[Genome] non-redundant list of genes

Brooke Rhead rhead at soe.ucsc.edu
Wed Nov 28 11:49:53 PST 2007


Hello Katie,

There is a table associated with the UCSC Genes track called 
'knownCanonical' that contains only one splice variant for each gene. 
If you select the UCSC Genes track in the Table Browser, it will be in 
the list of tables.

If you need help using the table, please feel free to contact us again 
at this mailing list address.

--
Brooke Rhead
UCSC Genome Bioinformatics Group


Katie Rudd wrote:
> Hi UCSC,
> 
> Is there a way to get a non-redundant list of genes for a given region?  I
> tried using the table browser, but I don't see a way to eliminate splice
> variants of the same gene.  I would like to make a non-redundant list
> including reviewed (dark) RefSeq genes and the black UCSC genes.
> 
> Thanks,
> Katie Rudd
> 
> _______________________________________________
> Genome maillist  -  Genome at soe.ucsc.edu
> http://www.soe.ucsc.edu/mailman/listinfo/genome


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