[Genome] Get special sequences from UCSC browser

[Kayla Smith]

Hello Na,

Our Table Browser can be used to retrieve our Fly Base data.  Click on 
"Tables" on the blue bar on the top of the main page and select the 
following settings:

clade: Insect; genome: D. melanogaster; assembly: Apr. 2006
group: Genes and Gene Prediction Tracks; track: FlyBase Genes
table: flyBaseGene; region: genome; output format:  all fields from 
selected table;  click on "get output".

There is a link toward the top of the page for help on using the Table 
Browser.

Alternatively, the flyBaseGene table can be downloaded by clicking on 
"Downloads" --> "D. Melanogaster" --> "Annotation Database" or by 
clicking here:
http://hgdownload.cse.ucsc.edu/goldenPath/dm3/database/

I hope this is helpful to you.  Please don't hesitate to contact us 
again if you require further assistance.

Kayla Smith
UCSC Genome Bioinformatics Group



na liu wrote:
> Hi, professors:
> I want  all the FB elements in Drosophila melanogaster from UCSC browser.
> How can I get the full information about them, including the coordinate
> information, etc.
> 
> Look forward to your reply.
> 
> Best
> 
> Na
> _______________________________________________
> Genome maillist  -  Genome at soe.ucsc.edu
> http://www.soe.ucsc.edu/mailman/listinfo/genome