[Genome] human 3' utr seqs that do not cross hyb to orthologous rat gene seqs

[Richard Dixon]

Dear Genome people,

 

Please could someone tell me if it is possible to use the UCSC browser
to solve my task.

 

I have a list of ~1500 human genes for which I want to find the 3'utr
seqs (~70-100bps) that are NOT similar (eg :<75% similar) to the
orthologous Rat gene seq.

 

This is to design human oligo probes that will not cross hyb with rat
genes.

 

I would really appreciate your advice on this

 

Rick

 

Dr. Richard Dixon

 

Medical Solutions plc

1 Orchard Place

Nottingham Business Park

Nottingham, NG8 6PX

United Kingdom

 

Phone: +44 (0)115 973 9027

Email: richard.dixon at medical-solutions.co.uk

Web: http://www.medical-solutions.co.uk/

Fax: +44 (0)115 973 9021

 


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