the Exocyst complex, which contains the gene products encoded by SEC3, SEC5, SEC6, SEC8, SEC10, SEC15 and EXO70. |
| YIR022W | -1 | -0.582 | sec11 | signal peptidase subunit |
| YBL101C | -1 | -0.589 | ECM21 | |
| YDR293C | -1 | -0.592 | ssd1 | putative protein phosphatase |
| YDR168W | -1 | -0.597 | cdc37 | |
| YBR170C | -1 | -0.597 | NPL4 | |
| YER023W | -1 | -0.606 | pro3 | delta 1-pyrroline-5-carboxylate reductase |
| YPL111W | -1 | -0.614 | car1 | arginase |
| YLR292C | -1 | -0.619 | SEC72 | protein involved in membrane protein insertion into the ER |
| YIL171W | -1 | -0.653 | HXT12 | hexose permease |
| YKR062W | -1 | -0.667 | TFA2 | Small subunit of TFIIE transcription factor |
| YKR052C | -1 | -0.669 | MRS4 | mitochondrial carrier protein, highly homologous to Mrs3p |
| YKL015W | -1 | -0.669 | put3 | zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type |
| YCR019W | -1 | -0.678 | MAK32 | |
| YFR010W | -1 | -0.685 | UBP6 | |
| YOL067C | -1 | -0.687 | RTG1 | Transcription factor (bHLH) involved in interorganelle communication between mitochondria, peroxisomes, and nucleus |
| YER136W | -1 | -0.687 | GDI1 | GDP dissociation inhibitor |
| YBR090C-A | -1 | -0.703 | ||
| YLR273C | -1 | -0.706 | PIG1 | Protein similar to Gac1p, a putative type 1 protein phosphatase targeting subunit |
| YDR495C | -1 | -0.707 | vps3 | |
| YKL019W | -1 | -0.72 | RAM2 | CAAX farnesyltransferase alpha subunit |
| YNL012W | -1 | -0.727 | spo1 | encodes a protein with high similarity to phospholipase B |
| YDR353W | -1 | -0.744 | TRR1 | Thioredoxin reductase |
| YKL196C | -1 | -0.745 | YKT6 | v-SNARE |
| YOR261C | 1 | -0.749 | RPN8 | Subunit of the regulatory particle of the proteasome |
| YOL056W | -1 | -0.75 | GPM3 | phosphoglycerate mutase |
| YGR209C | -1 | -0.752 | trx2 | thioredoxin |
| YMR004W | -1 | -0.766 | MVP1 | peripheral Golgi membrane protein |
| YDR443C | -1 | -0.766 | ssn2 | RNA polymerase II holoenzyme component |
| YDR092W | -1 | -0.771 | UBC13 | ubiquitin-conjugating enzyme |
| YDL087C | -1 | -0.775 | LUC7 | |
| YNL270C | -1 | -0.792 | ALP1 | Basic amino acid permease |
| YDR148C | -1 | -0.792 | KGD2 | dihydrolipoyl transsuccinylase component of alpha-ketoglutarate dehydrogenase complex in mitochondria |
| YKR001C | -1 | -0.797 | VPS1 | putative GTP-binding protein\; similar to mammalian Mx proteins |
| YDR058C | -1 | -0.798 | TGL2 | Triglyceride Lipase |
| YHR008C | -1 | -0.805 | sod2 | Manganese-containing superoxide dismutase |
| YDR145W | -1 | -0.811 | TAF61 | TFIID subunit |
| YOL123W | -1 | -0.813 | HRP1 | |
| YGL092W | -1 | -0.813 | NUP145 | |
| YGL087C | -1 | -0.813 | MMS2 | Similar to ubiquitin conjugating protein family |
| YMR109W | -1 | -0.815 | MYO5 | myosin I |
| YGR186W | -1 | -0.827 | TFG1 | Transcription factor TFIIF large subunit |
| YGL025C | -1 | -0.827 | PGD1 | |
| YBR275C | -1 | -0.828 | RIF1 | RAP1-interacting factor, involved in establishment of repressed chromatin |
| YKR008W | -1 | -0.833 | RSC4 | Member of RSC complex. |
| YDL126C | -1 | -0.834 | CDC48 | |
| YML130C | -1 | -0.837 | ERO1 | |
| YDL006W | -1 | -0.838 | PTC1 | serine-threonine protein phosphatase |
| YAL021C | -1 | -0.851 | ccr4 | 95 kDa containng leucine rich tandem repeats |
| YNL064C | -1 | -0.857 | ydj1 | yeast dnaJ homolog (nuclear envelope protein)\; heat shock protein |
| YHR161C | -1 | -0.861 | YAP1801 | |
| YDL078C | -1 | -0.874 | MDH3 | malate dehydrogenase |
| YLR268W | -1 | -0.882 | SEC22 | |
| YLR115W | -1 | -0.882 | CFT2 | Component of cleavage factor II (CF II)\; 105-kDa protein associated with polyadenylation factor 1 (PF I) |
| YMR100W | -1 | -0.885 | MUB1 | |
| YER027C | -1 | -0.886 | GAL83 | |
| YER022W | -1 | -0.886 | SRB4 | subunit of RNA polymerase II holoenzyme\/mediator complex |
| YPR122W | -1 | -0.887 | AXL1 | putative homolog of human insulin-degrading endoprotease |
| YGL190C | -1 | -0.9 | cdc55 | Protein phosphatase 2A regulatory subunit B |
| YJL005W | -1 | -0.907 | CYR1 | adenylate cyclase |
| YLR447C | -1 | -0.908 | vma6 | 36 kDa subunit (D subunit of VO sector) of the vacuolar H(+) ATPase\; required for assembly |
| YHR055C | -1 | -0.923 | CUP1 | copper-binding metallothionein |
| YGR281W | -1 | -0.93 | YOR1 | ABC transporter |
| YOR221C | -1 | -0.933 | MCT1 | malonyl CoA |
| YDR381W | -1 | -0.934 | YRA1 | Nuclear RNA-binding RNA annealing protein |
| YMR232W | -1 | -0.937 | fus2 | |
| YDR170C | -1 | -0.938 | sec7 | Guanine nucleotide exchange protein for ARF |
| YOR075W | -1 | -0.942 | UFE1 | endoplasmic reticulum t-SNARE, coprecipitates with Sec20p, Tip1p. and Sec22p |
| YBR256C | -1 | -0.944 | rib5 | Riboflavin synthase alpha-chain |
| YDL160C | -1 | -0.953 | DHH1 | |
| YGR097W | -1 | -0.962 | ASK10 | transcriptional activator of the SKN7 mediated 'two-component' regulatory system |
| YBL058W | -1 | -0.965 | SHP1 | |
| YIL048W | -1 | -0.969 | NEO1 | P-Type ATPase |
| YCR009C | -1 | -0.972 | RVS161 | |
| YOR290C | -1 | -0.984 | snf2 | transcriptional regulator |
| YOR014W | -1 | -0.987 | RTS1 | B-type regulatory subunit of protein phosphatase 2A (PP2A) |
| YPR173C | -1 | -0.991 | VPS4 | AAA-type ATPase |
| YDR423C | -1 | -0.992 | cad1 | basic leucine zipper transcription factor |
| YCR042C | -1 | -0.995 | TSM1 | TATA binding protein-associated factor (TAF) |
| YLR055C | -1 | -0.998 | spt8 | transcription factor, probable member of histone acetyltransferase SAGA complex |
| YDR356W | -1 | -1 | NUF1 | component of the spindle pole body that interacts with Spc42p, calmodulin, and a 35 kDa protein |
| YDR059C | -1 | -1 | ubc5 | ubiquitin-conjugating enzyme |
| YBR257W | -1 | -1 | POP4 | |
| YPR199C | -1 | -1.02 | ARR1 | |
| YPR129W | -1 | -1.02 | SCD6 | |
| YPR088C | -1 | -1.02 | SRP54 | Signal recognition particle subunit |
| YPL119C | -1 | -1.02 | DBP1 | putative ATP-dependent RNA helicase\; Dead box protein |
| YGR080W | -1 | -1.02 | TWF1 | Twinfilin A, an actin monomer sequestering protein |
| YGL210W | -1 | -1.02 | YPT32 | ras-like GTPase, highly homologous to YPT31 |
| YDR001C | -1 | -1.02 | NTH1 | neutral trehalase |
| YCR067C | -1 | -1.02 | SED4 | |
| YGR032W | -1 | -1.03 | GSC2 | catalytic component of 1,3-beta-D-glucan synthase |
| YER008C | -1 | -1.03 | sec3 | SEC3 encodes the 144 kD and 91 kD components of the Exocyst complex\; the 91 kD component is a C-terminal proteolytic breakdown product of full length Sec3p |
| YDR004W | -1 | -1.03 | rad57 | RecA homolog (similar to DMC1, RAD51, and RAD55), interacts with Rad 55p by two-hybrid analysis |
| YDL029W | -1 | -1.03 | ARP2 | actin-related protein |
| YAL067C | -1 | -1.03 | SEO1 | putative permease |
| YOR185C | -1 | -1.04 | gsp2 | GTP binding protein, almost identical to Gsp1p |
| YOR181W | -1 | -1.04 | LAS17 | Actin assembly factor |
| YNL318C | -1 | -1.04 | HXT14 | Member of the hexose transporter family |
| YER068W | -1 | -1.04 | MOT2 | putative zinc finger protein |
| YCL043C | -1 | -1.04 | PDI1 | protein disulfide isomerase |
| YBR001C | -1 | -1.04 | NTH2 | Neutral trehalase, highly homologous to Nth1p |
| YGL145W | -1 | -1.05 | TIP20 | transport protein that interacts with Sec20p\; required for protein transport from the endoplasmic reticulum to the golgi apparatus |
| YPR052C | -1 | -1.06 | NHP6A | 11-kDa nonhistone chromosomal protein |
| YFL036W | -1 | -1.06 | RPO41 | mitochondrial RNA polymerase II |
| YFL029C | -1 | -1.06 | CAK1 | Cyclin-dependent kinase-activating kinase |
| YPL122C | -1 | -1.07 | TFB2 | TFIIH subunit Tfb2\; has homology to CAK and human IIH subunits |
| YKR050W | -1 | -1.07 | trk2 | membrane protein\; low affinity potassium transport |
| YGL229C | -1 | -1.07 | SAP4 | |
| YGL035C | -1 | -1.07 | mig1 | C2H2 zinc finger protein which resembles the mammalian Egr and Wilms tumour proteins |
| YDR176W | -1 | -1.07 | NGG1 | transcription factor\; genetic and mutant analyses suggest that Ngg1p (Ada3p) is part of two transcriptional adaptor\/HAT (histone acetyltransferase complexes, the 0.8 MD ADA complex and the 1.8 MD SAGA complex |
| YBR279W | -1 | -1.07 | PAF1 | |
| YIL101C | -1 | -1.08 | XBP1 | transcriptional repressor |
| YHR117W | -1 | -1.08 | TOM71 | 71-kDa component of the protein translocase of the outer membrane of mitochondria |
| YPR025C | -1 | -1.09 | CCL1 | novel cyclin gene\; encodes subunits of TFIIK, a subcomplex of transcription factor TFIIH |
| YNL241C | -1 | -1.09 | zwf1 | Glucose-6-phosphate dehydrogenase |
| YER142C | -1 | -1.09 | MAG1 | 3-methyladenine DNA glycosylase |
| YCL050C | -1 | -1.09 | apa1 | diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase I |
| YOR046C | -1 | -1.1 | DBP5 | RNA helicase |
| YJL179W | -1 | -1.1 | PFD1 | Putative homolog of subunit 1 of bovine prefoldin, a chaperone comprised of six subunits |
| YFR002W | -1 | -1.1 | NIC96 | 96 kDa nucleoporin-interacting component |
| YBL066C | -1 | -1.1 | SEF1 | putative transcription factor |
| YPL120W | -1 | -1.11 | VPS30 | |
| YMR176W | -1 | -1.11 | ECM5 | |
| YKR009C | -1 | -1.11 | FOX2 | peroxisomal multifunctional beta-oxidation protein |
| YJR117W | -1 | -1.11 | STE24 | zinc metallo-protease that catalyzes the first step of N-terminal processing of the yeast a-factor precursor |
| YGR193C | -1 | -1.11 | PDX1 | Protein X component of mitochondrial pyruvate dehydrogenase complex |
| YGR098C | -1 | -1.11 | esp1 | |
| YGR044C | -1 | -1.11 | rme1 | zinc finger protein\; negative regulator of meiosis\; directly repressed by a1-a2 regulator |
| YER040W | -1 | -1.11 | gln3 | Transcriptional activator of nitrogen-regulated genes |
| YDR167W | -1 | -1.11 | TAF25 | TFIID subunit |
| YPR010C | -1 | -1.12 | ||
| YOL096C | -1 | -1.12 | COQ3 | 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase |
| YLR393W | -1 | -1.12 | ATP10 | |
| YLR288C | -1 | -1.12 | MEC3 | |
| YGL163C | -1 | -1.12 | rad54 | DNA-dependent ATPase |
| YDR263C | -1 | -1.12 | DIN7 | |
| YML042W | -1 | -1.13 | CAT2 | Carnitine O-acetyltransferase, peroxisomal and mitochondrial |
| YJR144W | -1 | -1.13 | MGM101 | |
| YDR258C | -1 | -1.13 | HSP78 | Mitochondrial heat shock protein 78 kDa |
| YDL004W | -1 | -1.13 | ATP16 | ATP synthase delta subunit |
| YOR321W | -1 | -1.14 | PMT3 | dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase |
| YNL121C | -1 | -1.14 | TOM70 | 70 kDa mitochondrial specialized import receptor of the outer membrane |
| YMR203W | -1 | -1.14 | TOM40 | Mitochondrial outer membrane protein\; forms the outer membrane import channel |
| YEL037C | -1 | -1.14 | rad23 | ubiquitin-like protein |
| YDR192C | -1 | -1.14 | NUP42 | 42-kD protein associated with nuclear pore complexes\; Nup42p is structurally related to the FG-nucleoporin family of pore proteins |
| YOR176W | -1 | -1.15 | HEM15 | ferrochelatase (protoheme ferrolyase) |
| YOL004W | -1 | -1.15 | sin3 | DNA binding protein involved in transcriptional regulation |
| YNL059C | -1 | -1.15 | ARP5 | Actin-related protein |
| YML069W | -1 | -1.15 | POB3 | binds DNA polymerase delta |
| YIL076W | -1 | -1.15 | SEC28 | epsilon-COP coatomer subunit Sec28p |
| YGL095C | -1 | -1.15 | VPS45 | cytosolic and peripheral membrane protein |
| YBR040W | -1 | -1.15 | FIG1 | integral membrane protein |
| YNL332W | -1 | -1.16 | THI12 | |
| YLR430W | -1 | -1.16 | sen1 | component of a nuclear-localized tRNA splicing complex |
| YLR208W | -1 | -1.16 | SEC13 | cytoplasmic protein involved in release of transport vesicles from the ER |
| YHR164C | -1 | -1.16 | DNA2 | DNA replication helicase |
| YER017C | -1 | -1.16 | AFG3 | ATP-dependent metalloprotease |
| YDR123C | -1 | -1.16 | INO2 | helix-loop-helix protein |
| YDL154W | -1 | -1.16 | MSH5 | MutS homolog involved in chromosome exchange |
| YOR124C | -1 | -1.17 | UBP2 | Ubiquitin-specific protease |
| YKR002W | -1 | -1.17 | PAP1 | poly(A) polymerase |
| YKL201C | -1 | -1.17 | mnn4 | |
| YKL025C | -1 | -1.17 | PAN3 | 76-kDa subunit of Pab1p-dependent poly(A) ribonuclease (PAN) |
| YJL089W | -1 | -1.17 | SIP4 | shows homology to DNA binding domain of Gal4p, has a leucine zipper motif and acidic region\; lexA-Sip4p activates transcription |
| YHR012W | -1 | -1.17 | VPS29 | |
| YGL195W | -1 | -1.17 | GCN1 | translational activator of GCN4 through activation of GCN2 in response to starvation |
| YER155C | -1 | -1.17 | bem2 | Rho-type GTPase activating protein (GAP) |
| YDR022C | -1 | -1.17 | CIS1 | |
| YDL065C | -1 | -1.17 | PEX19 | 40 kDa farnesylated protein associated with peroxisomes |
| YMR276W | -1 | -1.18 | DSK2 | ubiquitin-like protein |
| YLR158C | -1 | -1.18 | ASP3 | nitrogen catabolite-regulated cell-wall L-asparaginase II |
| YJR058C | -1 | -1.18 | APS2 | Clathrin-associated protein, small subunit |
| YHR057C | -1 | -1.18 | CYP2 | Peptidylprolyl isomerase (cyclophilin) ER or secreted |
| YHL019C | -1 | -1.18 | APM2 | |
| YGL192W | -1 | -1.18 | ime4 | transcription factor |
| YDR052C | -1 | -1.18 | DBF4 | cyclin-like kinase required for late nuclear division |
| YBR215W | -1 | -1.18 | HPC2 | highly charged, basic protein |
| YPR019W | -1 | -1.19 | CDC54 | |
| YOL135C | -1 | -1.19 | MED7 | Stoichiometric member of mediator complex |
| YNR006W | -1 | -1.19 | VPS27 | hydrophilic protein\; has cysteine rich putative zinc finger esential for function |
| YLR274W | -1 | -1.19 | CDC46 | |
| YKL104C | -1 | -1.19 | GFA1 | Glutamine_fructose-6-phosphate amidotransferase (glucoseamine-6-phosphate synthase) |
| YGR072W | -1 | -1.19 | UPF3 | |
| YDR080W | -1 | -1.19 | vps41 | |
| YCR014C | -1 | -1.19 | POL4 | DNA polymerase IV |
| YAL001C | -1 | -1.19 | TFC3 | transcription factor tau (TFIIIC) subunit 138 |
| YPL177C | -1 | -1.2 | CUP9 | putative DNA binding protein which shows similarity in homeobox domain to human proto-oncogene PBX1 |
| YMR234W | -1 | -1.2 | rnh1 | ribonuclease H |
| YFR040W | -1 | -1.2 | SAP155 | |
| YDR181C | -1 | -1.2 | SAS4 | |
| YNL238W | -1 | -1.21 | kex2 | Ca2+-dependent serine protease |
| YNL027W | -1 | -1.21 | CRZ1 | putative transcription factor |
| YJR148W | -1 | -1.21 | BAT2 | Branched-Chain Amino Acid Transaminase |
| YJL165C | -1 | -1.21 | HAL5 | |
| YGL058W | -1 | -1.21 | rad6 | Ubiquitin conjugating (E2) enzyme. The C-terminal 23 residues are critical for sporulation and histone polyubiquitinating activity, but not UV repair or induced mutagenesis. |
| YER169W | -1 | -1.21 | RPH1 | Repressor of PHR1 transcription\; binds to PHR1 URS |
| YDR195W | -1 | -1.21 | REF2 | |
| YCR093W | -1 | -1.21 | cdc39 | nuclear protein that negatively regulates basal transcription |
| YBR198C | -1 | -1.21 | TAF90 | |
| YDR232W | -1 | -1.22 | hem1 | 5-aminolevulinate synthase |
| YKL067W | -1 | -1.23 | YNK1 | Nucleoside diphosphate kinase |
| YGR255C | -1 | -1.23 | COQ6 | COQ6 monooxygenase |
| YER162C | -1 | -1.23 | rad4 | |
| YDL005C | -1 | -1.23 | MED2 | Stoichiometric member of mediator complex |
| YNR055C | -1 | -1.24 | hol1 | Putative ion transporter similar to the major facilitator superfamily of transporters |
| YMR020W | -1 | -1.24 | FMS1 | |
| YLR102C | -1 | -1.24 | APC9 | subunit of the anaphase promoting complex (APC) |
| YIR033W | -1 | -1.24 | MGA2 | |
| YIL038C | -1 | -1.24 | NOT3 | CCR4 trascriptional complex component |
| YDR460W | -1 | -1.24 | TFB3 | TFIIH subunit Tfb3 , contains ring finger motif\; similar to mammalian CAK subunit |
| YDR311W | -1 | -1.24 | TFB1 | Component of transcription initiation factor IIb, 75 kDa subunit |
| YPR120C | -1 | -1.25 | CLB5 | B-type cyclin |
| YLR309C | -1 | -1.25 | IMH1 | |
| YKR072C | -1 | -1.25 | sis2 | sit4 suppressor |
| YJL168C | -1 | -1.25 | SET2 | transcription factor containing a SET domain |
| YGL237C | -1 | -1.25 | hap2 | transcriptional activator protein of CYC1 |
| YBR193C | -1 | -1.25 | MED8 | Stoichiometric member of mediator complex |
| YAL013W | -1 | -1.25 | DEP1 | |
| YOR257W | -1 | -1.26 | cdc31 | calcium-binding protein component of spindle pole bodies, localizes to half-bridges and interacts with KAR1 |
| YNL071W | -1 | -1.26 | LAT1 | Dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complex |
| YNL039W | -1 | -1.26 | TFC5 | 90 kd subunit of TFIIIB, also called TFIIIB90 or B'' or B''90 component |
| YHL027W | -1 | -1.26 | RIM101 | |
| YBR130C | -1 | -1.26 | SHE3 | |
| YBL050W | -1 | -1.26 | SEC17 | peripheral membrane protein required for vesicular transport between ER and Golgi |
| YAR044W | -1 | -1.26 | OSH1 | Shows homology to the human oxysterol binding protein (OSBP) |
| YPL147W | -1 | -1.27 | PXA1 | ABC family long-chain fatty acid transporter |
| YPL085W | -1 | -1.27 | SEC16 | vesicle coat component |
| YNL183C | -1 | -1.27 | NPR1 | protein kinase homolog |
| YHR037W | -1 | -1.27 | put2 | delta-1-pyrroline-5-carboxylate dehydrogenase |
| YER168C | -1 | -1.27 | CCA1 | tRNA nucleotidyltransferase (tRNA CCA-pyrophosphorylase) |
| YAL054C | -1 | -1.27 | acs1 | inducible acetyl-coenzyme A synthetase |
| YOR250C | -1 | -1.28 | CLP1 | |
| YJL174W | -1 | -1.28 | kre9 | |
| YFR037C | -1 | -1.28 | RSC8 | |
| YFL009W | -1 | -1.28 | cdc4 | part of a ubiquitin ligase complex |
| YBR199W | -1 | -1.28 | KTR4 | Putative alpha-1,2-mannosyltransferase |
| YNL106C | -1 | -1.29 | INP52 | inositol polyphosphate 5-phosphatase |
| YML046W | -1 | -1.29 | PRP39 | RNA splicing factor associated with U1 snRNP |
| YLR378C | -1 | -1.29 | SEC61 | |
| YLR275W | -1 | -1.29 | SMD2 | |
| YKL007W | -1 | -1.29 | CAP1 | alpha subunit of capping protein |
| YGL153W | -1 | -1.29 | PEX14 | |
| YER161C | -1 | -1.29 | spt2 | non-specific DNA binding protein (sin1) |
| YER059W | -1 | -1.29 | PCL6 | |
| YDR432W | -1 | -1.29 | NPL3 | nuclear shuttling protein with an RNA recognition motif |
| YOR027W | -1 | -1.3 | STI1 | Heat shock protein also induced by canavanine and entry into stationary phase |
| YNL137C | -1 | -1.3 | nam9 | putative mitochondrial S4 ribosomal protein |
| YMR091C | -1 | -1.3 | NPL6 | |
| YMR089C | -1 | -1.3 | YTA12 | mitochondrial membrane ATPase of the CDC48\/PAS1\/SEC18 (AAA) family |
| YLR451W | -1 | -1.3 | leu3 | zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type |
| YKR068C | -1 | -1.3 | BET3 | transport protein particle (TRAPP) component |
| YGR143W | -1 | -1.3 | skn1 | encodes a predicted type II membrane protein highly homologous to Kre6p |
| YGR037C | -1 | -1.3 | ACB1 | Acyl-CoA-binding protein (ACBP)\/Diazepam binding inhibitor (DBI)\/endozepine (EP) |
| YFL055W | -1 | -1.3 | AGP3 | Amino acid permease |
| YNL225C | -1 | -1.31 | CNM67 | |
| YMR302C | -1 | -1.31 | prp12 | Integral membrane mitochondrial protein |
| YKL087C | -1 | -1.31 | CYT2 | cytochrome c1 heme lyase |
| YKL042W | -1 | -1.31 | SPC42 | component of the spindle pole body |
| YJL024C | -1 | -1.31 | APS3 | similar to Aps1p and mammalian small subunit (sigma-2 adaptin) of plasma membrane-associated clathrin assembly complex (AP-2) |
| YGL013C | -1 | -1.31 | PDR1 | zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type |
| YDR227W | -1 | -1.31 | sir4 | regulator of silent mating loci |
| YDL224C | -1 | -1.31 | WHI4 | Possible RNA binding protein. Homolog of Whi3. |
| YCL051W | -1 | -1.31 | LRE1 | |
| YPL173W | -1 | -1.32 | MRPL40 | Mitochondrial ribosomal protein MRPL40 (YmL40) |
| YOL064C | -1 | -1.32 | MET22 | 3'(2')5'-bisphosphate nucleotidase |
| YMR105C | -1 | -1.32 | pgm2 | Phosphoglucomutase |
| YJR059W | -1 | -1.32 | PTK2 | |
| YJL013C | -1 | -1.32 | MAD3 | spindle checkpoint complex subunit |
| YEL022W | -1 | -1.32 | GEA2 | ARF GTP\/GDP exchange factor |
| YDR135C | -1 | -1.32 | YCF1 | |
| YCR040W | -1 | -1.32 | MATalpha1 | transcripton factor involved in the regulation of the alpha-specific genes |
| YOR025W | -1 | -1.33 | HST3 | |
| YMR047C | -1 | -1.33 | NUP116 | Nuclear pore complex protein that is member of GLFG repeat-containing family of nucleoporins and is highly homologous to Nup100p |
| YJR159W | -1 | -1.33 | SOR1 | sorbitol-induced sorbitol dehydrogenase |
| YIL138C | -1 | -1.33 | TPM2 | Tropomyosin isoform 2 |
| YGL201C | -1 | -1.33 | MCM6 | |
| YDR301W | -1 | -1.33 | CFT1 | Component of pre-mRNA cleavage factor II (CFII)\; 150-kDa protein associated with polyadenylation factor 1 (PF I) |
| YDR171W | -1 | -1.33 | HSP42 | |
| YLL043W | -1 | -1.34 | FPS1 | glycerol channel protein |
| YJL073W | -1 | -1.34 | JEM1 | |
| YGR009C | -1 | -1.34 | SEC9 | Putative t-SNARE of the plasma membrane |
| YDR388W | -1 | -1.34 | rvs167 | (putative) cytoskeletal protein |
| YDR113C | -1 | -1.34 | PDS1 | 42-kDa nuclear protein |
| YPL001W | -1 | -1.35 | HAT1 | histone acetyltransferase |
| YNR057C | -1 | -1.35 | BIO4 | dethiobiotin synthetase |
| YMR224C | -1 | -1.35 | MRE11 | localizes to discrete sites in rad50s mutants. Mre11p, Rad50p, Mer2p and Xrs2p function in a complex by immunoprecipitation and two-hybrid analyses\; mutations in these genes have similar phenotypes. mRNA is induced in meiosis |
| YML103C | -1 | -1.35 | NUP188 | Nucleoporin |
| YLR216C | -1 | -1.35 | CPR6 | |
| YDR477W | -1 | -1.35 | snf1 | protein serine\/threonine kinase |
| YDR439W | -1 | -1.35 | LRS4 | |
| YBL023C | -1 | -1.35 | mcm2 | |
| YOL068C | -1 | -1.36 | HST1 | |
| YKL093W | -1 | -1.36 | MBR1 | |
| YGL206C | -1 | -1.36 | chc1 | presumed vesicle coat protein |
| YEL060C | -1 | -1.36 | prb1 | vacuolar protease B |
| YDR375C | -1 | -1.36 | BCS1 | Mitochondrial ATPase (AAA family) |
| YBR195C | -1 | -1.36 | msi1 | p50 subunit of the yeast Chromatin Assembly Factor-I (CAF-I) negative regulator of ras-mediated cAMP induction\; homologous to beta subunit of GTP-binding proteins |
| YBL033C | -1 | -1.36 | rib1 | GTP cyclohydrolase II |
| YPL010W | -1 | -1.37 | RET3 | vesicle coat component |
| YJR065C | -1 | -1.37 | ARP3 | |
| YGR132C | -1 | -1.37 | PHB1 | mitochondrial protein, prohibitin homolog\; similar to S. cerevisiae Phb2p |
| YDL106C | -1 | -1.37 | grf10 | Homeobox-domain containing transcription fractor which is a positive regulator of PHO5 and other genes. |
| YBR278W | -1 | -1.37 | DPB3 | C and C' subunits of DNA polymerase II |
| YAL030W | -1 | -1.37 | SNC1 | homolog of Snc2p, vesicle-associated membrane protein (synaptobrevin) homolog, forms a complex with Snc2p and Sec9p |
| YJR035W | -1 | -1.38 | RAD26 | DNA-dependent ATPase, homologous to human Cockayne syndrome B gene ERCC6, that is a putative helicase |
| YHR047C | -1 | -1.38 | AAP1' | arginine\/alanine aminopeptidase |
| YFL037W | -1 | -1.38 | tub2 | beta-tubulin |
| YER054C | -1 | -1.38 | GIP2 | |
| YEL003W | -1 | -1.38 | GIM4 | Putative homolog of subunit 2 of bovine prefoldin, a chaperone comprised of six subunits |
| YDL080C | -1 | -1.38 | THI3 | alpha-ketoisocaproate carboxylase |
| YOL094C | -1 | -1.39 | RFC4 | Subunit 4 of Replication Factor C\; homologous to human RFC 40 kDa subunit |
| YNL259C | -1 | -1.39 | ATX1 | Putative copper binding\/homeostasis protein |
| YMR268C | -1 | -1.39 | PRP24 | U4\/U6 snRNP protein |
| YMR164C | -1 | -1.39 | MSS11 | Predicted 758 amino acid polypeptide with poly-glutamine and poly-asparagine domains |
| YKL038W | -1 | -1.39 | RGT1 | transcriptional repressor and activator |
| YFR053C | -1 | -1.39 | hxk1 | Hexokinase I (PI) (also called Hexokinase A) |
| YDR118W | -1 | -1.39 | APC4 | subunit of the anaphase promoting complex (APC) |
| YBL088C | -1 | -1.39 | tel1 | putative phosphatidylinositol kinase |
| YPR185W | -1 | -1.4 | APG13 | |
| YOR278W | -1 | -1.4 | HEM4 | uroporphyrinogen III synthase |
| YNL188W | -1 | -1.4 | kar1 | |
| YKR097W | -1 | -1.4 | pck1 | phosphoenolpyruvate carboxylkinase |
| YKL157W | -1 | -1.4 | APE2 | aminopeptidase yscII |
| YFR034C | -1 | -1.4 | pho4 | myc-type helix-loop-helix transcription factor |
| YER125W | -1 | -1.4 | RSP5 | Rsp5p encodes a hect (homologous to E6-AP C terminus) and encodes a ubiquitin-protein ligase (E3 enzyme) |
| YEL032W | -1 | -1.4 | mcm3 | |
| YDR362C | -1 | -1.4 | TFC6 | 91 kDa tau91 subunit of transcription factor IIIC (TFIIIC) |
| YDL140C | -1 | -1.4 | rpo21 | RNA polymerase II large subunit |
| YMR219W | -1 | -1.41 | ESC1 | |
| YGR254W | -1 | -1.41 | ENO1 | enolase I |
| YDR419W | -1 | -1.41 | RAD30 | similar to E. coli DinB and S. cerevisiae REV1 |
| YDL202W | -1 | -1.41 | MRPL11 | Mitochondrial ribosomal protein MRPL11 (YmL11) |
| YPL149W | -1 | -1.42 | APG5 | |
| YOR033C | -1 | -1.42 | DHS1 | exonuclease |
| YNL097C | -1 |