[Genome] liftOver file request

[Brooke Rhead]

Hello Shane,

We have actually had this file for some time, but it was omitted from 
the download page.  Sorry for the oversight.  If you look there now:
http://hgdownload.cse.ucsc.edu/goldenPath/danRer4/liftOver/

. . . the file should be available.

Thank you for pointing this out.  If you have questions in the future, 
please do not hesitate to contact us again.

--
Brooke Rhead
UCSC Genome Bioinformatics Group



shane_giles at agilent.com wrote:
> I am interested in using liftOver to convert coordinates from danRer4 to danRer5.  I assume the file I am looking for is named danRer4ToDanRer5.over.chain.gz.  I am not able to find the file in the following folder.
> 
>  
> 
> //hgdownload.cse.ucsc.edu/goldenPath/danRer4/liftOver
> 
>  
> 
> Could you please tell me if this file is missing or if I am looking in the wrong location?  If it is missing do you know if it will be generated and if so when?
> 
>  
> 
> Take care,
> 
>  
> 
> B. Shane Giles
> 
>  
> 
> Research Scientist
> 
> Life Science Solutions Unit
> 
> Agilent Technologies
> 
> 5301 Stevens Creek Blvd MS 3L/M1
> 
> Santa Clara, CA 95051
> 
>  
> 
> shane_giles at agilent.com
> 
> (408) 553-2080
> 
>  
> 
> _______________________________________________
> Genome maillist  -  Genome at soe.ucsc.edu
> http://www.soe.ucsc.edu/mailman/listinfo/genome