[Genome] Ideogram mapping

Chu, Roy RChu at coh.org
Mon Apr 14 10:15:28 PDT 2008


Hi UCSC folks,

I want to map a number of features to ideograms for VERY basic
visualization purposes.  Let's say, I'm interested in comparing the
locations of Alu sequences to other features. By some number of
pre-processing steps, I can determine to what loci some particular
feature I'm looking at maps to, but does the UCSC browser (or the
under-the-hood source tree) have some pre-implemented tools available
for use?  My question is essentially what already-available resources
can I take advantage of to create my own ideograms?

Thanks in advance!
-Roy


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