[Genome] Mouse Liftover

[Pauline Fujita]

Hello Steven,

You can actually lift from mm5 to mm9 using lifts that are available on 
the genome browser. To lift from mm5 (May 2004) to mm9 (July 2007) you 
will have to perform two sequential lifts:

1. First lift from mm5 (May 2004) to mm8 (Feb 2006).
2. Then lift from mm8 (Feb 2006) to mm9 (July 2007).

Hopefully this information was helpful and answers your question. If you 
have further questions or require clarification feel free to contact the 
mailing list at genome at soe.ucsc.edu.

Regards,

Pauline Fujita
UCSC Genome Bioinformatics Group
http://genome.ucsc.edu

Steven Wilder wrote:
> I have received some data aligned to the mm5 mouse genome build and would 
> like to align it to the current mm9 build. Would it be possible for you to 
> create a Liftover file containing these mappings?
>
> Many thanks
>
> Steven
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