| gene | class | score | Locus Name | GeneProduct |
| YFR050C | 1 | 2.41 | PRE4 | proteasome subunit necessary for peptidyl glutamyl peptide hydrolyzing activity |
| YDR394W | 1 | 2.21 | RPT3 | |
| YGL048C | 1 | 1.87 | RPT6 | ATPase |
| YDL007W | 1 | 1.79 | RPT2 | |
| YKL145W | 1 | 1.55 | RPT1 | putative ATPase, 26S protease subunit component |
| YDR427W | 1 | 1.54 | RPN9 | Subunit of the regulatory particle of the proteasome |
| YOR259C | 1 | 1.53 | RPT4 | ATPase\; component of the 26S proteasome cap subunit |
| YFR004W | 1 | 1.52 | RPN11 | Similar to S. pombe PAD1 gene product |
| YOR362C | 1 | 1.49 | PRE10 | proteasome component YC1 (protease yscE subunit 1) |
| YGR048W | -1 | 1.42 | UFD1 | |
| YJL001W | 1 | 1.39 | PRE3 | Subunit of 20S proteasome |
| YHL034C | -1 | 1.35 | sbp1 | |
| YER021W | 1 | 1.33 | RPN3 | component of the regulatory module of the 26S proteasome, homologous to human p58 subunit |
| YIL075C | 1 | 1.31 | RPN2 | RPN2p is a component of the 26S proteosome |
| YDL097C | 1 | 1.3 | RPN6 | Subunit of the regulatory particle of the proteasome |
| YOR117W | 1 | 1.24 | RPT5 | |
| YBR173C | 1 | 1.16 | UMP1 | 20S proteasome maturation factor |
| YGL011C | 1 | 1.03 | SCL1 | Proteasome subunit YC7alpha\/Y8 (protease yscE subunit 7) |
| YML092C | 1 | 1 | PRE8 | proteasome component Y7 |
| YGR135W | 1 | 0.999 | PRE9 | proteasome component Y13 |
| YPR103W | 1 | 0.992 | PRE2 | proteasome subunit |
| YGR253C | 1 | 0.954 | PUP2 | Proteasome subunit |
| YOR157C | 1 | 0.945 | pup1 | putative proteasome subunit |
| YLR025W | -1 | 0.879 | snf7 | |
| YPR108W | 1 | 0.873 | RPN7 | Subunit of the regulatory particle of the proteasome |
| YER094C | 1 | 0.834 | PUP3 | 20S proteasome subunit beta3_sc |
| YLR450W | -1 | 0.659 | hmg2 | 3-hydroxy-3-methylglutaryl-coenzyme A (HMG-CoA) reductase isozyme |
| YDR510W | -1 | 0.587 | SMT3 | |
| YDR054C | -1 | 0.562 | cdc34 | ubiquitin-conjugating enzyme, E2 |
| YKR001C | -1 | 0.523 | VPS1 | putative GTP-binding protein\; similar to mammalian Mx proteins |
| YHL030W | -1 | 0.516 | ECM29 | |
| YFR052W | 1 | 0.465 | RPN12 | cytoplasmic 32 - 34 kDa protein |
| YER012W | 1 | 0.415 | pre1 | 22.6 kDa proteasome subunit |
| YIL062C | -1 | 0.399 | ARC15 | |
| YDL147W | 1 | 0.367 | RPN5 | Subunit of the regulatory particle of the proteasome |
| YKL117W | -1 | 0.3 | SBA1 | Hsp90 (Ninety) Associated Co-chaperone |
| YKR062W | -1 | 0.298 | TFA2 | Small subunit of TFIIE transcription factor |
| YBR119W | -1 | 0.262 | MUD1 | U1 snRNP A protein |
| YBR050C | -1 | 0.258 | REG2 | |
| YGR080W | -1 | 0.236 | TWF1 | Twinfilin A, an actin monomer sequestering protein |
| YBR170C | -1 | 0.226 | NPL4 | |
| YDR436W | -1 | 0.144 | PPZ2 | serine-threonine phosphatase Z |
| YGL073W | -1 | 0.141 | HSF1 | heat shock transcription factor |
| YMR004W | -1 | 0.14 | MVP1 | peripheral Golgi membrane protein |
| YMR186W | -1 | 0.12 | HSC82 | constitutively expressed heat shock protein |
| YCL057W | -1 | 0.0784 | prd1 | Saccharolysin (oligopeptidase yscD) |
| YHR200W | 1 | 0.0708 | RPN10 | homolog of the mammalian S5a protein, component of 26S proteasome |
| YOL038W | 1 | 0.0641 | PRE6 | alpha-type of subunit of 20S proteasome |
| YKR066C | -1 | 0.0494 | CCP1 | Cytochrome-c peroxidase |
| YDL132W | -1 | -0.000495 | cdc53 | |
| YDR168W | -1 | -0.0156 | cdc37 | |
| YCR042C | -1 | -0.0234 | TSM1 | TATA binding protein-associated factor (TAF) |
| YER136W | -1 | -0.0247 | GDI1 | GDP dissociation inhibitor |
| YPL111W | -1 | -0.0511 | car1 | arginase |
| YDL029W | -1 | -0.0646 | ARP2 | actin-related protein |
| YDR004W | -1 | -0.0713 | rad57 | RecA homolog (similar to DMC1, RAD51, and RAD55), interacts with Rad 55p by two-hybrid analysis |
| YGR231C | -1 | -0.0801 | PHB2 | mitochondrial protein, prohibitin homolog\; homolog of mammalian BAP37 and S. cerevisiae Phb1p |
| YDL006W | -1 | -0.111 | PTC1 | serine-threonine protein phosphatase |
| YJL031C | -1 | -0.113 | BET4 | Geranylgeranyltransferase Type II alpha subunit (PGGTase-II, alpha subunit) |
| YNL012W | -1 | -0.114 | spo1 | encodes a protein with high similarity to phospholipase B |
| YCL052C | -1 | -0.124 | PBN1 | Protease B, nonderepressible form |
| YML130C | -1 | -0.14 | ERO1 | |
| YOL123W | -1 | -0.148 | HRP1 | |
| YMR022W | -1 | -0.178 | QRI8 | ubiquitin conjugating enzyme |
| YHR055C | -1 | -0.216 | CUP1 | copper-binding metallothionein |
| YOL067C | -1 | -0.233 | RTG1 | Transcription factor (bHLH) involved in interorganelle communication between mitochondria, peroxisomes, and nucleus |
| YJL008C | -1 | -0.256 | CCT8 | Component of Chaperonin Containing T-complex subunit eight |
| YMR314W | 1 | -0.269 | PRE5 | alpha-type of subunit of 20S proteasome |
| YDR092W | -1 | -0.283 | UBC13 | ubiquitin-conjugating enzyme |
| YDL087C | -1 | -0.301 | LUC7 | |
| YOR261C | 1 | -0.314 | RPN8 | Subunit of the regulatory particle of the proteasome |
| YHR008C | -1 | -0.362 | sod2 | Manganese-containing superoxide dismutase |
| YIR033W | -1 | -0.367 | MGA2 | |
| YGL095C | -1 | -0.378 | VPS45 | cytosolic and peripheral membrane protein |
| YGR193C | -1 | -0.396 | PDX1 | Protein X component of mitochondrial pyruvate dehydrogenase complex |
| YDR381W | -1 | -0.418 | YRA1 | Nuclear RNA-binding RNA annealing protein |
| YKR008W | -1 | -0.423 | RSC4 | Member of RSC complex. |
| YGL210W | -1 | -0.473 | YPT32 | ras-like GTPase, highly homologous to YPT31 |
| YFR010W | -1 | -0.476 | UBP6 | |
| YNL071W | -1 | -0.481 | LAT1 | Dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complex |
| YBR256C | -1 | -0.511 | rib5 | Riboflavin synthase alpha-chain |
| YLR115W | -1 | -0.523 | CFT2 | Component of cleavage factor II (CF II)\; 105-kDa protein associated with polyadenylation factor 1 (PF I) |
| YIR022W | -1 | -0.532 | sec11 | signal peptidase subunit |
| YDR058C | -1 | -0.537 | TGL2 | Triglyceride Lipase |
| YJL179W | -1 | -0.546 | PFD1 | Putative homolog of subunit 1 of bovine prefoldin, a chaperone comprised of six subunits |
| YIL171W | -1 | -0.547 | HXT12 | hexose permease |
| YCR036W | -1 | -0.556 | RBK1 | ribokinase |
| YBL101C | -1 | -0.572 | ECM21 | |
| YDR443C | -1 | -0.576 | ssn2 | RNA polymerase II holoenzyme component |
| YPL240C | -1 | -0.581 | hsp82 | 82 kDa heat shock protein\; homolog of mammalian Hsp90 |
| YHR047C | -1 | -0.597 | AAP1' | arginine\/alanine aminopeptidase |
| YEL012W | -1 | -0.6 | UBC8 | ubiquitin-conjugating enzyme\; ubiquitin-protein ligase |
| YDR181C | -1 | -0.615 | SAS4 | |
| YDR001C | -1 | -0.625 | NTH1 | neutral trehalase |
| YBR215W | -1 | -0.637 | HPC2 | highly charged, basic protein |
| YNL064C | -1 | -0.641 | ydj1 | yeast dnaJ homolog (nuclear envelope protein)\; heat shock protein |
| YFL036W | -1 | -0.671 | RPO41 | mitochondrial RNA polymerase II |
| YBR193C | -1 | -0.672 | MED8 | Stoichiometric member of mediator complex |
| YNL241C | -1 | -0.676 | zwf1 | Glucose-6-phosphate dehydrogenase |
| YDR353W | -1 | -0.704 | TRR1 | Thioredoxin reductase |
| YPR025C | -1 | -0.724 | CCL1 | novel cyclin gene\; encodes subunits of TFIIK, a subcomplex of transcription factor TFIIH |
| YKL015W | -1 | -0.743 | put3 | zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type |
| YPR155C | -1 | -0.767 | NCA2 | |
| YKL087C | -1 | -0.767 | CYT2 | cytochrome c1 heme lyase |
| YER022W | -1 | -0.772 | SRB4 | subunit of RNA polymerase II holoenzyme\/mediator complex |
| YNL183C | -1 | -0.784 | NPR1 | protein kinase homolog |
| YGR037C | -1 | -0.784 | ACB1 | Acyl-CoA-binding protein (ACBP)\/Diazepam binding inhibitor (DBI)\/endozepine (EP) |
| YDL126C | -1 | -0.786 | CDC48 | |
| YDR171W | -1 | -0.814 | HSP42 | |
| YDR356W | -1 | -0.821 | NUF1 | component of the spindle pole body that interacts with Spc42p, calmodulin, and a 35 kDa protein |
| YEL022W | -1 | -0.829 | GEA2 | ARF GTP\/GDP exchange factor |
| YML042W | -1 | -0.839 | CAT2 | Carnitine O-acetyltransferase, peroxisomal and mitochondrial |
| YDL020C | 1 | -0.839 | RPN4 | |
| YDR052C | -1 | -0.85 | DBF4 | cyclin-like kinase required for late nuclear division |
| YIL076W | -1 | -0.858 | SEC28 | epsilon-COP coatomer subunit Sec28p |
| YER023W | -1 | -0.859 | pro3 | delta 1-pyrroline-5-carboxylate reductase |
| YGL087C | -1 | -0.862 | MMS2 | Similar to ubiquitin conjugating protein family |
| YBR257W | -1 | -0.865 | POP4 | |
| YKL196C | -1 | -0.869 | YKT6 | v-SNARE |
| YGR209C | -1 | -0.883 | trx2 | thioredoxin |
| YCR019W | -1 | -0.883 | MAK32 | |
| YBR001C | -1 | -0.895 | NTH2 | Neutral trehalase, highly homologous to Nth1p |
| YBL041W | 1 | -0.896 | PRE7 | proteasome subunit |
| YMR280C | -1 | -0.911 | CAT8 | Zinc-cluster protein involved in activating gluconeogenic genes\; related to Gal4p |
| YDL154W | -1 | -0.918 | MSH5 | MutS homolog involved in chromosome exchange |
| YLR273C | -1 | -0.921 | PIG1 | Protein similar to Gac1p, a putative type 1 protein phosphatase targeting subunit |
| YJL013C | -1 | -0.93 | MAD3 | spindle checkpoint complex subunit |
| YKR009C | -1 | -0.937 | FOX2 | peroxisomal multifunctional beta-oxidation protein |
| YGL025C | -1 | -0.943 | PGD1 | |
| YBL056W | -1 | -0.943 | PTC3 | protein phosphatase type 2C |
| YDR059C | -1 | -0.945 | ubc5 | ubiquitin-conjugating enzyme |
| YJL089W | -1 | -0.946 | SIP4 | shows homology to DNA binding domain of Gal4p, has a leucine zipper motif and acidic region\; lexA-Sip4p activates transcription |
| YBR090C-A | -1 | -0.946 | ||
| YBL058W | -1 | -0.949 | SHP1 | |
| YHR053C | -1 | -0.951 | CUP1 | copper-binding metallothionein |
| YDL065C | -1 | -0.958 | PEX19 | 40 kDa farnesylated protein associated with peroxisomes |
| YLR216C | -1 | -0.96 | CPR6 | |
| YOR075W | -1 | -0.964 | UFE1 | endoplasmic reticulum t-SNARE, coprecipitates with Sec20p, Tip1p. and Sec22p |
| YLR292C | -1 | -0.968 | SEC72 | protein involved in membrane protein insertion into the ER |
| YPL122C | -1 | -0.973 | TFB2 | TFIIH subunit Tfb2\; has homology to CAK and human IIH subunits |
| YOL056W | -1 | -0.976 | GPM3 | phosphoglycerate mutase |
| YPL119C | -1 | -0.991 | DBP1 | putative ATP-dependent RNA helicase\; Dead box protein |
| YFR002W | -1 | -0.996 | NIC96 | 96 kDa nucleoporin-interacting component |
| YOL013C | -1 | -1 | HRD1 | |
| YPR173C | -1 | -1.02 | VPS4 | AAA-type ATPase |
| YNL318C | -1 | -1.02 | HXT14 | Member of the hexose transporter family |
| YGR207C | -1 | -1.02 | ||
| YER114C | -1 | -1.02 | BOI2 | |
| YGR167W | -1 | -1.04 | CLC1 | Clathrin light chain |
| YDR035W | -1 | -1.04 | ARO3 | DAHP synthase\; a.k.a. phospho-2-dehydro-3-deoxyheptonate aldolase, phenylalanine-inhibited\; phospho-2-keto-3-deoxyheptonate aldolase\; 2-dehydro-3-deoxyphosphoheptonate aldolase\; 3-deoxy-D-arabine-heptulosonate-7-phosphate synthase |
| YMR105C | -1 | -1.05 | pgm2 | Phosphoglucomutase |
| YER164W | -1 | -1.05 | CHD1 | transcriptional regulator |
| YHR183W | -1 | -1.07 | GND1 | |
| YGL153W | -1 | -1.07 | PEX14 | |
| YER017C | -1 | -1.08 | AFG3 | ATP-dependent metalloprotease |
| YCL043C | -1 | -1.08 | PDI1 | protein disulfide isomerase |
| YKL104C | -1 | -1.09 | GFA1 | Glutamine_fructose-6-phosphate amidotransferase (glucoseamine-6-phosphate synthase) |
| YDR293C | -1 | -1.1 | ssd1 | putative protein phosphatase |
| YJR064W | -1 | -1.11 | CCT5 | subunit of chaperonin subunit epsilon |
| YML069W | -1 | -1.12 | POB3 | binds DNA polymerase delta |
| YLR309C | -1 | -1.12 | IMH1 | |
| YDR192C | -1 | -1.12 | NUP42 | 42-kD protein associated with nuclear pore complexes\; Nup42p is structurally related to the FG-nucleoporin family of pore proteins |
| YDR263C | -1 | -1.13 | DIN7 | |
| YMR109W | -1 | -1.14 | MYO5 | myosin I |
| YMR100W | -1 | -1.14 | MUB1 | |
| YML008C | -1 | -1.14 | erg6 | S-adenoslymethionine: delta 24-methyltransferase |
| YLR393W | -1 | -1.14 | ATP10 | |
| YDR258C | -1 | -1.14 | HSP78 | Mitochondrial heat shock protein 78 kDa |
| YBR279W | -1 | -1.14 | PAF1 | |
| YBR278W | -1 | -1.14 | DPB3 | C and C' subunits of DNA polymerase II |
| YGL201C | -1 | -1.15 | MCM6 | |
| YGL145W | -1 | -1.15 | TIP20 | transport protein that interacts with Sec20p\; required for protein transport from the endoplasmic reticulum to the golgi apparatus |
| YOR027W | -1 | -1.16 | STI1 | Heat shock protein also induced by canavanine and entry into stationary phase |
| YHR164C | -1 | -1.17 | DNA2 | DNA replication helicase |
| YLR268W | -1 | -1.18 | SEC22 | |
| YGL013C | -1 | -1.18 | PDR1 | zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type |
| YFL029C | -1 | -1.18 | CAK1 | Cyclin-dependent kinase-activating kinase |
| YAL054C | -1 | -1.18 | acs1 | inducible acetyl-coenzyme A synthetase |
| YNL238W | -1 | -1.19 | kex2 | Ca2+-dependent serine protease |
| YER125W | -1 | -1.19 | RSP5 | Rsp5p encodes a hect (homologous to E6-AP C terminus) and encodes a ubiquitin-protein ligase (E3 enzyme) |
| YDR388W | -1 | -1.19 | rvs167 | (putative) cytoskeletal protein |
| YPR120C | -1 | -1.2 | CLB5 | B-type cyclin |
| YNL059C | -1 | -1.2 | ARP5 | Actin-related protein |
| YGR186W | -1 | -1.2 | TFG1 | Transcription factor TFIIF large subunit |
| YEL060C | -1 | -1.2 | prb1 | vacuolar protease B |
| YDL194W | -1 | -1.2 | snf3 | glucose sensor |
| YNL121C | -1 | -1.21 | TOM70 | 70 kDa mitochondrial specialized import receptor of the outer membrane |
| YJR065C | -1 | -1.21 | ARP3 | |
| YGL163C | -1 | -1.21 | rad54 | DNA-dependent ATPase |
| YOR031W | -1 | -1.22 | CRS5 | Metallothionein-like protein |
| YIL013C | -1 | -1.22 | PDR11 | Putative member of the ABC family of membrane transporters |
| YDR142C | -1 | -1.22 | PEX7 | Member of beta-transducin-related (WD-40) protein family |
| YMR232W | -1 | -1.23 | fus2 | |
| YLR102C | -1 | -1.23 | APC9 | subunit of the anaphase promoting complex (APC) |
| YKL127W | -1 | -1.24 | pgm1 | phosphoglucomutase, minor isoform |
| YBR035C | -1 | -1.24 | PDX3 | pyridoxine (pyridoxiamine) phosphate oxidase |
| YIR008C | -1 | -1.25 | PRI1 | p48 polypeptide of DNA primase |
| YNL039W | -1 | -1.26 | TFC5 | 90 kd subunit of TFIIIB, also called TFIIIB90 or B'' or B''90 component |
| YMR020W | -1 | -1.26 | FMS1 | |
| YGL233W | -1 | -1.26 | SEC15 | 113kD component of the Exocyst complex, which contains the gene products encoded by SEC3, SEC5, SEC6, SEC8, SEC10, SEC15 and EXO70. |
| YCR009C | -1 | -1.26 | RVS161 | |
| YBR288C | -1 | -1.26 | APM3 | clathrin associated protein medium chain |
| YJR076C | -1 | -1.27 | cdc11 | Component of 10 nm filaments of mother-bud neck |
| YER112W | -1 | -1.27 | LSM4 | U6 snRNA associated protein |
| YOL096C | -1 | -1.28 | COQ3 | 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase |
| YMR276W | -1 | -1.29 | DSK2 | ubiquitin-like protein |
| YDR477W | -1 | -1.29 | snf1 | protein serine\/threonine kinase |
| YPR052C | -1 | -1.3 | NHP6A | 11-kDa nonhistone chromosomal protein |
| YOR290C | -1 | -1.3 | snf2 | transcriptional regulator |
| YOL049W | -1 | -1.3 | GSH2 | Glutathione Synthetase |
| YDL224C | -1 | -1.3 | WHI4 | Possible RNA binding protein. Homolog of Whi3. |
| YPR193C | -1 | -1.32 | HPA2 | Histone acetyltransferase |
| YNL259C | -1 | -1.33 | ATX1 | Putative copper binding\/homeostasis protein |
| YKL135C | -1 | -1.33 | APL2 | Beta-adaptin, large subunit of the clathrin-associated protein (AP-1) complex |
| YJL111W | -1 | -1.33 | CCT7 | Component of Chaperonin Containing T-complex subunit seven |
| YGR202C | -1 | -1.33 | PCT1 | phosphorylcholine transferase\; or cholinephosphate cytidylyltransferase |
| YDR515W | -1 | -1.33 | SLF1 | |
| YKR002W | -1 | -1.34 | PAP1 | poly(A) polymerase |
| YJL102W | -1 | -1.34 | MEF2 | mitochondrial elongation factor G-like protein |
| YIL048W | -1 | -1.34 | NEO1 | P-Type ATPase |
| YDR495C | -1 | -1.34 | vps3 | |
| YOL135C | -1 | -1.35 | MED7 | Stoichiometric member of mediator complex |
| YJL076W | -1 | -1.35 | NET1 | |
| YOL064C | -1 | -1.37 | MET22 | 3'(2')5'-bisphosphate nucleotidase |
| YER059W | -1 | -1.37 | PCL6 | |
| YDR439W | -1 | -1.37 | LRS4 | |
| YNR006W | -1 | -1.38 | VPS27 | hydrophilic protein\; has cysteine rich putative zinc finger esential for function |
| YKL007W | -1 | -1.38 | CAP1 | alpha subunit of capping protein |
| YGL092W | -1 | -1.38 | NUP145 | |
| YJL053W | -1 | -1.39 | PEP8 | Vacuolar protein similar to mouse gene H |
| YFR040W | -1 | -1.39 | SAP155 | |
| YJR148W | -1 | -1.41 | BAT2 | Branched-Chain Amino Acid Transaminase |
| YGL229C | -1 | -1.41 | SAP4 | |
| YEL037C | -1 | -1.41 | rad23 | ubiquitin-like protein |
| YPR088C | -1 | -1.42 | SRP54 | Signal recognition particle subunit |
| YHR154W | -1 | -1.42 | ESC4 | |
| YCR032W | -1 | -1.42 | BPH1 | (putative) acetic acid export pump |
| YGR194C | -1 | -1.43 | ||
| YEL003W | -1 | -1.43 | GIM4 | Putative homolog of subunit 2 of bovine prefoldin, a chaperone comprised of six subunits |
| YDR167W | -1 | -1.43 | TAF25 | TFIID subunit |
| YML070W | -1 | -1.44 | DAK1 | putative dihydroxyacetone kinase |
| YJR032W | -1 | -1.44 | CPR7 | peptidyl-prolyl cis\/trans isomerase |
| YDR323C | -1 | -1.44 | pep7 | cytosolic and peripheral membrane protein with three zinc fingers\; cysteine rich regions of amino acids are essential for function |
| YBR026C | -1 | -1.44 | MRF1' | Nuclear protein that binds to T-rich strand of core consensus sequence of autonomously replicating sequence |
| YHR161C | -1 | -1.45 | YAP1801 | |
| YHR117W | -1 | -1.45 | TOM71 | 71-kDa component of the protein translocase of the outer membrane of mitochondria |
| YER014W | -1 | -1.45 | HEM14 | protoporphyrinogen oxidase |
| YDL143W | -1 | -1.45 | CCT4 | |
| YKL103C | -1 | -1.46 | LAP4 | vacuolar aminopeptidase ysc1 |
| YKL073W | -1 | -1.46 | LHS1 | novel member of the Hsp70 family of molecular chaperones that localizes to the lumen of the endoplasmic reticulum: |
| YKL042W | -1 | -1.46 | SPC42 | component of the spindle pole body |
| YGR044C | -1 | -1.46 | rme1 | zinc finger protein\; negative regulator of meiosis\; directly repressed by a1-a2 regulator |
| YBR198C | -1 | -1.46 | TAF90 | |
| YMR234W | -1 | -1.47 | rnh1 | ribonuclease H |
| YLR274W | -1 | -1.47 | CDC46 | |
| YGR281W | -1 | -1.47 | YOR1 | ABC transporter |
| YBL066C | -1 | -1.47 | SEF1 | putative transcription factor |
| YNL225C | -1 | -1.48 | CNM67 | |
| YML032C | -1 | -1.48 | rad52 | Interacts with Rad51p by two hybrid analysis. mRNA is induced in meiosis during recombination |
| YIL142W | -1 | -1.48 | CCT2 | |
| YHR106W | -1 | -1.48 | TRR2 | Thioredoxin reductase |
| YER068W | -1 | -1.48 | MOT2 | putative zinc finger protein |
| YPR019W | -1 | -1.49 | CDC54 | |
| YML126C | -1 | -1.49 | HMGS | 3-hydroxy-3-methylglutaryl coenzyme A synthase |
| YDL078C | -1 | -1.49 | MDH3 | malate dehydrogenase |
| YBR186W | -1 | -1.49 | PCH2 | Putative ATPase |
| YML048W | -1 | -1.5 | GSF2 | |
| YKL074C | -1 | -1.5 | MUD2 | |
| YFL053W | -1 | -1.5 | DAK2 | dihydroxyacetone kinase |
| YDR256C | -1 | -1.5 | CTA1 | catalase A |
| YDL106C | -1 | -1.5 | grf10 | Homeobox-domain containing transcription fractor which is a positive regulator of PHO5 and other genes. |
| YPL010W | -1 | -1.51 | RET3 | vesicle coat component |
| YDR292C | -1 | -1.51 | SRP101 | signal recognition particle receptor - alpha subunit |
| YCR094W | -1 | -1.51 | CDC50 | |
| YBL022C | -1 | -1.51 | PIM1 | mitochondrial ATP-dependent protease |
| YPL147W | -1 | -1.52 | PXA1 | ABC family long-chain fatty acid transporter |
| YFL009W | -1 | -1.52 | cdc4 | part of a ubiquitin ligase complex |
| YMR224C | -1 | -1.53 | MRE11 | localizes to discrete sites in rad50s mutants. Mre11p, Rad50p, Mer2p and Xrs2p function in a complex by immunoprecipitation and two-hybrid analyses\; mutations in these genes have similar phenotypes. mRNA is induced in meiosis |
| YJL034W | -1 | -1.53 | KAR2 | Homologue of mammalian BiP (GPR78) protein\; member of the HSP70 gene family |
| YER148W | -1 | -1.53 | spt15 | TATA-binding protein (tfIId) |
| YOR317W | -1 | -1.54 | FAA1 | long chain fatty acyl:CoA synthetase |
| YNL048W | -1 | -1.54 | ALG11 | |
| YMR197C | -1 | -1.54 | VTI1 | Vti1p is a v-SNARE that interacts with two t-SNARES, Sed5p and Pep12p |
| YIL004C | -1 | -1.54 | BET1 | |
| YGL192W | -1 | -1.54 | ime4 | transcription factor |
| YGL173C | -1 | -1.54 | KEM1 | DNA strand-transfer protein exoribonuclease I |
| YLL002W | -1 | -1.55 | KIM2 | |
| YJL002C | -1 | -1.55 | OST1 | 64-kDa, alpha subunit of oligosaccharyltransferase complex\; homologous to mammalian ribophorin I |
| YDR301W | -1 | -1.55 | CFT1 | Component of pre-mRNA cleavage factor II (CFII)\; 150-kDa protein associated with polyadenylation factor 1 (PF I) |
| YBR106W | -1 | -1.55 | PHO88 | |
| YBL023C | -1 | -1.55 | mcm2 | |
| YPR129W | -1 | -1.56 | SCD6 | |
| YPL177C | -1 | -1.56 | CUP9 | putative DNA binding protein which shows similarity in homeobox domain to human proto-oncogene PBX1 |
| YDL101C | -1 | -1.56 | dun1 | protein kinase |
| YOR221C | -1 | -1.57 | MCT1 | malonyl CoA |
| YER031C | -1 | -1.57 | YPT31 | ras-like GTPase, highly homologous to YPT32 |
| YOL043C | -1 | -1.58 | NTG2 | Endonuclease III-like glycosylase |
| YIL170W | -1 | -1.58 | HXT12 | hexose permease |
| YBR195C | -1 | -1.58 | msi1 | p50 subunit of the yeast Chromatin Assembly Factor-I (CAF-I) negative regulator of ras-mediated cAMP induction\; homologous to beta subunit of GTP-binding proteins |
| YOR321W | -1 | -1.59 | PMT3 | dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase |
| YOR185C | -1 | -1.59 | gsp2 | GTP binding protein, almost identical to Gsp1p |
| YNL298W | -1 | -1.59 | CLA4 | protein kinase, homologous to Ste20p, interacts with CDC42 |
| YML007W | -1 | -1.59 | YAP1 | jun-like transcription factor |
| YLR288C | -1 | -1.59 | MEC3 | |
| YCL050C | -1 | -1.59 | apa1 | diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase I |
| YAR044W | -1 | -1.59 | OSH1 | Shows homology to the human oxysterol binding protein (OSBP) |
| YOR003W | -1 | -1.6 | YSP3 | subtilisin-like protease III |
| YDR145W | -1 | -1.6 | TAF61 | TFIID subunit |
| YPL069C | -1 | -1.61 | BTS1 | geranylgeranyl diphosphate synthase |
| YBR040W | -1 | -1.61 | FIG1 | integral membrane protein |
| YLL043W | -1 | -1.62 | FPS1 | glycerol channel protein |
| YIL030C | -1 | -1.62 | SSM4 | integral nuclear membrane protein |
| YMR203W | -1 | -1.63 | TOM40 | Mitochondrial outer membrane protein\; forms the outer membrane import channel |
| YDR195W | -1 | -1.63 | REF2 | |
| YNL084C | -1 | -1.64 | END3 | Required for endocytosis and organization of the cytoskeleton |
| YDL202W | -1 | -1.64 | MRPL11 | Mitochondrial ribosomal protein MRPL11 (YmL11) |
| YAL001C | -1 | -1.64 | TFC3 | transcription factor tau (TFIIIC) subunit 138 |
| YPL243W | -1 | -1.65 | SRP68 | component of signal recognition particle |
| YJR117W | -1 | -1.65 | STE24 | zinc metallo-protease that catalyzes the first step of N-terminal processing of the yeast a-factor precursor |
| YDL005C | -1 | -1.65 | MED2 | Stoichiometric member of mediator complex |
| YNL106C | -1 | -1.66 | INP52 | inositol polyphosphate 5-phosphatase |
| YJR093C | -1 | -1.66 | FIP1 | |
| YJR058C | -1 | -1.66 | APS2 | Clathrin-associated protein, small subunit |
| YGR143W | -1 | -1.66 | skn1 | encodes a predicted type II membrane protein highly homologous to Kre6p |
| YFR037C | -1 | -1.66 | RSC8 | |
| YDR080W | -1 | -1.66 | vps41 | |
| YDL190C | -1 | -1.66 | UFD2 | |
| YOR025W | -1 | -1.67 | HST3 | |
| YLR028C | -1 | -1.67 | ADE16 | 5-aminoimidazole-4-carboxamide ribonucleotide (AICAR) transformylase\/IMP cyclohydrolase |
| YFR053C | -1 | -1.67 | hxk1 | Hexokinase I (PI) (also called Hexokinase A) |
| YDR118W | -1 | -1.67 | APC4 | subunit of the anaphase promoting complex (APC) |
| YAL067C | -1 | -1.67 | SEO1 | putative permease |
| YMR176W | -1 | -1.68 | ECM5 | |
| YLR085C | -1 | -1.68 | ARP6 | |
| YKL201C | -1 | -1.68 | mnn4 | |
| YCR014C | -1 | -1.68 | POL4 | DNA polymerase IV |
| YHR119W | -1 | -1.69 | SET1 | |
| YGL130W | -1 | -1.69 | CEG1 | mRNA guanylyltransferase (mRNA capping enzyme), alpha subunit |
| YLR275W | -1 | -1.7 | SMD2 | |
| YKR036C | -1 | -1.7 | CAF4 | component of CCR4 transcriptional complex |
| YKL213C | -1 | -1.7 | DOA1 | |
| YIR017C | -1 | -1.7 | MET28 | transcriptional activator in the Cbf1p-Met4p-Met28p complex |
| YDL059C | -1 | -1.7 | RAD59 | The RAD59 gene product has homology to the Rad52 protein. |
| YPL204W | -1 | -1.71 | HRR25 | casein kinase I isoform |
| YNR019W | -1 | -1.71 | ARE2 | Acyl-CoA cholesterol acyltransferase (sterol-ester synthetase) |
| YDR182W | -1 | -1.71 | CDC1 | |
| YBR024W | -1 | -1.71 | SCO2 | |
| YLR411W | -1 | -1.72 | CTR3 | Copper Transporter |
| YCR039C | -1 | -1.72 | alpha2 | |
| YBL050W | -1 | -1.72 | SEC17 | peripheral membrane protein required for vesicular transport between ER and Golgi |
| YPR134W | -1 | -1.73 | MSS18 | |
| YKL041W | -1 | -1.73 | VPS24 | |
| YGR241C | -1 | -1.73 | YAP1802 | |
| YDR170C | -1 | -1.73 | sec7 | Guanine nucleotide exchange protein for ARF |
| YGR132C | -1 | -1.74 | PHB1 | mitochondrial protein, prohibitin homolog\; similar to S. cerevisiae Phb2p |
| YPL120W | -1 | -1.75 | VPS30 | |
| YOR250C | -1 | -1.75 | CLP1 | |
| YJL085W | -1 | -1.75 | EXO70 | 70 kD component of the Exocyst complex\; required for exocytosis |
| YMR240C | -1 | -1.76 | CUS1 | U2 snRNP protein |
| YIL101C | -1 | -1.76 | XBP1 | transcriptional repressor |
| YGR255C | -1 | -1.76 | COQ6 | COQ6 monooxygenase |
| YGL206C | -1 | -1.76 | chc1 | presumed vesicle coat protein |
| YER027C | -1 | -1.76 | GAL83 | |
| YPR199C | -1 | -1.77 | ARR1 | |
| YOR257W | -1 | -1.77 | cdc31 | calcium-binding protein component of spindle pole bodies, localizes to half-bridges and interacts with KAR1 |
| YKL188C | -1 | -1.78 | PXA2 | peroxisomal ABC transporter 2 |
| YBR082C | -1 | -1.78 | ubc4 | ubiquitin-conjugating enzyme |
| YPR122W | -1 | -1.79 | AXL1 | putative homolog of human insulin-degrading endoprotease |
| YMR319C | -1 | -1.79 | FET4 | Low-affinity Fe(II) transport protein |
| YKR052C | -1 | -1.79 | MRS4 | mitochondrial carrier protein, highly homologous to Mrs3p |
| YDR272W | -1 | -1.79 | GLO2 | Cytoplasmic glyoxylase-II |
| YDR177W | -1 | -1.79 | ubc1 | ubiquitin-conjugating enzyme |
| YDL120W | -1 | -1.79 | YFH1 | Mitochondrial protein that regulates mitochondrial iron accumulation iron accumulation |
| YDL058W | -1 | -1.79 | USO1 | Integrin analogue gene |
| YMR302C | -1 | -1.8 | prp12 | Integral membrane mitochondrial protein |
| YFR028C | -1 | -1.8 | cdc14 | soluble tyrosine-specific protein phosphatase |
| YDR113C | -1 | -1.8 | PDS1 | 42-kDa nuclear protein |
| YNL330C | -1 | -1.81 | rpd3 | histone deacetylase |
| YLL024C | -1 | -1.81 | SSA2 | member of 70 kDa heat shock protein family |
| YCR018C | -1 | -1.81 | srd1 | |
| YPR185W | -1 | -1.82 | APG13 | |
| YNR049C | -1 | -1.82 | MSO1 | small hydrophilic protein, enriched in microsomal membrane fraction, interacts with Sec1p |
| YMR219W | -1 | -1.82 | ESC1 | |
| YAR008W | -1 | -1.82 | SEN34 | 34kDa subunit of the tetrameric tRNA splicing endonuclease |
| YJR025C | -1 | -1.83 | BNA1 | 3-hydroxyanthranilic acid dioxygenase |
| YFL037W | -1 | -1.83 | tub2 | beta-tubulin |
| YJL005W | -1 | -1.84 | CYR1 | adenylate cyclase |
| YGR274C | -1 | -1.84 | TAF145 | |
| YGL195W | -1 | -1.84 | GCN1 | translational activator of GCN4 through activation of GCN2 in response to starvation |
| YOL068C | -1 | -1.85 | HST1 | |
| YNL153C | -1 | -1.85 | GIM3 | Putative homolog of subunit 4 of bovine prefoldin, a chaperone comprised of six subunits |
| YDR034C | -1 | -1.85 | lys14 | |
| YDR030C | -1 | -1.85 | RAD28 | |
| YAR007C | -1 | -1.85 | RFA1 | 69 kDa subunit of the heterotrimeric RPA (RF-A) single-stranded DNA binding protein, binds URS1 and CAR1 |
| YGL156W | -1 | -1.86 | ams1 | vacuolar alpha mannosidase |
| YER142C | -1 | -1.86 | MAG1 | 3-methyladenine DNA glycosylase |
| YDR204W | -1 | -1.86 | COQ4 | |
| YLR026C | -1 | -1.87 | SED5 | Sed5p is a t-SNARE (soluble NSF attachment protein receptor) required in ER to Golgi transport. |
| YIL159W | -1 | -1.87 | BNR1 | |
| YDR423C | -1 | -1.87< |