[Genome] can we set a maximum score upper bound for BLAT

Mera Vigyan meravigyan at gmail.com
Thu Apr 17 10:32:16 PDT 2008


I am a student from Italy.  I am using BLAT to know homology about genome
data.  Just llike "minScore", Can we set a parameter or fixing an maximum
score upper bound for BLAT ?
I want to run BLAT on a huge chunks of data with a maximum score upper
bound.  how to do that ?

thanks
Swaminathan


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