[Genome] synteny map
Hiram Clawson
hiram at soe.ucsc.edu
Mon Sep 17 10:07:05 PDT 2007
Good Morning Junjie:
Your attachment is not allowed through on the email list.
Were you looking for something such as the following:
http://genome-test.cse.ucsc.edu/~hiram/Synteny/index.html
These pictures are made directly from the genome browser. These
are the net tracks in dense mode from a full chromosome view. Each chromosome
net track individually extracted from the genome browser and assembled
into these composite images.
Can you supply a URL reference to the item you mentioned you had attached ?
--Hiram
jlu at bio.fsu.edu wrote:
> Dear UCSC,
>
> I did some study on synteny maps between species (human vs mouse) but
> didn't find anything that can give something as simple as what I
> attached here. The net/chain files are quite complicated and don't seems
> to do this. Could you please give me some hint as to if this kind of
> data is available or where to look for or how to compute them? thanks,
>
> Best wishes,
>
> Junjie
More information about the Genome
mailing list