[Genome] complete human protein sequence dataset
Robert Kuhn
kuhn at soe.ucsc.edu
Tue Apr 8 08:54:45 PDT 2008
correction: that's the knownGenePep table (no "s").
--b0b kuhn
On Tue, 08 Apr 2008 07:48:45 -0800
"Robert Kuhn" <kuhn at soe.ucsc.edu> wrote:
> Mark,
>
> The protein sequences for the UCSC Genes track are found
> in the knownGenesPep table. You can get them via the
> Table Browser. For other gene-prediction tracks, there
> is usually a *Pep table as well. They are also
>available
> for bulk download in the downloads section.
>
> best wishes,
> --b0b kuhn
> ucsc genome bioinformatics
> group
>
> On Mon, 07 Apr 2008 18:01:49 +0200
> Mark Cock <cock at sb-roscoff.fr> wrote:
>> Hi,
>>
>> I am looking for a complete list of proteins encoded by
>>the human genome
>> (with the protein sequences) for a comparative genomics
>>project. Would
>> you have such a thing or know where I could find the
>>best compilation. I
>> would prefer to have one protein per gene if possible,
>>ie. not
>> alteranative products due to alternative splicing.
>>
>> Thanks in advance for your help.
>>
>> best regards,
>>
>> Mark
>>
>> --
>> J. Mark Cock
>> Algal Genetics Group, UMR 7139 CNRS-UPMC
>> Végétaux Marins et Biomolécules (Marine Plants and
>>Biomolecules)
>> Station Biologique, Place Georges Teissier, BP74
>> 29682 Roscoff Cedex, France
>> 48° 43' 37.33" N 3° 59' 17.41" W
>> Tel: 33 2 98 29 23 60, Fax: 33 2 98 29 23 85
>> Email: cock at sb-roscoff.fr
>> http://www.sb-roscoff.fr/UMR7139/en/genetics.html
>>
>> _______________________________________________
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>
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