[Genome] forward and reverse ESTs

[Kayla Smith]

Hello Kavita,

While we don't have information about pairs of ESTs, we have clone
information in the gbCdnaInfo.mrnaClone column, which is a
relational link to the mrnaClone.id column.

If the clone is in IMAGE, the imageClone table has some information.

You may also wish to look into dbEST for this information:
http://www.ncbi.nlm.nih.gov/dbEST/

This should get you started.  I hope this information is helpful to you. 
  Please don't hesitate to contact us again if you require further 
assistance.

Kayla Smith
UCSC Genome Bioinformatics Group


K. Garg wrote:
> How can I find two ESTs (forward and reverse) which came from the same 
> clone ? Given an EST, how do I find its pair if it exists ?
> 
> thanks
> -kavita
> 
> 
> -----------------------------------------------------------------------
> Kavita Garg, Ph.D.                      Email: kavitag at u.washington.edu
> Dept of Genome Sciences,                Phone: 206-616-5051
> Box 357730                              Fax:   206-685-7301
> University of Washington  School of Medicine
> 1705 NE Pacific, Seattle, WA 98195-7730, USA
> -----------------------------------------------------------------------
> _______________________________________________
> Genome maillist  -  Genome at soe.ucsc.edu
> http://www.soe.ucsc.edu/mailman/listinfo/genome