[Genome] Precomputed TFBS for mouse

[Kayla Smith]

Hello Diego,

We do not have any plans to create a TFBS track for the mouse.  One 
thing you might try is our liftOver utility 
(http://genome.ucsc.edu/cgi-bin/hgLiftOver), to convert human TFBS 
coordinates to mouse coordinates.

The details page from the human TFBS track has detailed information on 
the generation of this track, and a link to Biobase, which might be 
useful to look into: 
http://genome.ucsc.edu/cgi-bin/hgTrackUi?g=tfbsConsSites

I hope this information is helpful to you.  Please don't hesitate to 
contact us again if you require further assistance.

Kayla Smith
UCSC Genome Bioinformatics Group


Diego Miranda wrote:
> Hello,
> 
> I am in need of the precomputed TFBS for the mouse genome (same format as 
> they are provided for the human genome). I guess they are not available on 
> the UCSC Genome Browser....would you have them somewhere for me, please?
> 
> Thanks a lot for your help.
> 
> With best wishes from Cambridge,
> 
> diego
> 
>