[Genome] Bug in table browser?

Shan Yang yang_shan88 at yahoo.com
Tue Mar 4 15:36:48 PST 2008


Hi, 

I want to get all gap coordinates of hg18 through table browser. So I chose table as "Gap" and region as "genome" and then clicked "get output". But I found that there is no information for chrX, chrY and chrM. Not believing the result, I did the same thing and chose "position" and typed in "chrX". The query did return some gaps on chrX. The same is true for "chrY". And chrM seems have no gap.

So I am wondering if there is a bug in the table browser so that when query for "genome", chrX and chrY are not included, which I think it should. The results are quite misleading. In this case, make me think that there is no gap in sex chromosomes. 

So is there a bug or I did something wrong? Thanks!

Shan




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