[Genome] trying to extract DNA sequences for introns only

Sheila Reynolds sheila at ee.washington.edu
Thu May 15 12:11:30 PDT 2008


I'm trying to extract the DNA sequences for introns only from the Genome
Browser.  Through the Tables option I tried to ask for the introns only from
the knownGene track for the ENCODE regions, but if I look at one of the
regions that is returned (for example chr6:41874646-41971039), it has some
exons in it (if I am interpreting the genome browser depiction correctly).

I'd appreciate any tips, I'm rather new at this.

thanks,

Sheila Reynolds
Dept of Electrical Engineering
University of Washington


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