[Genome] Question regarding mRNA seq
Bishwanath Chatterjee
chatterb at mail.nih.gov
Mon May 5 09:13:48 PDT 2008
Hi
I am going through the mouse genome browser to look for PCSK5 gene. This
gene as per literature have two isoform A and B. The A isoform supposed to
be 915 aa and B form should be 2087 aa. On This genome site it shows two
forms one with 915 aa and other with 1485aa. The 1485 is part of the isoform
B. But when you click one 915aa seq, it also shows you 1485.
Also now UCSC browser shifted to their own nomenclature instead of
traditional Genbank accession. From Genbank accession, you can always go and
find the features of the cDNA. I am not sure how to find the link or if UCSC
browser have more details of the links from uc008gxp.1 ..
Thanks
Bishwanath
Bishwanath Chatterjee, Ph. D.
Building 10 Room 6N240
Laboratory of Developmental Biology
National Heart Lung and Blood Institute
National Institute of Health
Bethesda, MD 20892
Tel 301-451-1672
Fax 301-480-1808
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