[Genome] table
Hiram Clawson
hiram at soe.ucsc.edu
Tue Apr 8 07:14:31 PDT 2008
Good Morning Yuan:
You can download all the exons from the table browser.
They will all have different names. Select knownGenes
in the table browser, then get all the exons as output.
--Hiram
Yuan Jian wrote:
> do you have a table whose key is exon?
> I download table knowngenes. but its exons are in the form "XXX,XXX,XXX"
> it is very hard to find how many genes have an specific exon.
> I really need this information.
>
> thank you
>
> Yuan
>
>
> Ann Zweig <ann at soe.ucsc.edu> wrote:
> Hello Yuan,
>
> We do not assign specific IDs to exons in any of the gene tracks that we create
> in the genome browser. However, you can use the Table Browser to download the
> exons of any gene track. Read more about using the Table Browser here:
> http://genome.ucsc.edu/goldenPath/help/hgTablesHelp.html
>
> If you have more specific questions, please don't hesitate to contact the mail
> list again.
>
>
> Regards,
>
> ----------
> Ann Zweig
> UCSC Genome Bioinformatics Group
> http://genome.ucsc.edu
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