| gene | class | score | Locus Name | GeneProduct |
| YHR051W | 1 | 2.09 | COX6 | subunit VI of cytochrome c oxidase |
| YGL187C | 1 | 1.59 | COX4 | subunit IV of cytochrome c oxidase |
| YLR395C | 1 | 1.36 | COX8 | Cytochrome-c oxidase chain VIII |
| YKL141W | 1 | 1.27 | SDH3 | succinate dehydrogenase cytochrome b |
| YDR529C | 1 | 1.27 | QCR7 | ubiquinol-cytochrome c oxidoreductase subunit 7 (14 kDa) |
| YLR038C | 1 | 1.22 | COX12 | subunit VIb of cytochrome c oxidase |
| YGL191W | 1 | 1.2 | COX13 | subunit VIa of cytochrome c oxidase, may specifically interact with ATP |
| YOR065W | 1 | 1.02 | CYT1 | Cytochrome c1 |
| YBL099W | 1 | 0.912 | ATP1 | mitochondrial F1F0-ATPase alpha subunit |
| YNL052W | 1 | 0.851 | COX5A | Cytochrome-c oxidase chain Va |
| YDR377W | 1 | 0.751 | ATP17 | ATP synthase subunit f |
| YKL085W | -1 | 0.653 | MDH1 | mitochondrial malate dehydrogenase |
| YML120C | -1 | 0.608 | NDI1 | mitochondrial NADH ubiquinone 6 oxidoreductase |
| YBL045C | 1 | 0.504 | COR1 | 44 kDa core protein of yeast coenzyme QH2 cytochrome c reductase |
| YEL024W | 1 | 0.493 | RIP1 | Rieske iron-sulfur protein of the mitochondrial cytochrome bc1 complex |
| YKL109W | -1 | 0.432 | HAP4 | transcriptional activator protein of CYC1 (component of HAP2\/HAP3 heteromer) |
| YLL041C | 1 | 0.423 | SDH2 | Succinate dehydrogenase (ubiquinone) iron-sulfur protein subunit |
| YPL078C | 1 | 0.406 | ATP4 | F(1)F(0)-ATPase complex delta subunit, mitochondrial |
| YPL262W | -1 | 0.376 | FUM1 | mitochondrial and cytoplasmic fumarase (fumarate hydralase) |
| YFR049W | -1 | 0.376 | YMR31 | mitochondrial ribosomal protein (precursor) |
| YBR039W | 1 | 0.339 | ATP3 | gamma subunit of mitochondrial ATP synthase |
| YJR121W | 1 | 0.329 | ATP2 | F(1)F(0)-ATPase complex beta subunit, mitochondrial |
| YLR295C | 1 | 0.31 | ATP14 | ATP synthase subunit h |
| YDL004W | 1 | 0.254 | ATP16 | ATP synthase delta subunit |
| YKL148C | 1 | 0.179 | SDH1 | flavoprotein subunit of succinate dehydrogenase |
| YDR298C | 1 | 0.138 | ATP5 | ATP synthase subunit 5\; oligomycin sensitivity-conferring protein |
| YDR456W | -1 | 0.125 | NHX1 | Na+\/H+ exchanger |
| YJL166W | 1 | 0.0972 | QCR8 | Ubiquinol cytochrome-c reductase subunit 8 (11 kDa protein) |
| YDR178W | 1 | 0.0187 | SDH4 | succinate dehydrogenase membrane anchor subunit |
| YKL150W | -1 | 0.00975 | MCR1 | NADH-cytochrome b5 reductase |
| YOR230W | -1 | -0.0625 | WTM1 | Transcriptional modulator |
| YIL162W | -1 | -0.0726 | SUC2 | invertase (sucrose hydrolyzing enzyme) |
| YKL067W | -1 | -0.0983 | YNK1 | Nucleoside diphosphate kinase |
| YGR183C | 1 | -0.134 | qcr9 | 7.3 kDa subunit 9 of the ubiquinol cytochrome c oxidoreductase complex |
| YFL018C | -1 | -0.148 | LPD1 | dihydrolipoamide dehydrogenase precursor (mature protein is the E3 component of alpha-ketoacid dehydrogenase complexes) |
| YMR081C | -1 | -0.156 | ISF1 | |
| YFR033C | 1 | -0.16 | QCR6 | ubiquinol-cytochrome c oxidoreductase subunit 6 (17 kDa) |
| YNL005C | -1 | -0.221 | MRP7 | Mitochondrial ribosomal protein MRP7 (YmL2) (E. coli L27) |
| YPL271W | 1 | -0.232 | ATP15 | nuclear gene for ATP synthase epsilon subunit |
| YBL015W | -1 | -0.306 | ACH1 | acetyl CoA hydrolase |
| YJR048W | -1 | -0.32 | cyc1 | iso-1-cytochrome c |
| YDL067C | 1 | -0.337 | COX9 | Subunit VIIa of cytochrome c oxidase |
| YCL025C | -1 | -0.339 | AGP1 | Amino acid permease |
| YKL016C | 1 | -0.352 | ATP7 | ATP synthase d subunit |
| YCL052C | -1 | -0.354 | PBN1 | Protease B, nonderepressible form |
| YDR513W | -1 | -0.387 | TTR1 | Glutaredoxin (thioltransferase) (glutathione reductase) |
| YAR015W | -1 | -0.405 | ade1 | phosphoribosyl amino imidazolesuccinocarbozamide synthetase |
| YKL043W | -1 | -0.42 | PHD1 | putative transcription factor |
| YOR125C | -1 | -0.443 | CAT5 | may encode a protein involved in one or more monoxygenase or hydroxylase steps of ubiquinone biosynthesis |
| YGR194C | -1 | -0.481 | ||
| YDR069C | -1 | -0.504 | DOA4 | ubiquitin isopeptidase |
| YGR020C | -1 | -0.508 | vma7 | |
| YMR027W | -1 | -0.512 | HRT2 | |
| YIR039C | -1 | -0.521 | YPS6 | GPI-anchored aspartic protease |
| YKL217W | -1 | -0.531 | JEN1 | carboxylic acid transporter protein homolog |
| YOL143C | -1 | -0.533 | RIB4 | 6,7-dimethyl-8-ribityllumazine synthase (DMRL synthase) |
| YML091C | -1 | -0.547 | RPM2 | subunit of mitochondrial RNase P |
| YJL026W | -1 | -0.555 | rnr2 | small subunit of ribonucleotide reductase |
| YJR095W | -1 | -0.582 | ACR1 | protein related to mitochondrial carriers |
| YOR036W | -1 | -0.595 | pep12 | integral membrane protein\; c-terminal TMD\; located in endosome |
| YER141W | -1 | -0.595 | COX15 | cytochrome oxidase assembly factor |
| YNL055C | -1 | -0.598 | POR1 | Outer mitochondrial membrane porin (voltage-dependent anion channel, or VDAC) |
| YBR078W | -1 | -0.605 | ECM33 | |
| YMR264W | -1 | -0.632 | CUE1 | Ubc7p binding and recruitment protein |
| YKL186C | -1 | -0.639 | MTR2 | mRNA transport regulator |
| YDR277C | -1 | -0.64 | MTH1 | Protein is 61\% identical to Msn3p |
| YPR191W | 1 | -0.651 | QCR2 | 40 kDa ubiquinol cytochrome-c reductase core protein 2 |
| YML110C | -1 | -0.653 | DBI56 | methyltransferase |
| YOR210W | -1 | -0.669 | RPB10 | RNA polymerase II subunit |
| YIL125W | -1 | -0.675 | kgd1 | alpha-ketoglutarate dehydrogenase |
| YDR343C | -1 | -0.69 | HXT6 | Hexose transporter |
| YEL009C | -1 | -0.7 | GCN4 | transcriptional activator of amino acid biosynthetic genes |
| YML129C | -1 | -0.709 | COX14 | mitochondrial membrane protein |
| YBL030C | -1 | -0.71 | pet9 | mitochondrial ADP\/ATP translocator |
| YGR174C | -1 | -0.729 | CBP4 | |
| YKR062W | -1 | -0.734 | TFA2 | Small subunit of TFIIE transcription factor |
| YGR028W | -1 | -0.746 | MSP1 | 40 kDa putative membrane-spanning ATPase |
| YOR244W | -1 | -0.754 | ESA1 | Acetyltransferase in the SAS gene family |
| YML078W | -1 | -0.755 | CPR3 | cyclophilin-3 (cyclosporin-sensitive proline rotamase-3) |
| YDR462W | -1 | -0.764 | MRPL28 | Mitochondrial ribosomal protein MRPL28 (YmL28) |
| YNL306W | -1 | -0.766 | ||
| YMR236W | -1 | -0.767 | TAF17 | TFIID subunit |
| YNL160W | -1 | -0.783 | YGP1 | YGP1 encodes gp37, a glycoprotein synthesized in response to nutrient limitation which is homologous to the sporulation-specific SPS100 gene |
| YKR061W | -1 | -0.785 | KTR2 | putative mannosyltransferase\; type 2 membrane protein |
| YKR014C | -1 | -0.785 | YPT52 | |
| YPL270W | -1 | -0.788 | MDL2 | |
| YDR342C | -1 | -0.805 | HXT7 | Hexose transporter |
| YDR148C | -1 | -0.808 | KGD2 | dihydrolipoyl transsuccinylase component of alpha-ketoglutarate dehydrogenase complex in mitochondria |
| YJR094C | -1 | -0.809 | IME1 | |
| YJR077C | -1 | -0.821 | MIR1 | Identified as mitochondrial import receptor (p32) and as PTP (PiC), a mitochondrial phosphate transport protein. |
| YPR047W | -1 | -0.832 | MSF1 | alpha subunit of yeast mitochondrial phenylalanyl-tRNA synthetase |
| YLR170C | -1 | -0.833 | APS1 | clathrin-associated protein complex, small subunit |
| YMR056C | -1 | -0.835 | AAC1 | mitochondrial ADP\/ATP translocator |
| YLR390W | -1 | -0.838 | ECM19 | |
| YMR302C | -1 | -0.84 | prp12 | Integral membrane mitochondrial protein |
| YHR147C | -1 | -0.842 | MRPL6 | Mitochondrial ribosomal protein MRPL6 (YmL6) |
| YGR080W | -1 | -0.845 | TWF1 | Twinfilin A, an actin monomer sequestering protein |
| YGR167W | -1 | -0.848 | CLC1 | Clathrin light chain |
| YER031C | -1 | -0.854 | YPT31 | ras-like GTPase, highly homologous to YPT32 |
| YLR203C | -1 | -0.856 | mss51 | |
| YIL062C | -1 | -0.862 | ARC15 | |
| YGR282C | -1 | -0.864 | BGL2 | Cell wall endo-beta-1,3-glucanase |
| YDL229W | -1 | -0.864 | ssb1 | cytoplasmic member of the HSP70 family |
| YDL137W | -1 | -0.864 | arf2 | ADP-ribosylation factor 2 |
| YKL093W | -1 | -0.866 | MBR1 | |
| YNL079C | -1 | -0.877 | TPM1 | tropomyosin I |
| YPR149W | -1 | -0.882 | NCE102 | |
| YOR150W | -1 | -0.883 | ||
| YMR220W | -1 | -0.884 | ERG8 | 48 kDa Phosphomevalonate kinase |
| YGL094C | -1 | -0.885 | PAN2 | 135-kDa protein that is subunit of poly(A) ribonuclease |
| YKR093W | -1 | -0.887 | PTR2 | Peptide transporter |
| YJR156C | -1 | -0.89 | THI11 | Thiamine biosynthetic enzyme |
| YJL042W | -1 | -0.89 | MHP1 | Putative microtubule-associated protein (MAP) |
| YDR007W | -1 | -0.891 | trp1 | n-(5'-phosphoribosyl)-anthranilate isomerase |
| YBL043W | -1 | -0.898 | ECM13 | |
| YMR024W | -1 | -0.899 | ||
| YMR022W | -1 | -0.902 | QRI8 | ubiquitin conjugating enzyme |
| YLR043C | -1 | -0.907 | trx1 | thioredoxin |
| YNL135C | -1 | -0.911 | fpr1 | peptidylprolyl cis-trans isomerase |
| YKL129C | -1 | -0.911 | MYO3 | myosin I |
| YJR158W | -1 | -0.916 | HXT16 | hexose permease |
| YJL180C | -1 | -0.918 | ATP12 | |
| YMR205C | -1 | -0.919 | pfk2 | phosphofructokinase beta subunit |
| YKL193C | -1 | -0.924 | SDS22 | Glc7p regulatory subunit |
| YGR180C | -1 | -0.936 | RNR4 | |
| YGL206C | -1 | -0.939 | chc1 | presumed vesicle coat protein |
| YDL048C | -1 | -0.94 | STP4 | |
| YDR001C | -1 | -0.943 | NTH1 | neutral trehalase |
| YKL003C | -1 | -0.946 | mrp17 | Mitochondrial ribosomal protein MRP17 |
| YDR050C | -1 | -0.953 | TPI1 | triosephosphate isomerase |
| YGL192W | -1 | -0.96 | ime4 | transcription factor |
| YDL135C | -1 | -0.965 | RDI1 | |
| YPR166C | -1 | -0.976 | mrp2 | 14 kDa mitochondrial ribosomal protein\; homologous to E. coli S14 protein |
| YLR304C | -1 | -0.979 | aco1 | Aconitase, mitochondrial |
| YOL096C | -1 | -0.989 | COQ3 | 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase |
| YMR296C | -1 | -0.991 | LCB1 | Probable component of serine palmitoyltransferase, which catalyzes the first step in biosynthesis of long-chain sphingolipids |
| YLL006W | -1 | -0.991 | MMM1 | mitochondrial outer membrane protein |
| YGR220C | -1 | -1 | MRPL9 | Mitochondrial ribosomal protein MRPL9 (YmL9) (E. coli L3) (human MRL3) |
| YDR497C | -1 | -1 | ITR1 | myo-inositol transporter |
| YOR259C | -1 | -1.01 | RPT4 | ATPase\; component of the 26S proteasome cap subunit |
| YMR089C | -1 | -1.01 | YTA12 | mitochondrial membrane ATPase of the CDC48\/PAS1\/SEC18 (AAA) family |
| YDR397C | -1 | -1.01 | NCB2 | |
| YJL063C | -1 | -1.02 | MRPL8 | Mitochondrial ribosomal protein MRPL8 (YmL8) (E. coli L17) |
| YPR019W | -1 | -1.03 | CDC54 | |
| YOR020C | -1 | -1.03 | HSP10 | 10 kDa mitochondrial heat shock protein |
| YFL039C | -1 | -1.03 | act1 | Actin |
| YDR322W | -1 | -1.03 | MRPL35 | Mitochondrial ribosomal protein MRPL35 (YmL35) |
| YOR136W | -1 | -1.04 | IDH2 | NAD+-dependent isocitrate dehydrogenase |
| YOL062C | -1 | -1.05 | APM4 | Clathrin associated protein, medium subunit |
| YKL079W | -1 | -1.05 | SMY1 | kinesin heavy chain homolog, but is not believed to act as a kinesin, colocalizes with Myo2p |
| YER001W | -1 | -1.05 | mnn1 | Alpha-1,3-mannosyltransferase |
| YMR021C | -1 | -1.06 | MAC1 | metal-binding transcriptional activator |
| YLR420W | -1 | -1.07 | ura4 | dihydrooratase |
| YKL062W | -1 | -1.07 | MSN4 | zinc finger protein |
| YJR006W | -1 | -1.07 | HYS2 | DNA polymerase delta 55 KD subunit |
| YJL102W | -1 | -1.07 | MEF2 | mitochondrial elongation factor G-like protein |
| YBR222C | -1 | -1.07 | FAT2 | |
| YKL060C | -1 | -1.08 | FBA1 | aldolase |
| YOR327C | -1 | -1.09 | SNC2 | vesicle-associated membrane protein (synaptobrevin) homolog |
| YOR158W | -1 | -1.09 | pet123 | Mitochondrial ribosomal protein of small subunit |
| YML028W | -1 | -1.09 | TSA1 | thioredoxin-peroxidase (TPx)\; reduces H2O2 and alkyl hydroperoxides with the use of hydrogens provided by thioredoxin, thioredoxin reductase, and NADPH |
| YGR076C | -1 | -1.09 | MRPL25 | Mitochondrial ribosomal protein MRPL25 (YmL25) |
| YBR037C | -1 | -1.09 | SCO1 | inner mitochondrial membrane protein |
| YMR272C | -1 | -1.1 | SCS7 | desaturase\/hydroxylase enzyme |
| YJL096W | -1 | -1.1 | ||
| YDR073W | -1 | -1.11 | SNF11 | component of SWI\/SNF global transcription activator complex |
| YNL330C | -1 | -1.12 | rpd3 | histone deacetylase |
| YLR298C | -1 | -1.12 | YHC1 | |
| YLR142W | -1 | -1.12 | put1 | proline oxidase |
| YLR240W | -1 | -1.13 | vps34 | phosphatidylinositol 3-kinase |
| YHR050W | -1 | -1.13 | SMF2 | localized to mitochondrial membrane |
| YGL208W | -1 | -1.13 | SIP2 | |
| YBR035C | -1 | -1.13 | PDX3 | pyridoxine (pyridoxiamine) phosphate oxidase |
| YOR092W | -1 | -1.14 | ECM3 | |
| YLR174W | -1 | -1.14 | IDP2 | Cytosolic form of NADP-dependent isocitrate dehydrogenase |
| YLL001W | -1 | -1.14 | DNM1 | Dynamin-related protein |
| YDL234C | -1 | -1.14 | gyp7 | GTPase-activating protein |
| YPR001W | -1 | -1.15 | cit3 | Mitochondrial isoform of citrate synthase |
| YNL315C | -1 | -1.15 | ATP11 | |
| YNL137C | -1 | -1.15 | nam9 | putative mitochondrial S4 ribosomal protein |
| YMR083W | -1 | -1.15 | adh3 | alcohol dehydrogenase isoenzyme III |
| YLR155C | -1 | -1.15 | ASP3 | nitrogen catabolite-regulated cell-wall L-asparaginase II |
| YGL255W | -1 | -1.15 | ZRT1 | |
| YBR221C | -1 | -1.15 | pdb1 | beta subunit of pyruvate dehydrogenase (E1 beta) |
| YMR261C | -1 | -1.16 | TPS3 | 115 kD regulatory subunit of trehalose-6-phosphate synthase\/phosphatase complex |
| YHR092C | -1 | -1.16 | hxt4 | High-affinity glucose transporter |
| YLR160C | -1 | -1.17 | ASP3 | nitrogen catabolite-regulated cell-wall L-asparaginase II |
| YPL104W | -1 | -1.18 | MSD1 | Aspartyl-tRNA synthetase, mitochondrial |
| YPL010W | -1 | -1.18 | RET3 | vesicle coat component |
| YNR045W | -1 | -1.18 | pet494 | translational activator of cytochrome c oxidase |
| YMR319C | -1 | -1.18 | FET4 | Low-affinity Fe(II) transport protein |
| YMR267W | -1 | -1.18 | ppa2 | mitochondrial inorganic pyrophosphatase |
| YJL154C | -1 | -1.18 | vps35 | retromer complex component |
| YCL067C | -1 | -1.18 | alpha2 | |
| YOL148C | -1 | -1.19 | SPT20 | transcription factor, member of the histone acetyltransferase SAGA complex |
| YIL138C | -1 | -1.19 | TPM2 | Tropomyosin isoform 2 |
| YER022W | -1 | -1.19 | SRB4 | subunit of RNA polymerase II holoenzyme\/mediator complex |
| YOR035C | -1 | -1.2 | SHE4 | |
| YNL117W | -1 | -1.2 | MLS1 | carbon-catabolite sensitive malate synthase |
| YKL087C | -1 | -1.2 | CYT2 | cytochrome c1 heme lyase |
| YGR255C | -1 | -1.2 | COQ6 | COQ6 monooxygenase |
| YGR207C | 1 | -1.2 | ||
| YPL031C | -1 | -1.21 | pho85 | negative transcriptional regulator, protein kinase homolog |
| YML113W | -1 | -1.21 | DAT1 | datin, an oligo(dA).oligo(dT)-binding protein |
| YGR222W | -1 | -1.21 | pet54 | translational activator of cytochrome c oxidase subunit III |
| YBR298C | -1 | -1.21 | MAL31 | |
| YOR067C | -1 | -1.22 | alg8 | glycosyl transferase |
| YOL116W | -1 | -1.22 | MSN1 | 43 kDa protein, transcriptional activator |
| YGL077C | -1 | -1.22 | HNM1 | Transporter (permease) for choline and nitrogen mustard\; share homology with UGA4 |
| YFL031W | -1 | -1.22 | HAC1 | bZIP (basic-leucine zipper) protein |
| YDR030C | -1 | -1.22 | RAD28 | |
| YML049C | -1 | -1.23 | rse1 | |
| YKL038W | -1 | -1.23 | RGT1 | transcriptional repressor and activator |
| YIL050W | -1 | -1.23 | PCL7 | PHO85 cyclin |
| YDL181W | -1 | -1.23 | INH1 | ATPase inhibitor |
| YPL097W | -1 | -1.24 | MSY1 | Tyrosyl-tRNA synthetase |
| YER178W | -1 | -1.24 | pda1 | alpha subunit of pyruvate dehydrogenase (E1 alpha) |
| YOR278W | -1 | -1.25 | HEM4 | uroporphyrinogen III synthase |
| YOR317W | -1 | -1.26 | FAA1 | long chain fatty acyl:CoA synthetase |
| YMR234W | -1 | -1.26 | rnh1 | ribonuclease H |
| YER088C | -1 | -1.26 | DOT6 | |
| YEL050C | -1 | -1.26 | RML2 | mitochondrial ribosomal protein L2 of the large subunit |
| YBR010W | -1 | -1.26 | HHT1 | Histone H3 (HHT1 and HHT2 code for identical proteins) |
| YNL252C | -1 | -1.27 | ||
| YMR208W | -1 | -1.27 | erg12 | mevalonate kinase |
| YGL062W | -1 | -1.27 | PYC1 | pyruvate carboxylase |
| YER153C | -1 | -1.27 | pet122 | translational activator of cytochrome c oxidase subunit III |
| YER098W | -1 | -1.27 | UBP9 | ubiquitin carboxyl-terminal hydrolase |
| YPR180W | -1 | -1.28 | AOS1 | |
| YNR049C | -1 | -1.28 | MSO1 | small hydrophilic protein, enriched in microsomal membrane fraction, interacts with Sec1p |
| YNL082W | -1 | -1.28 | pms1 | MutL homolog, similar to Mlh1p, associates with Mlh1p, possibly forming a heterodimer, Pms1p and Msh1p act in concert to bind to a Msh2p-heteroduplex complex containing a G-T mismatch |
| YLR157C | -1 | -1.28 | ASP3 | nitrogen catabolite-regulated cell-wall L-asparaginase II |
| YJR106W | -1 | -1.28 | ECM27 | |
| YGR029W | -1 | -1.28 | ERV1 | |
| YPL118W | -1 | -1.29 | MRP51 | Component of small subunit of the mitochondrial ribosome |
| YPL092W | -1 | -1.29 | SSU1 | major facilitator superfamily protein |
| YOL110W | -1 | -1.29 | SHR5 | |
| YLR025W | -1 | -1.29 | snf7 | |
| YHR096C | -1 | -1.29 | HXT5 | hexose transporter |
| YHL009C | -1 | -1.29 | yap3 | |
| YDL192W | -1 | -1.29 | arf1 | ADP-ribosylation factor |
| YLR299W | -1 | -1.3 | ECM38 | gamma-glutamyltransferase homolog |
| YJL054W | -1 | -1.3 | TIM54 | Translocase for the insertion of proteins into the mitochondrial inner membrane. |
| YGR244C | -1 | -1.3 | LSC2 | |
| YGR049W | -1 | -1.3 | SCM4 | |
| YDR406W | -1 | -1.3 | PDR15 | probable multidrug resistance transporter |
| YNL031C | -1 | -1.31 | HHT2 | Histone H3 (HHT1 and HHT2 code for identical proteins) |
| YKR066C | -1 | -1.31 | CCP1 | Cytochrome-c peroxidase |
| YKL013C | -1 | -1.31 | ARC19 | |
| YJL110C | -1 | -1.31 | GZF3 | GATA zinc finger protein 3 homologous to Dal80 in structure and function |
| YEL066W | -1 | -1.31 | HPA3 | |
| YDR225W | -1 | -1.31 | HTA1 | Histone H2A (HTA1 and HTA2 code for nearly identical proteins) |
| YOR148C | -1 | -1.32 | SPP2 | |
| YHR060W | -1 | -1.32 | VMA22 | |
| YFR010W | -1 | -1.32 | UBP6 | |
| YER026C | -1 | -1.32 | cho1 | phosphatidylserine synthase |
| YBR085W | -1 | -1.32 | AAC3 | mitochondrial ADP\/ATP translocator |
| YKR080W | -1 | -1.33 | MTD1 | NAD-dependent 5,10-methylenetetrahydrafolate dehydrogenase |
| YDR017C | -1 | -1.33 | kcs1 | Shows homology to basic leucine zipper family of transcription factors |
| YCR003W | -1 | -1.33 | MRPL32 | Mitochondrial ribosomal protein MRPL32 (YmL32) |
| YPR066W | -1 | -1.34 | UBA3 | ubiquitin-like protein activating enzyme |
| YOR209C | -1 | -1.34 | NPT1 | |
| YNR035C | -1 | -1.34 | ARC35 | |
| YNL073W | -1 | -1.34 | MSK1 | mitochondrial lysine-tRNA synthetase |
| YLR396C | -1 | -1.34 | vps33 | |
| YKR053C | -1 | -1.34 | YSR3 | DHS-1-P phosphatase |
| YKL035W | -1 | -1.34 | UGP1 | Uridinephosphoglucose pyrophosphorylase |
| YHR041C | -1 | -1.34 | srb2 | RNA polymerase II holoenzyme\/mediator subunit |
| YGR063C | -1 | -1.34 | spt4 | Zn-finger protein, transcriptional regulator |
| YGL115W | -1 | -1.34 | SNF4 | associates with Snf1p |
| YPR183W | -1 | -1.35 | DPM1 | dolichol phosphate mannose synthase |
| YGR166W | -1 | -1.35 | kre11 | |
| YGR013W | -1 | -1.35 | SNU71 | |
| YEL021W | -1 | -1.35 | ura3 | orotidine-5'-phosphate decarboxylase |
| YDL164C | -1 | -1.35 | cdc9 | DNA ligase |
| YMR167W | -1 | -1.36 | MLH1 | MutL homolog, forms a complex with Pms1p and Msh2p to repair mismatched DNA |
| YLR220W | -1 | -1.36 | CCC1 | Possible transmembrane Ca2+ transporter |
| YKL200C | -1 | -1.36 | ||
| YKL012W | -1 | -1.36 | PRP40 | U1 snRNP protein |
| YEL011W | -1 | -1.36 | glc3 | 1,4-glucan-6-(1,4-glucano)-transferase |
| YCR005C | -1 | -1.36 | CIT2 | non-mitochondrial citrate synthase |
| YBL090W | -1 | -1.36 | MRP21 | Component of the small subunit of mitochondrial ribosomes |
| YOR017W | -1 | -1.37 | pet127 | Mitochondrial membrane protein |
| YIL116W | -1 | -1.37 | his5 | histidinol-phosphate aminotransferase |
| YDL190C | -1 | -1.37 | UFD2 | |
| YNL185C | -1 | -1.38 | ||
| YGR088W | -1 | -1.38 | CTT1 | cytoplasmic catalase T |
| YGR084C | -1 | -1.38 | MRP13 | 35 kDa mitochondrial ribosomal small subunit protein |
| YBR251W | -1 | -1.38 | MRPS5 | Probable mitochondrial ribosomal protein S5 |
| YMR257C | -1 | -1.39 | pet111 | translational activator of cytochrome c oxidase subunit II |
| YLR369W | -1 | -1.39 | SSQ1 | mitochondrial hsp70-type molecular chaperone |
| YLR332W | -1 | -1.39 | MID2 | |
| YLR081W | -1 | -1.39 | gal2 | galactose permease |
| YER169W | -1 | -1.39 | RPH1 | Repressor of PHR1 transcription\; binds to PHR1 URS |
| YDR353W | -1 | -1.39 | TRR1 | Thioredoxin reductase |
| YCR020C | -1 | -1.39 | PET18 | |
| YOR187W | -1 | -1.4 | ||
| YKL152C | -1 | -1.4 | gpm1 | Phosphoglycerate mutase |
| YHR086W | -1 | -1.4 | NAM8 | putative RNA binding protein, involved in meiosis-specific splicing of the REC107 transcripts in cooperation with the Mer1 protein |
| YHR028C | -1 | -1.4 | DAP2 | Dipeptidyl aminopeptidase B (DPAP B) |
| YDR023W | -1 | -1.4 | ses1 | seryl-tRNA synthetase |
| YDL194W | -1 | -1.4 | snf3 | glucose sensor |
| YDL066W | -1 | -1.4 | IDP1 | Mitochondrial form of NADP-specific isocitrate dehydrogenase |
| YPL177C | -1 | -1.41 | CUP9 | putative DNA binding protein which shows similarity in homeobox domain to human proto-oncogene PBX1 |
| YOR204W | -1 | -1.41 | DED1 | |
| YOL033W | -1 | -1.41 | MSE1 | Mitochondrial glutamyl-tRNA synthetase |
| YJR034W | -1 | -1.41 | PET191 | |
| YIR032C | -1 | -1.41 | dal3 | ureidoglycolate hydrolase |
| YGL180W | -1 | -1.41 | APG1 | Protein kinase |
| YFL014W | -1 | -1.41 | HSP12 | 12 kDa heat shock protein |
| YOR002W | -1 | -1.42 | ALG6 | glucosyltransferase |
| YNR001C | -1 | -1.42 | CIT1 | citrate synthase. Nuclear encoded mitochondrial protein. |
| YNL003C | -1 | -1.42 | pet8 | |
| YKL019W | -1 | -1.42 | RAM2 | CAAX farnesyltransferase alpha subunit |
| YJL196C | -1 | -1.42 | ELO1 | |
| YNR041C | -1 | -1.43 | COQ2 | para hydroxybenzoate: polyprenyl transferase |
| YLR262C | -1 | -1.43 | YPT6 | highly homologous to the human GTPase, Rab6 |
| YKL184W | -1 | -1.43 | spe1 | Ornithine decarboxylase |
| YIL010W | -1 | -1.43 | DOT5 | |
| YHR012W | -1 | -1.43 | VPS29 | |
| YKL212W | -1 | -1.44 | SAC1 | integral membrane protein localizing to the ER and Golgi |
| YKL011C | -1 | -1.44 | cce1 | cruciform cutting endonuclease |
| YJL116C | -1 | -1.44 | NCA3 | |
| YHR064C | -1 | -1.44 | PDR13 | Hsp70 Protein |
| YGR008C | -1 | -1.44 | STF2 | ATPase stabilizing factor |
| YBR031W | -1 | -1.44 | RPL4A | Ribosomal protein L4A (L2A) (rp2) (YL2) |
| YPR168W | -1 | -1.45 | NUT2 | 21 kD mediator subunit of RNA polymerase II holoenzyme |
| YNL106C | -1 | -1.45 | INP52 | inositol polyphosphate 5-phosphatase |
| YML095C | -1 | -1.45 | rad10 | ssDNA endonuclease |
| YGR216C | -1 | -1.45 | gpi1 | |
| YDR323C | -1 | -1.45 | pep7 | cytosolic and peripheral membrane protein with three zinc fingers\; cysteine rich regions of amino acids are essential for function |
| YDR004W | -1 | -1.45 | rad57 | RecA homolog (similar to DMC1, RAD51, and RAD55), interacts with Rad 55p by two-hybrid analysis |
| YPL149W | -1 | -1.46 | APG5 | |
| YOR191W | -1 | -1.46 | RIS1 | contains motifs that are present in a family of DNA-dependent ATPases, the SWI2\/SNF2-like proteins |
| YOR032C | -1 | -1.46 | HMS1 | myc-family transcription factor homolog |
| YNL325C | -1 | -1.46 | FIG4 | |
| YMR271C | -1 | -1.46 | URA10 | Orotate phosphoribosyltransferase 2 |
| YIR011C | -1 | -1.46 | STS1 | |
| YHR132C | -1 | -1.46 | ECM14 | |
| YGR132C | -1 | -1.46 | PHB1 | mitochondrial protein, prohibitin homolog\; similar to S. cerevisiae Phb2p |
| YFL028C | -1 | -1.46 | CAF16 | ABC ATPase |
| YDR405W | -1 | -1.46 | MRP20 | 263-amino acid mitochondrial ribosomal large subunit protein\; similar to L23 family of ribosomal proteins |
| YCR018C | -1 | -1.46 | srd1 | |
| YBL021C | -1 | -1.46 | HAP3 | transcriptional activator protein of CYC1 |
| YPR055W | -1 | -1.47 | SEC8 | 121 kDa component of the Exocyst complex, which is required for exocytosis, and which also contains the gene products encoded by SEC3, SEC5, SEC6, SEC10, SEC15, and EXO70 |
| YLL009C | -1 | -1.47 | COX17 | cysteine-rich cytoplasmic protein |
| YJL208C | -1 | -1.47 | NUC1 | mitochondrial nuclease |
| YER161C | -1 | -1.47 | spt2 | non-specific DNA binding protein (sin1) |
| YNL192W | -1 | -1.48 | CHS1 | chitin synthase 1 |
| YGR217W | -1 | -1.48 | CCH1 | putative calcium channel |
| YGL009C | -1 | -1.48 | leu1 | isopropylmalate isomerase |
| YCL008C | -1 | -1.48 | stp22 | |
| YMR203W | -1 | -1.49 | TOM40 | Mitochondrial outer membrane protein\; forms the outer membrane import channel |
| YDR272W | -1 | -1.49 | GLO2 | Cytoplasmic glyoxylase-II |
| YDL174C | -1 | -1.49 | DLD1 | mitochondrial enzyme D-lactate ferricytochrome c oxidoreductase |
| YPL120W | -1 | -1.5 | VPS30 | |
| YOL127W | -1 | -1.5 | RPL25 | Ribosomal protein L25 (rpl6L) (YL25) |
| YLR191W | -1 | -1.5 | PEX13 | Peroxisomal membrane protein that contains Src homology 3 (SH3) domain |
| YGL035C | -1 | -1.5 | mig1 | C2H2 zinc finger protein which resembles the mammalian Egr and Wilms tumour proteins |
| YDL141W | -1 | -1.5 | BPL1 | Biotin:apoprotein ligase |
| YBR091C | -1 | -1.5 | MRS5 | |
| YBL003C | -1 | -1.5 | HTA2 | Histone H2A (HTA1 and HTA2 code for nearly identical proteins) |
| YPR113W | -1 | -1.51 | PIS1 | phosphatidylinositol synthase |
| YPL053C | -1 | -1.51 | KTR6 | mannosylphosphate transferase |
| YOR014W | -1 | -1.51 | RTS1 | B-type regulatory subunit of protein phosphatase 2A (PP2A) |
| YMR240C | -1 | -1.51 | CUS1 | U2 snRNP protein |
| YMR070W | -1 | -1.51 | MOT3 | 2 Cys2-His2 zinc fingers at c-terminus, glutamine and asparagine rich |
| YGR077C | -1 | -1.51 | PEX8 | peroxisome associated protein containing a PTS1 signal |
| YOL122C | -1 | -1.52 | SMF1 | has been localized to both the plasma membrane and the mitochondrial membrane |
| YHR044C | -1 | -1.52 | DOG1 | 2-deoxyglucose-6-phosphate phosphatase |
| YHR015W | -1 | -1.52 | MIP6 | |
| YDR226W | -1 | -1.52 | adk1 | cytosolic adenylate kinase |
| YPR193C | -1 | -1.53 | HPA2 | Histone acetyltransferase |
| YOR274W | -1 | -1.53 | MOD5 | transfer RNA isopentenyl transferase |
| YOR005C | -1 | -1.53 | DNL4 | ATP dependent DNA ligase |
| YMR150C | -1 | -1.53 | IMP1 | Inner membrane protease (mitochondrial protein) |
| YLR069C | -1 | -1.53 | MEF1 | mitochondrial elongation factor G-like protein |
| YKL125W | -1 | -1.53 | RRN3 | DNA-independent RNA Polymerase I transcription factor |
| YJL174W | -1 | -1.53 | kre9 | |
| YHR062C | -1 | -1.53 | RPP1 | Protein subunit of nuclear ribonuclease P (RNase P) |
| YHR043C | -1 | -1.53 | DOG2 | 2-deoxyglucose-6-phosphate phosphatase |
| YBL038W | -1 | -1.53 | MRPL16 | Mitochondrial ribosomal protein MRPL16 |
| YAL026C | -1 | -1.53 | DRS2 | Membrane-spanning Ca-ATPase (P-type),member of the cation transport (E1-E2) ATPases |
| YOR180C | -1 | -1.54 | EHD2 | Peroxisomal enoyl-CoA hydratase |
| YIR006C | -1 | -1.54 | PAN1 | |
| YHR038W | -1 | -1.54 | KIM4 | |
| YGL006W | -1 | -1.54 | PMC1 | putative vacuolar Ca2+ ATPase |
| YAL001C | -1 | -1.54 | TFC3 | transcription factor tau (TFIIIC) subunit 138 |
| YPR010C | -1 | -1.55 | ||
| YDR160W | -1 | -1.55 | SSY1 | |
| YDR139C | -1 | -1.55 | RUB1 | ubiquitin-like protein |
| YPR162C | -1 | -1.56 | ORC4 | 56-kDa subunit of origin recognition complex (ORC) |
| YOR254C | -1 | -1.56 | SEC63 | |
| YNL268W | -1 | -1.56 | LYP1 | lysine permease |
| YNL220W | -1 | -1.56 | ade12 | adenylosuccinate synthetase |
| YKL213C | -1 | -1.56 | DOA1 | |
| YIL139C | -1 | -1.56 | rev7 | subunit of DNA polymerase-zeta (Pol-zeta), an enzyme whose sole function appears to be translesion synthesis |
| YIL016W | -1 | -1.56 | snl1 | 18.3 kD integral membrane protein |
| YDR515W | -1 | -1.56 | SLF1 | |
| YDR079W | -1 | -1.56 | PET100 | cytochrome c oxidase-specific assembly factor |
| YPL024W | -1 | -1.57 | nce4 |