[Genome] (no subject)

[Brooke Rhead]

Hello Herb,

Which assembly are you using?  I have confirmed that Uppsala ChIP-chip 
data is present on both hg17 and hg18. (The two data sets are named 
"Uppsala University, Sweden ChIP-chip" and "Uppsala University, Sweden 
ChIP-chip Na-butyrate time series".)

Are you by any chance looking at the hg16 or hg15 genome browser?  If 
you are looking at hg17 or hg18 and you still do not see the Uppsala 
data, try doing a cart reset by clicking on "Genomes" and then "Click 
here to reset the browser user interface settings to their defaults."

--
Brooke Rhead
UCSC Genome Bioinformatics Group


herb lachman wrote:
> I am a frequent user (and admirer) of the UCSC browser. I use the 
> site every day. I have been using the browser to examine regions we 
> have picked up on ChIP-chip experiments to see if other investigators 
> have immunoprecipitated the same regions in other systems ( using the 
> ENCODE immunoprecipitation and chromatin tracks. Up until today, I 
> have been able to see the results of Uppsala ChIP-chip experiments, 
> now I can't. What happened?
>
> Herb Lachman, M.D.
> Albert Einstein College of Medicine
> Departments of Medicine and Psychiatry
> phone 718-430-2428
> fax 718-430-8772 
>
> _______________________________________________
> Genome maillist  -  Genome at soe.ucsc.edu
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>