[Genome] Bug in table browser?

[Shan Yang]

Sorry, I take back this question. I saw data for chrX and chrY in the results. They are between chr9 and chr10. (quite unusual place!)

Shan

----- Original Message ----
From: Shan Yang <yang_shan88 at yahoo.com>
To: genome at soe.ucsc.edu
Sent: Tuesday, March 4, 2008 3:36:48 PM
Subject: Bug in table browser?


Hi, 

I 
want 
to 
get 
all 
gap 
coordinates 
of 
hg18 
through 
table 
browser. 
So 
I 
chose 
table 
as 
"Gap" 
and 
region 
as 
"genome" 
and 
then 
clicked 
"get 
output". 
But 
I 
found 
that 
there 
is 
no 
information 
for 
chrX, 
chrY 
and 
chrM. 
Not 
believing 
the 
result, 
I 
did 
the 
same 
thing 
and 
chose 
"position" 
and 
typed 
in 
"chrX". 
The 
query 
did 
return 
some 
gaps 
on 
chrX. 
The 
same 
is 
true 
for 
"chrY". 
And 
chrM 
seems 
have 
no 
gap.

So 
I 
am 
wondering 
if 
there 
is 
a 
bug 
in 
the 
table 
browser 
so 
that 
when 
query 
for 
"genome", 
chrX 
and 
chrY 
are 
not 
included, 
which 
I 
think 
it 
should. 
The 
results 
are 
quite 
misleading. 
In 
this 
case, 
make 
me 
think 
that 
there 
is 
no 
gap 
in 
sex 
chromosomes. 

So 
is 
there 
a 
bug 
or 
I 
did 
something 
wrong? 
Thanks!

Shan




  
  
  
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