[Genome] Multiple genome alignment

Shah, Jyoti K. jyoti_shah at merck.com
Wed Oct 10 17:41:07 PDT 2007


Dear UCSC team,

I have a question regarding your conservation track. I want to extract
the genomic region in mouse, rat and other species which align with the
corresponding genomic region in human species. 

When I use the human genome browser and Mouse chain track, I can see the
chromosome and coordinates in mouse species for certain human genomic
region. But I am unable to get the same information when I try the table
browser. Ideally, I would like to have a table which gives the following
fields:

Human chr 
Human genomic start
Human genomic end
Human sequence
Mouse chr
Mouse genomic start
Mouse genomic end
Mouse sequence

Is it possible to extract the above using your table browser? It would
be great if you could help me with this.

Thanks
Jyoti


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