[Genome] liftOver support for converting March 2006 to July 2003 coordinates

Pauline Fujita pauline at soe.ucsc.edu
Tue Apr 15 11:10:23 PDT 2008


Hello Andrew,

You can actually batch convert from March 2006 to July 2003 in two steps 
simply liftOver from 2006 to 2004, then liftOver again from 2004 to 2003.

Hopefully this information was helpful and answers your question. If you 
have further questions or require clarification feel free to contact the 
mailing list at genome at soe.ucsc.edu.

Regards,

Pauline Fujita
UCSC Genome Bioinformatics Group
http://genome.ucsc.edu


Andrew Yee wrote:
> Is there a way to batch convert coordinates from the March 2006 assembly to
> the July 2003 assembly?  Currently, it seems to only conver to the May 2004
> assembly.
>
> Thanks,
> Andrew
> _______________________________________________
> Genome maillist  -  Genome at soe.ucsc.edu
> http://www.soe.ucsc.edu/mailman/listinfo/genome
>   



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