[Genome] Using Tables with custom tracks

Alexandre Blais Alexandre.Blais at uOttawa.ca
Sat Sep 15 10:06:13 PDT 2007


Hello UCSC team,

I am experiencing a problem using Tables with my own custom tracks.

My goal is to get genomic sequence for a bunch of genomic coordinates.

I am uploading the coordinates as custom tracks.

So under "Tables", my approach is to select "sequence output", and
choose the following:

Group: Custom tracks

Track: User track

Table: ct_UserTrack

 

And enter the names of my tracks there.

When I click on "paste list", I get the following message:

"Can't start query: describe ct_UserTrack 

mySQL error 1146: Table 'hg18.ct_UserTrack' doesn't exist"

 

What I am doing wrong?

I double checked to make sure I am looking in the same assembly I
uploaded the tracks in.

I can see the entries of my custom tracks just fine, in the browser...

I am assuming I don't have to intersect or create any filter.

 

I tried with various genome assemblies, and I get the same message in
all cases.

I am afraid I am doing something completely wrong...

Thanks much for your help!

 

Alex



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