[Genome] download of ucsc known genes
Kayla Smith
kayla at soe.ucsc.edu
Thu Jan 10 17:29:41 PST 2008
Hello Areum,
Yes, the knownGene table is downloadable here:
http://hgdownload.cse.ucsc.edu/goldenPath/mm8/database/knownGene.txt.gz
The mm8.knownGene table does not contain sequence data, so I'm not sure
how you are searching. If you want to find more information about the
sequence you've pasted, you could try BLATing it. Click on "BLAT" on
the blue bar on the top of the main page.
I hope this helps.
Kayla Smith
UCSC Genome Bioinformatics Group
Areum Han wrote:
> Hi. the ucsc known genes table is downloadable in the table browser?
>
> I downloaded knowngene table from table bowser but it does not have below exon, which is visible in genome browser.
>
>
>
>> exon_mm8
>
> TTGACCCATTGATCGATGATTACTCTGGAAGTGGAGgcaaat
>
>
>
> Sincerely yours,
>
> Areum Han.
>
> _______________________________________________
> Genome maillist - Genome at soe.ucsc.edu
> http://www.soe.ucsc.edu/mailman/listinfo/genome
More information about the Genome
mailing list