[Genome] Coding exons of genes in the human genome

[Ann Zweig]

Hello Siddarth,

	If you have successfully extracted the sequence for all Known Genes, but you 
only want the sequence for the canonical gene in each gene cluster, then my 
suggestion would be to use the output from the knownCanonical table to filter 
out those genes from your list that you are not interested in.

	If this does not address your issue, please feel free to write back to the 
genome list.


Regards,

----------
Ann Zweig
UCSC Genome Bioinformatics Group
http://genome.ucsc.edu

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SiddarthGautham Selvaraj wrote:
> Hi:
> 
> I am siddarth, a graduate student in Arizona State University. I have been
> trying to get the coding exon sequences of all genes in the human genome.
> 
> I define genes as an unit of the genome which codes for something. I do not
> need gene variants. That is a gene may get alternatively spliced to produce
> different products. I am not bothered on the variants a gene can produce
> through alternate splicing.
> 
> I tried KnownCanonical Table but I guess it does not focus on all exons.
> 
> Thus where can I get information on coding exons of all genes in the human
> genome.
> 
> Awaiting Your reply
> 
> Thanks
> siddarth
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