[Genome] fetching multiple genomic DNA sequences, and mRNAs

[Ann Zweig]

Hello Fungazid,

	In addition to what my colleague, Hiram, has said, I would like to add 
the following.  The rabbit and elephant browsers have not been built for 
the public website.  But the sequence is available from our download 
server: http://hgdownload.cse.ucsc.edu/downloads.html#sequence_only

	You will also be able to extract sequence for the rabbit and elephant 
using the Conservation track on the latest human browser (hg18) and 
associated MAF files: 
http://hgdownload.cse.ucsc.edu/goldenPath/hg18/multiz28way/maf/


Regards,

----------
Ann Zweig
UCSC Genome Bioinformatics Group
http://genome.ucsc.edu



Hiram Clawson wrote:
> Good Afternoon Fungazid:
> 
> Please see similar answered question earlier today on
> the genome email list:
> http://www.soe.ucsc.edu/pipermail/genome/2008-January/015411.html
> 
> --Hiram
> 
> Fungazid wrote:
>> Hello,
>>
>> I would like to fetch multiple genomic sequences and
>> mRNA sequences of rabbit (orycun1), elephants
>> (loxafr1), and other guys. I am looking for a web
>> interface that gets a table of loci or scaffolds or
>> genes, and returns the sequences (or some really
>> reliable windows Perl API, that fetch it). I am also
>> interested in fetching all homologous genes mRNA
>> sequences for a given gene.
>>
>> Thank you for your help
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