[Genome] table

Hiram Clawson hiram at soe.ucsc.edu
Tue Apr 8 07:14:31 PDT 2008


Good Morning Yuan:

You can download all the exons from the table browser.
They will all have different names.  Select knownGenes
in the table browser, then get all the exons as output.

--Hiram

Yuan Jian wrote:
> do you have a table whose key is exon?
>   I download table knowngenes. but its exons are in the form "XXX,XXX,XXX"
>   it is very hard to find how many genes have an specific exon.
>   I really need this information.
>    
>   thank you
>    
>   Yuan
>   
> 
> Ann Zweig <ann at soe.ucsc.edu> wrote:
>   Hello Yuan,
> 
> We do not assign specific IDs to exons in any of the gene tracks that we create 
> in the genome browser. However, you can use the Table Browser to download the 
> exons of any gene track. Read more about using the Table Browser here: 
> http://genome.ucsc.edu/goldenPath/help/hgTablesHelp.html
> 
> If you have more specific questions, please don't hesitate to contact the mail 
> list again.
> 
> 
> Regards,
> 
> ----------
> Ann Zweig
> UCSC Genome Bioinformatics Group
> http://genome.ucsc.edu


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