[Genome] custrom track help

Hiram Clawson hiram at soe.ucsc.edu
Tue Apr 15 10:34:05 PDT 2008


Good Morning Dr. Finlan:

You appear to be missing the specification line:
variableStep chrom=chr...

You haven't specified what chromosome to display
this data on.

Please note the description of the wiggle track
data input format:
http://genome.ucsc.edu/goldenPath/help/wiggle.html

--Hiram

lee finlan wrote:
> Dear Sir,
>                    I am trying to input my data into the ucsc browser.  the programmes registers an error in line 3 of my txt file.  After much playing around, I still cannot understand what it is that is wrong with my input information (line 3).  please would you take a loot at it for me.
>    
>   many thanks
>    
>   Lee
>   ------------------------------------------------------------------------
>             browser position chr11:10000-134110534
>     
>     
>     
>       browser full altGraph
>     
>     
>     
>     
>       track type=wiggle_0 name="open" description="open values" visibility="2"
>       
>     
>     
>     
>     
>     
>       183820
>     0.171
>
>   ------------------------------------------------------------------------------
> 
> 
> Dr Lee Finlan
> MRC Career Development Fellow
> Chromosomes & Gene Expression Laboratory
> MRC Human Genetics Unit 
> Crewe Road 
> Edinburgh 
> EH4 2XU 
> UK.
> 
> Email: lefinlan at yahoo.co.uk
>          
> Tel +44 (0)131 467 8400  ext 2308
> Fax +44 (0)131 467 8456
> www.hgu.mrc.ac.uk
>  between 0000-00-00 and 9999-99-99       <hr size=1> Yahoo! for Good helps you <a href="http://us.rd.yahoo.com/mailuk/taglines/isp/control/*http://us.rd.yahoo.com/evt=51947/*http://uk.promotions.yahoo.com/forgood/">make a difference</a>


More information about the Genome mailing list