[Genome] add custom tracks
Robert Kuhn
kuhn at soe.ucsc.edu
Fri Mar 7 14:43:10 PST 2008
Hello, again, Joao,
I would add that the feature you seek =is= available as browser output
from the Blat function, but it is not possible at this time to export
it as a custom track. You can maintain the capability only if you keep
a file of the sequences and rerun the blat when you wish to see it again.
best wishes,
--b0b
> From kuhn at soe.ucsc.edu Fri Mar 7 08:51:36 2008
> To: Joao.Fadista at agrsci.dk, genome at soe.ucsc.edu
> Subject: Re: [Genome] add custom tracks
>
> Joao,
>
> That is an excellent suggestion. It is not possible at the moment,
> but we will add it to our list of things we'd like to introduce into
> the Browser. I'm sorry that I can't give you an idea of if/when we'd
> be able to implement it.
>
> best wishes,
>
> --b0b kuhn
> ucsc genome bioinformatics group
>
>
> > From genome-bounces at soe.ucsc.edu Fri Mar 7 02:34:44 2008
> > To: <genome at soe.ucsc.edu>
> > Subject: [Genome] add custom tracks
> >
> > Hi,
> >
> > I would like to know if it is possible to add a custom track with the sequences
> > of my reads to be able to see SNPs in relation to the reference genome.
> >
> >
> >
> > Best regards
> >
> > João Fadista
> > Ph.d. student
> >
> >
> >
> > UNIVERSITY OF AARHUS
> > Faculty of Agricultural Sciences
> > Dept. of Genetics and Biotechnology
> > Blichers Allé 20, P.O. BOX 50
> > DK-8830 Tjele
> >
> > Phone: +45 8999 1900
> > Direct: +45 8999 1900
> > E-mail: Joao.Fadista at agrsci.dk <mailto:Joao.Fadista at agrsci.dk>
> > Web: www.agrsci.org <http://www.agrsci.org/>
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