[Genome] BACs from UCSC or TIGR

[Brooke Rhead]

Hello Clay,

The "Coverage" track details pages contain links to the complete
BAC sequences (the sections of the BACs that are considered part of the 
tiling path, anyway. Not all BACs were completely sequenced.)

For example, if you turn on the Coverage track in the region of the 
KCNC2 gene (around chr12:73,720,163-73,889,778 in the Human, March 2006 
assembly), you should see four identifiers in the Coverage track:

AC073525.25
AC021190.5
AC130405.3
AC091534.7

The links on our details pages go to the full sequences.  Here is the 
link to the first identifier listed above:
http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nuccore&id=21954915

I hope this information is helpful.  If you have further questions, 
please feel free to contact us again.

--
Brooke Rhead
UCSC Genome Bioinformatics Group



Clay Matthews wrote:
> Hi, I would like to obtain the full sequence of the BACs 
> represented on the KCNC2 assembly at UCSC, but I can only 
> find the genome survey sequences associated with these. How 
> can I get the entire BAC sequence to perform my own 
> alignments? Any help you could provide would be greatly 
> appreciated. Cheers
> 
> 
> Clay Matthews
> 
> 
> Clay Matthews
> BSc. PhD.
> Research Officer
> Department of Genetic Medicine
> Women's and Children's Hospital
> North Adelaide
> South Australia
> Tele: +61 439 370997
>        
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