[Genome] Genes regulated by transcription factors
Kayla Smith
kayla at soe.ucsc.edu
Tue Apr 22 13:37:32 PDT 2008
Hello Chun-Hsi,
If you click into an item in the "TFBS Conserved" track, you will see
some details about which genes are regulated.
Additionally, there is a companion table hg18.tfbsConsFactors which is
probably what you are looking for. It has the names of tfbs sites and
also the names of the genes they affect in a neighboring column.
I hope this information is helpful to you. Please don't hesitate to
contact us again if you require further assistance.
Kayla Smith
UCSC Genome Bioinformatics Group
pauhsi wrote:
> Hi,
>
> There is a table "tfbsConsSites", which records all the conserved transcription factor binding sites.
> There seems no information about the genes regulated by these TFBS.
> Could you please tell me how to find it?
>
> Best,
>
> Chen, Chun-Hsi
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