[Genome] Identifying UTR with table browser

[Kevin A. Peterson]

Hi,
I have a positional table that contains the coordinates for 
regulatory module predictions across Mmu2. I am trying to prioritize 
and classify them using the table browser. Specifically, I would like 
to know how many overlap with known genes and what part of the gene 
they map to (e.g. 5' UTR, 3'UTR or coding exon). I have done the 
intersection with the known genes track but is it possible to 
determine what part of the gene it overlaps with from the BED record.

Thank you in advance for any advice you may be able to provide.

Kevin
-- 
Kevin A. Peterson
Graduate Research Assistant
Department of Biomedical Sciences
College of Veterinary Medicine
Veterinary Research Tower T3001 Box 16
Cornell University
Ithaca, NY 14853

kap59 at cornell.edu
fax: (607) 253-4495
phone: (607) 253-4122