May 2008 Archives by date

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Starting: Thu May 1 03:12:45 PDT 2008
Ending: Sat May 31 18:50:21 PDT 2008
Messages: 177

• [Genome] MySQL Query   anmol kiran
• [Genome] Genes regulated by transcription factors   Kayla Smith
• [Genome] affymetrix   Pauline Fujita
• [Genome] Relation between minMatch and score   Jessica Wasserscheid
• [Genome] Relation between minMatch and score   Galt Barber
• [Genome] MySQL Query   Kayla Smith
• [Genome] dbSNP build 128   Shan Yang
• [Genome] dbSNP build 128   Ann Zweig
• [Genome] TFBS IMD:M000109   Ann Zweig
• [Genome] Relation between minMatch and score   Galt Barber
• [Genome] Question regarding mRNA seq   Bishwanath Chatterjee
• [Genome] Question regarding mRNA seq   Hiram Clawson
• [Genome] CTCF binding sites   Leonardo Beccari
• [Genome] Question regarding mRNA seq   Galt Barber
• [Genome] CTCF binding sites   Brooke Rhead
• [Genome] How to locate genomic location in the fasta file?   Jinchuan Xing
• [Genome] Mouse assembly differences   Dixie Mager
• [Genome] Question regarding mRNA seq   Brooke Rhead
• [Genome] Mouse Liftover   Steven Wilder
• [Genome] Human fetal brain exon array track   Nenad Sestan
• [Genome] Mouse Liftover   Pauline Fujita
• [Genome] Mouse assembly differences   Kayla Smith
• [Genome] uploading a gene list in the genome browser   Manisha Brahmachary
• [Genome] Downloading exon data selected by UniProt or RefseqP accessions   Magnus Bjursell
• [Genome] uploading a gene list in the genome browser   Pauline Fujita
• [Genome] A question about SNPs   Shan Yang
• [Genome] Downloading exon data selected by UniProt or RefseqP accessions   Brooke Rhead
• [Genome] A question about SNPs   Brooke Rhead
• [Genome] How to locate genomic location in the fasta file?   Brooke Rhead
• [Genome] chromTrf.tar.gz for mm9 contains symlinks but no data   Herve Pages
• [Genome] ucsc genome browser custom track problem   zxu
• [Genome] ucsc genome browser custom track problem   Ann Zweig
• [Genome] ucsc genome browser custom track problem   Hiram Clawson
• [Genome] mm6 conservation   thereal sisterdot
• [Genome] chromTrf.tar.gz for mm9 contains symlinks but no data   Ann Zweig
• [Genome] VISTA link to UCSC-display issue   Joanna DiSpirito
• [Genome] Finding Entrez gene numbers in C. elegans browser   Pace, John K
• [Genome] VISTA link to UCSC-display issue   Galt Barber
• [Genome] Build 36.1 Repeat Files   Ann Zweig
• [Genome] Phastcons scores for introns from Table Browser   Lakshmanan Iyer
• [Genome] chromTrf.tar.gz for mm9 contains symlinks but no data   Herve Pages
• [Genome] Human fetal brain exon array track   Donna Karolchik
• [Genome] Human fetal brain exon array track   ns44 at email.med.yale.edu
• [Genome] small caps in genome   Vesselin Baev
• [Genome] Settings for the simpleRepeat track   Palle Villesen (BiRC)
• [Genome] Finding Entrez gene numbers in C. elegans browser   Pauline Fujita
• [Genome] chromFa.zip file   Ann Zweig
• [Genome] mm6 conservation   Ann Zweig
• [Genome] Settings for the simpleRepeat track   Kayla Smith
• [Genome] small caps in genome   Kayla Smith
• [Genome] Phastcons scores for introns from Table Browser   Ann Zweig
• [Genome] Primers from alignments (was: Trying to plan conserved primers)   Maximilian Haeussler
• [Genome] liftOver application conversion error   Galt Barber
• [Genome] more efficient ways to access your data help   Florentino Sánchez García
• [Genome] more efficient ways to access your data help   Brooke Rhead
• [Genome] effect of using masked database   Mera Vigyan
• [Genome] query regarding chimp alleles   Aradhita Baral
• [Genome] regions annotations   Vesselin Baev
• [Genome] xenoRNA download from Orangutan database   Blythe, Jason
• [Genome] chimp annotations of regions   Vesselin Baev
• [Genome] query regarding chimp alleles   Brooke Rhead
• [Genome] xenoRNA download from Orangutan database   Brooke Rhead
• [Genome] Mistake   amowjoodi at sickkids.ca
• [Genome] xenoRNA download from Orangutan database   Galt Barber
• [Genome] [Genome-mirror] Mistake   Donna Karolchik
• [Genome] effect of using masked database   Galt Barber
• [Genome] EST orientation problem   Martin A. Hansen
• [Genome] effect of using masked database   Mera Vigyan
• [Genome] What up with the #bin?   Becker, Kevin (NIH/NIA/IRP) [E]
• [Genome] What up with the #bin?   Hiram Clawson
• [Genome] N-gap missing from liftAll.lft for chr8 in hg18   Herve Pages
• [Genome] order/ custom tracks   bina at purdue.edu
• [Genome] What up with the #bin?   Galt Barber
• [Genome] order/ custom tracks   Pauline Fujita
• [Genome] N-gap missing from liftAll.lft for chr8 in hg18   Robert Kuhn
• [Genome] EST orientation problem   Brooke Rhead
• [Genome] N-gap missing from liftAll.lft for chr8 in hg18   Herve Pages
• [Genome] N-gap missing from liftAll.lft for chr8 in hg18   Hiram Clawson
• [Genome] gnf fetal brain data - which stage?   Tania Oh
• [Genome] N-gap missing from liftAll.lft for chr8 in hg18   Herve Pages
• [Genome] N-gap missing from liftAll.lft for chr8 in hg18   Hiram Clawson
• [Genome] trying to extract DNA sequences for introns only   Sheila Reynolds
• [Genome] regions annotations   Brooke Rhead
• [Genome] chimp annotations of regions   Brooke Rhead
• [Genome] Alt Events track   Jacek Majewski
• [Genome] One trivial question   Shan Yang
• [Genome] trying to extract DNA sequences for introns only   Kayla Smith
• [Genome] gnf fetal brain data - which stage?   Kayla Smith
• [Genome] UCSC known genes and TSS   Maria Astrom
• [Genome] what port   N.Wieskamp at antrg.umcn.nl
• [Genome] what port   Hiram Clawson
• [Genome] what port   Hiram Clawson
• [Genome] Retrieve Human 3' UTR sequence   Malik Yousef
• [Genome] Retrieve Human 3' UTR sequence   Pauline Fujita
• [Genome] UCSC known genes and TSS   Kayla Smith
• [Genome] Compiler warnings about uninitialized variables on OS X Leopard   Pär Engström
• [Genome] Bug report: netToAxt   Tomas Vinar
• [Genome] Hg18 and NCBI 36.1   Anh Tran
• [Genome] timeout issues with GB   Amanda Miotto
• [Genome] (no subject)   herb lachman
• [Genome] Promoter multiz alignment files (upstream1000.maf)   Ari Loytynoja
• [Genome] (no subject)   Brooke Rhead
• [Genome] Hg18 and NCBI 36.1   Pauline Fujita
• [Genome] Promoter multiz alignment files (upstream1000.maf)   Brooke Rhead
• [Genome] Bug report: netToAxt   Galt Barber
• [Genome] (no subject)   Pete Shepard
• [Genome] hg18.snp128, non-synonymous snps   C.Gilissen at antrg.umcn.nl
• [Genome] Chain Vs Net tables   Fungazid
• [Genome] timeout issues with GB   Brooke Rhead
• [Genome] (no subject)   Kayla Smith
• [Genome] custom track error: Unrecognized format line 1   Xuning Wang
• [Genome] custom track error: Unrecognized format line 1   Galt Barber
• [Genome] chromTrf.tar.gz for mm9 contains symlinks but no data   Li, Jianying (NIH/NIEHS) [C]
• [Genome] chromTrf.tar.gz for mm9 contains symlinks but no data   Galt Barber
• [Genome] hg18.snp128, non-synonymous snps   Brooke Rhead
• [Genome] mRNA Track   Prof. Sangsoo Kim
• [Genome] snp128.txt vs web   Pierre LINDENBAUM
• [Genome] mRNA Track   Pauline Fujita
• [Genome] snp128.txt vs web   Pauline Fujita
• [Genome] Compiler warnings about uninitialized variables on OS X Leopard   Hiram Clawson
• [Genome] Error in liftOver program   Perumal, Narayanan B
• [Genome] Chain Vs Net tables   Kayla Smith
• [Genome] mRNA Track   Galt Barber
• [Genome] Error in liftOver program   Pauline Fujita
• [Genome] mutliz multiple alignment: reverse complement   Jeremy Darot
• [Genome] Sequences for dm4   Guruprasad Ananda
• [Genome] mRNA   Kayla Smith
• [Genome] regarding human deletions (looking at chimp Nov 2003 assembly)   Mittal, Vinay K
• [Genome] mutliz multiple alignment: reverse complement   Kayla Smith
• [Genome] a question about a database for "A high-resolution, nucleosome position map of C. elegans reveals a lack of universal sequence-dictated positioning"   akihiro mori
• [Genome] Suggestion for improving the LiftOver utility   Liang, Ping
• [Genome] a question about a database for "A high-resolution, nucleosome position map of C. elegans reveals a lack of universal sequence-dictated positioning"   Hiram Clawson
• [Genome] Further clarification of "func" definitions   Manolio, Teri (NIH/NHGRI) [E]
• [Genome] Suggestion for improving the LiftOver utility   Kayla Smith
• [Genome] Further clarification of "func" definitions   Kayla Smith
• [Genome] hg17 to hg18 liftOver and unmapped regions   Arkady
• [Genome] accessing data   Magdalena Auret
• [Genome] question about axt files   Chang, Li-Wei
• [Genome] 1 maf file in addition to individual maf files   Howard Rutiezer
• [Genome] convertion between assemblies failed   Jasinska, Anna
• [Genome] Please Help: im not finding some files on the ftp server   Nicolas Balcazar
• [Genome] 1 maf file in addition to individual maf files   Hiram Clawson
• [Genome] question about blat gfserver   SaraH Chahrazed GUETTOUCHE
• [Genome] help for retrieving 3' UTR sequences   Ramakrishna Sompallae
• [Genome] question about axt files   Brooke Rhead
• [Genome] accessing data   Brooke Rhead
• [Genome] liftAll.zip   Sneddon, Tam (NIH/NLM/NCBI) [E]
• [Genome] Please Help: im not finding some files on the ftp server   Brooke Rhead
• [Genome] genome browser interface   Charu Gupta Kumar
• [Genome] Promoter multiz alignment files (upstream1000.maf)   Ann Zweig
• [Genome] liftAll.zip   Brooke Rhead
• [Genome] difference between dm3 and FlyBase?   joseph
• [Genome] taxonomy ID   Yuan Jian
• [Genome] convertion between assemblies failed   Brooke Rhead
• [Genome] miRNAs and their genomic coordinates   nshomron at MIT.EDU
• [Genome] taxonomy ID   Fan Hsu
• [Genome] refseq mapping with NCBI gene ID.   Wishva Herath
• [Genome] taxonomy ID   Yuan Jian
• [Genome] taxonomy ID   Fan Hsu
• [Genome] taxonomy ID   Brooke Rhead
• [Genome] refseq mapping with NCBI gene ID.   Brooke Rhead
• [Genome] hgWiggle Phastcons   Pai, Deepa
• [Genome] L   Hiram Clawson
• [Genome] miRNAs and their genomic coordinates   Ann Zweig
• [Genome] gene promoters   Christine J. Jung
• [Genome] gene promoters   Ann Zweig
• [Genome] genome browser interface   Brooke Rhead
• [Genome] difference between dm3 and FlyBase?   Pauline Fujita
• [Genome] question about blat gfserver   Brooke Rhead
• [Genome] genome browser interface   Brooke Rhead
• [Genome] Repeat fragment in rat genome   Li, Jianying (NIH/NIEHS) [C]
• [Genome] Repeat fragment in rat genome   Hiram Clawson
• [Genome] Blat search using batch mode   Kayla Smith
• [Genome] how to get human protein mapped by tBlastn?   Xianjun Dong
• [Genome] Orthologous gene re-construction using xenomRNA   Lipovich, Leonard
• [Genome] how to get human protein mapped by tBlastn?   Pauline Fujita
• [Genome] custom refseq track questions?   zxu

Last message date: Sat May 31 18:50:21 PDT 2008
Archived on: Sat May 31 21:20:54 PDT 2008

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